RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 SURF2Q15527 256 aaPredicted RBP9.09□□□□□ -0.95
USF1-206ENST00000491629 SAMD13Q5VXD3 122 aa9.09□□□□□ -0.95
USF1-206ENST00000491629 C12orf45Q8N5I9 185 aaPredicted RBP9.09□□□□□ -0.95
USF1-206ENST00000491629 RXFP4Q8TDU9 374 aa9.09□□□□□ -0.95
USF1-206ENST00000491629 ASB13Q8WXK3 278 aa9.09□□□□□ -0.95
USF1-206ENST00000491629 IL22RA2Q969J5 263 aa9.09□□□□□ -0.95
USF1-206ENST00000491629 GNPNAT1Q96EK6 184 aaPredicted RBP9.09□□□□□ -0.95
USF1-206ENST00000491629 MRPS16Q9Y3D3 137 aaKnown RBP9.09□□□□□ -0.95
USF1-206ENST00000491629 TIMM8BQ9Y5J9 83 aaPredicted RBP9.09□□□□□ -0.95
USF1-206ENST00000491629 GIPP09681 153 aaPredicted RBP9.08□□□□□ -0.96
USF1-206ENST00000491629 HTN1P15515 57 aa9.08□□□□□ -0.96
USF1-206ENST00000491629 CCR6P51684 374 aa9.08□□□□□ -0.96
USF1-206ENST00000491629 KRTAP10-1P60331 282 aa9.08□□□□□ -0.96
USF1-206ENST00000491629 RAP2BP61225 183 aa9.08□□□□□ -0.96
USF1-206ENST00000491629 OR5I1Q13606 314 aa9.08□□□□□ -0.96
USF1-206ENST00000491629 ZNF503Q96F45 646 aa9.08□□□□□ -0.96
USF1-206ENST00000491629 C16orf74Q96GX8 76 aa9.08□□□□□ -0.96
USF1-206ENST00000491629 SLC45A2Q9UMX9 530 aa9.08□□□□□ -0.96
USF1-206ENST00000491629 A0A0B4J2A0 478 aa9.07□□□□□ -0.96
USF1-206ENST00000491629 G3V3Q6 166 aa9.07□□□□□ -0.96
USF1-206ENST00000491629 GABARAPH6UMI1 98 aa9.07□□□□□ -0.96
USF1-206ENST00000491629 PITX3O75364 302 aa9.07□□□□□ -0.96
USF1-206ENST00000491629 RLN2P04090 185 aa9.07□□□□□ -0.96
USF1-206ENST00000491629 DNLZQ5SXM8 178 aa9.07□□□□□ -0.96
USF1-206ENST00000491629 TMEM256Q8N2U0 113 aa9.07□□□□□ -0.96
USF1-206ENST00000491629 OR8A1Q8NGG7 326 aa9.07□□□□□ -0.96
USF1-206ENST00000491629 OR4D5Q8NGN0 318 aa9.07□□□□□ -0.96
USF1-206ENST00000491629 OR1B1Q8NGR6 318 aa9.07□□□□□ -0.96
USF1-206ENST00000491629 SHPKQ9UHJ6 478 aa9.07□□□□□ -0.96
USF1-206ENST00000491629 TNFRSF18Q9Y5U5 241 aa9.07□□□□□ -0.96
USF1-206ENST00000491629 FAM74A7A6NL05 159 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 L7N2F9 121 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 EIF3GO75821 320 aaKnown RBP eCLIP9.06□□□□□ -0.96
USF1-206ENST00000491629 IAPPP10997 89 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 ORM2P19652 201 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 ATP5IP56385 69 aaPredicted RBP9.06□□□□□ -0.96
USF1-206ENST00000491629 HIST1H1AQ02539 215 aaPredicted RBP9.06□□□□□ -0.96
USF1-206ENST00000491629 FAM74A3Q4VXF1 159 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 LBHQ53QV2 105 aaPredicted RBP9.06□□□□□ -0.96
USF1-206ENST00000491629 ATRAIDQ6UW56 229 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 TMEM144Q7Z5S9 345 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 ZNF738Q8NE65 137 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 OR51S1Q8NGJ8 323 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 OR1S1Q8NH92 325 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 TMEM263Q8WUH6 116 aaKnown RBP9.06□□□□□ -0.96
USF1-206ENST00000491629 MDFICQ9P1T7 246 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 CACFD1Q9UGQ2 172 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 DNAH8Q96JB1 4490 aa9.06□□□□□ -0.96
USF1-206ENST00000491629 RAB19A4D1S5 217 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 H3BRN7 92 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 APOC3P02656 99 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 SMR3BP02814 79 aaPredicted RBP9.05□□□□□ -0.96
USF1-206ENST00000491629 TCRBP04435 133 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 CXCL3P19876 107 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 PVALBP20472 110 aaPredicted RBP9.05□□□□□ -0.96
USF1-206ENST00000491629 BTCP35070 178 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 IL18Q14116 193 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 C10orf91Q5T1B1 145 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 GGNBP1Q5YKI7 109 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 ZNF493Q6ZR52 646 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 SVBPQ8N300 66 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 VSIG2Q96IQ7 327 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 PARD6GQ9BYG4 376 aaPredicted RBP9.05□□□□□ -0.96
USF1-206ENST00000491629 PGPEP1Q9NXJ5 209 aa9.05□□□□□ -0.96
USF1-206ENST00000491629 A0A096LPF7 62 aa9.04□□□□□ -0.96
USF1-206ENST00000491629 DISC1C4P0D8 188 aa9.04□□□□□ -0.96
USF1-206ENST00000491629 DNAH10OSP0CZ25 163 aa9.04□□□□□ -0.96
USF1-206ENST00000491629 S100A11P31949 105 aa9.04□□□□□ -0.96
USF1-206ENST00000491629 RAB5BP61020 215 aa9.04□□□□□ -0.96
USF1-206ENST00000491629 RHOBP62745 196 aa9.04□□□□□ -0.96
USF1-206ENST00000491629 SSBP1Q04837 148 aaKnown RBP9.04□□□□□ -0.96
USF1-206ENST00000491629 PSG3Q16557 428 aa9.04□□□□□ -0.96
USF1-206ENST00000491629 OR2T35Q8NGX2 323 aa9.04□□□□□ -0.96
USF1-206ENST00000491629 GPR82Q96P67 336 aa9.04□□□□□ -0.96
USF1-206ENST00000491629 GAGE12BA1L429 117 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 NAP1L6A6NFF2 107 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 H3BNG1 76 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 MRPS12O15235 138 aaKnown RBP9.03□□□□□ -0.96
USF1-206ENST00000491629 GAGE7O76087 117 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 IL5P05113 134 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 GAGE12FP0CL80 117 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 GAGE12GP0CL81 117 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 GAGE12IP0CL82 117 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 AKAIN1P0CW23 69 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 C4orf46Q504U0 113 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 BPIFCQ8NFQ6 507 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 OR10J6PQ8NGY7 276 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 SMIM4Q8WVI0 70 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 SHANK2-AS3Q9BTD1 123 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 NIT2Q9NQR4 276 aa9.03□□□□□ -0.96
USF1-206ENST00000491629 CARHSP1Q9Y2V2 147 aaKnown RBP9.03□□□□□ -0.96
USF1-206ENST00000491629 A0A087X0K7 114 aa9.02□□□□□ -0.97
USF1-206ENST00000491629 C5orf52A6NGY3 159 aa9.02□□□□□ -0.97
USF1-206ENST00000491629 H7BYZ3 331 aa9.02□□□□□ -0.97
USF1-206ENST00000491629 CTDSPLO15194 276 aa9.02□□□□□ -0.97
USF1-206ENST00000491629 NDUFS6O75380 124 aaKnown RBP9.02□□□□□ -0.97
USF1-206ENST00000491629 AKR1C4P17516 323 aa9.02□□□□□ -0.97
USF1-206ENST00000491629 CXCL2P19875 107 aa9.02□□□□□ -0.97
USF1-206ENST00000491629 CDKN1BP46527 198 aa9.02□□□□□ -0.97
USF1-206ENST00000491629 HAMPP81172 84 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms