RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 CCDC32Q9BV29 185 aa12.14□□□□□ -0.47
SGMS1-204ENST00000492601 PXMP4Q9Y6I8 212 aa12.14□□□□□ -0.47
SGMS1-204ENST00000492601 J3KRW8 73 aa12.13□□□□□ -0.47
SGMS1-204ENST00000492601 NUDT3O95989 172 aa12.13□□□□□ -0.47
SGMS1-204ENST00000492601 ATP5G1P05496 136 aa12.13□□□□□ -0.47
SGMS1-204ENST00000492601 ATP5G3P48201 142 aa12.13□□□□□ -0.47
SGMS1-204ENST00000492601 SULT1A1P50225 295 aa12.13□□□□□ -0.47
SGMS1-204ENST00000492601 BAXQ07812 192 aa12.13□□□□□ -0.47
SGMS1-204ENST00000492601 RAB32Q13637 225 aa12.13□□□□□ -0.47
SGMS1-204ENST00000492601 OR1L4Q8NGR5 311 aa12.13□□□□□ -0.47
SGMS1-204ENST00000492601 SAT2Q96F10 170 aaPredicted RBP12.13□□□□□ -0.47
SGMS1-204ENST00000492601 ATG101Q9BSB4 218 aa12.13□□□□□ -0.47
SGMS1-204ENST00000492601 NOP10Q9NPE3 64 aaKnown RBP12.13□□□□□ -0.47
SGMS1-204ENST00000492601 LYRM2Q9NU23 88 aaPredicted RBP12.13□□□□□ -0.47
SGMS1-204ENST00000492601 TIMM8BQ9Y5J9 83 aaPredicted RBP12.13□□□□□ -0.47
SGMS1-204ENST00000492601 CBY3A6NI87 242 aa12.12□□□□□ -0.47
SGMS1-204ENST00000492601 H7BYZ3 331 aa12.12□□□□□ -0.47
SGMS1-204ENST00000492601 VWC2Q2TAL6 325 aa12.12□□□□□ -0.47
SGMS1-204ENST00000492601 GFI1BQ5VTD9 330 aa12.12□□□□□ -0.47
SGMS1-204ENST00000492601 STX12Q86Y82 276 aa12.12□□□□□ -0.47
SGMS1-204ENST00000492601 TMEM252Q8N6L7 170 aa12.12□□□□□ -0.47
SGMS1-204ENST00000492601 PFDN5Q99471 154 aa12.12□□□□□ -0.47
SGMS1-204ENST00000492601 SLC39A9Q9NUM3 307 aa12.12□□□□□ -0.47
SGMS1-204ENST00000492601 S100A11P31949 105 aa12.11□□□□□ -0.47
SGMS1-204ENST00000492601 RPL29P47914 159 aaKnown RBP12.11□□□□□ -0.47
SGMS1-204ENST00000492601 IL15RAQ13261 267 aa12.11□□□□□ -0.47
SGMS1-204ENST00000492601 ZNF493Q6ZR52 646 aa12.11□□□□□ -0.47
SGMS1-204ENST00000492601 RNASE8Q8TDE3 154 aaKnown RBP12.11□□□□□ -0.47
SGMS1-204ENST00000492601 TMEM263Q8WUH6 116 aaKnown RBP12.11□□□□□ -0.47
SGMS1-204ENST00000492601 ZNF586Q9NXT0 402 aa12.11□□□□□ -0.47
SGMS1-204ENST00000492601 CT45A10P0DMU9 189 aa12.1□□□□□ -0.47
SGMS1-204ENST00000492601 FGF7P21781 194 aa12.1□□□□□ -0.47
SGMS1-204ENST00000492601 HBG1P69891 147 aa12.1□□□□□ -0.47
SGMS1-204ENST00000492601 HBG2P69892 147 aa12.1□□□□□ -0.47
SGMS1-204ENST00000492601 GUK1Q16774 197 aa12.1□□□□□ -0.47
SGMS1-204ENST00000492601 MZT2BQ6NZ67 158 aa12.1□□□□□ -0.47
SGMS1-204ENST00000492601 GPN1Q9HCN4 374 aaPredicted RBP12.1□□□□□ -0.47
SGMS1-204ENST00000492601 TRAV12-3A0A0B4J271 114 aa12.09□□□□□ -0.47
SGMS1-204ENST00000492601 SOHLH1Q5JUK2 328 aa12.09□□□□□ -0.47
SGMS1-204ENST00000492601 C1orf134Q5TEV5 83 aa12.09□□□□□ -0.47
SGMS1-204ENST00000492601 C20orf144Q9BQM9 153 aa12.09□□□□□ -0.47
SGMS1-204ENST00000492601 NPIPB6E9PJ23 425 aa12.08□□□□□ -0.48
SGMS1-204ENST00000492601 SIX6O95475 246 aa12.08□□□□□ -0.48
SGMS1-204ENST00000492601 CCDC28AQ8IWP9 274 aa12.08□□□□□ -0.48
SGMS1-204ENST00000492601 RNF141Q8WVD5 230 aa12.08□□□□□ -0.48
SGMS1-204ENST00000492601 M0R3E3 92 aa12.07□□□□□ -0.48
SGMS1-204ENST00000492601 PYYP10082 97 aa12.07□□□□□ -0.48
SGMS1-204ENST00000492601 LEPP41159 167 aa12.07□□□□□ -0.48
SGMS1-204ENST00000492601 FAM3BP58499 235 aaPredicted RBP12.07□□□□□ -0.48
SGMS1-204ENST00000492601 NHLH2Q02577 135 aa12.07□□□□□ -0.48
SGMS1-204ENST00000492601 ASAH1Q13510 395 aa12.07□□□□□ -0.48
SGMS1-204ENST00000492601 OR5I1Q13606 314 aa12.07□□□□□ -0.48
SGMS1-204ENST00000492601 ATP6V1FQ16864 119 aa12.07□□□□□ -0.48
SGMS1-204ENST00000492601 GCSAMLQ5JQS6 135 aa12.07□□□□□ -0.48
SGMS1-204ENST00000492601 PCLOQ9Y6V0 5065 aa12.07□□□□□ -0.48
SGMS1-204ENST00000492601 TRBV19A0A075B6N1 114 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 SNURFLB1AK76 121 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 ZNF253O75346 499 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 CCL18P55774 89 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 ERCC8Q13216 396 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 ZNRF2Q8NHG8 242 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 THAP6Q8TBB0 222 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 ENKURQ8TC29 256 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 CHAC2Q8WUX2 184 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 BLNKQ8WV28 456 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 S100ZQ8WXG8 99 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 NPCDR1Q9BY65 106 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 TMEM14CQ9P0S9 112 aa12.06□□□□□ -0.48
SGMS1-204ENST00000492601 GAGE12BA1L429 117 aa12.05□□□□□ -0.48
SGMS1-204ENST00000492601 GAGE7O76087 117 aa12.05□□□□□ -0.48
SGMS1-204ENST00000492601 NDUFB4O95168 129 aa12.05□□□□□ -0.48
SGMS1-204ENST00000492601 GAGE12FP0CL80 117 aa12.05□□□□□ -0.48
SGMS1-204ENST00000492601 GAGE12GP0CL81 117 aa12.05□□□□□ -0.48
SGMS1-204ENST00000492601 GAGE12IP0CL82 117 aa12.05□□□□□ -0.48
SGMS1-204ENST00000492601 HIST1H1EP10412 219 aaKnown RBP12.05□□□□□ -0.48
SGMS1-204ENST00000492601 ODF3Q96PU9 254 aa12.05□□□□□ -0.48
SGMS1-204ENST00000492601 LINC00588Q9Y4M8 146 aa12.05□□□□□ -0.48
SGMS1-204ENST00000492601 TIMM9Q9Y5J7 89 aa12.05□□□□□ -0.48
SGMS1-204ENST00000492601 TRAV26-1A0A087WT03 109 aa12.04□□□□□ -0.48
SGMS1-204ENST00000492601 A0A0J9YY99 117 aa12.04□□□□□ -0.48
SGMS1-204ENST00000492601 NBDYA0A0U1RRE5 68 aa12.04□□□□□ -0.48
SGMS1-204ENST00000492601 MPDU1O75352 247 aa12.04□□□□□ -0.48
SGMS1-204ENST00000492601 RLN2P04090 185 aa12.04□□□□□ -0.48
SGMS1-204ENST00000492601 MED14OSP0DP75 135 aa12.04□□□□□ -0.48
SGMS1-204ENST00000492601 CLINT1Q14677 625 aa12.04□□□□□ -0.48
SGMS1-204ENST00000492601 LRRC37A5PQ49AS3 106 aa12.04□□□□□ -0.48
SGMS1-204ENST00000492601 LINC00299Q6ZSB3 139 aa12.04□□□□□ -0.48
SGMS1-204ENST00000492601 EXOC3-AS1Q8N2X6 119 aa12.04□□□□□ -0.48
SGMS1-204ENST00000492601 LINC00612Q8N6U2 182 aa12.04□□□□□ -0.48
SGMS1-204ENST00000492601 OR5C1Q8NGR4 320 aa12.04□□□□□ -0.48
SGMS1-204ENST00000492601 MRPL53Q96EL3 112 aaKnown RBP12.04□□□□□ -0.48
SGMS1-204ENST00000492601 HOXA5P20719 270 aa12.03□□□□□ -0.48
SGMS1-204ENST00000492601 SSX7Q7RTT5 188 aa12.03□□□□□ -0.48
SGMS1-204ENST00000492601 GNPNAT1Q96EK6 184 aaPredicted RBP12.03□□□□□ -0.48
SGMS1-204ENST00000492601 PYGO2Q9BRQ0 406 aa12.03□□□□□ -0.48
SGMS1-204ENST00000492601 SLC25A2Q9BXI2 301 aa12.03□□□□□ -0.48
SGMS1-204ENST00000492601 OR5AC2Q9NZP5 309 aa12.03□□□□□ -0.48
SGMS1-204ENST00000492601 RYR1P21817 5038 aa12.03□□□□□ -0.48
SGMS1-204ENST00000492601 C7orf71A4D174 169 aa12.02□□□□□ -0.49
SGMS1-204ENST00000492601 E5RGE8 158 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms