RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	TMEM144	Q7Z5S9	345 aa		3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	CCDC190	Q86UF4	302 aa		3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	LRTM2	Q8N967	370 aa		3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	ZNF738	Q8NE65	137 aa		3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	DYNC2LI1	Q8TCX1	351 aa		3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	RXFP4	Q8TDU9	374 aa		3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	LINC01587	Q99440	93 aa		3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	GGACT	Q9BVM4	153 aa		3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	WDR12	Q9GZL7	423 aa	Known RBP	3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	NAA50	Q9GZZ1	169 aa	Known RBP	3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	C20orf85	Q9H1P6	137 aa		3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	MIXL1	Q9H2W2	232 aa		3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	DPH3P1	Q9H4G8	78 aa		3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	NDUFA13	Q9P0J0	144 aa		3.6	□□□□□ -1.83
SEC13-219	ENST00000492602	TRAV9-2	A0A087WT02	112 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	LRCOL1	A6NCL2	159 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	FNDC10	F2Z333	226 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602		H3BMQ9	156 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	ZNF701	M0R085	212 aa	Predicted RBP	3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	COX7A2P2	O60397	106 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	PRM2	P04554	102 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	HTN1	P15515	57 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	BCAP31	P51572	246 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	TAS2R30	P59541	319 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	HBG1	P69891	147 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	HBG2	P69892	147 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	GUK1	Q16774	197 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	ZNF493	Q6ZR52	646 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602		Q6ZRU5	148 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	ZNF546	Q86UE3	836 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	BPIFA4P	Q86YQ2	179 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	C1orf158	Q8N1D5	194 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	THAP8	Q8NA92	274 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	OR1L4	Q8NGR5	311 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	LHFPL5	Q8TAF8	219 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	CIRBP-AS1	Q8TBR5	109 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	SMIM8	Q96KF7	97 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	IGF2BP2-AS1	Q96M15	143 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	CHAC1	Q9BUX1	264 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	MSRB1	Q9NZV6	116 aa		3.59	□□□□□ -1.83
SEC13-219	ENST00000492602	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	3.59	□□□□□ -1.83
SEC13-219	ENST00000492602		A0A0J9YX75	114 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	C5orf51	A6NDU8	294 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	FAM25E	A8MYX2	175 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	SSSCA1	O60232	199 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	TSC22D2	O75157	780 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	NXPH4	O95158	308 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	SCGB1D2	O95969	90 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	CXCL2	P19875	107 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	M6PR	P20645	277 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	S100A11	P31949	105 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	PAX9	P55771	341 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	PPP1R1A	Q13522	171 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	IAH1	Q2TAA2	248 aa	Predicted RBP	3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	GDF5OS	Q5U4N7	250 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	MZT2B	Q6NZ67	158 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	CYP2G1P	Q6ZSU1	146 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	STX12	Q86Y82	276 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	ZNF709	Q8N972	641 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	PFDN5	Q99471	154 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	SOST	Q9BQB4	213 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	SLIRP	Q9GZT3	109 aa	Known RBP	3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	ARL6	Q9H0F7	186 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	TIMM9	Q9Y5J7	89 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	PXMP4	Q9Y6I8	212 aa		3.58	□□□□□ -1.84
SEC13-219	ENST00000492602	LINC00854	A0A1B0GVQ3	168 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	C9orf170	A2RU37	121 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	ZNF705G	A8MUZ8	300 aa	Predicted RBP	3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	SNURFL	B1AK76	121 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	PITX3	O75364	302 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	NDUFB6	O95139	128 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	IGLV2-11	P01706	119 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	OR4E1	P0C645	316 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	LINC00869	P0C866	280 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	SMIM18	P0DKX4	95 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	HOXA5	P20719	270 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	CSN1S1	P47710	185 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	CAV2	P51636	162 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	TAS2R60	P59551	318 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	RRAS2	P62070	204 aa	Predicted RBP	3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	HIST1H1A	Q02539	215 aa	Predicted RBP	3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	ZNF79	Q15937	498 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	PSG3	Q16557	428 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	ATP6V1F	Q16864	119 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	LINC01620	Q4KN68	170 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	C10orf113	Q5VZT2	155 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	LCN15	Q6UWW0	184 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	C16orf74	Q96GX8	76 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	C20orf144	Q9BQM9	153 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	SLC50A1	Q9BRV3	221 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	SHANK2-AS3	Q9BTD1	123 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	SLC35B3	Q9H1N7	401 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	AAMDC	Q9H7C9	122 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	GPN1	Q9HCN4	374 aa	Predicted RBP	3.57	□□□□□ -1.84
SEC13-219	ENST00000492602	PRR13	Q9NZ81	148 aa		3.57	□□□□□ -1.84
SEC13-219	ENST00000492602		H3BP45	60 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	BOLA2-SMG1P6	H3BVE0	249 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602		H7BYZ3	331 aa		3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms