RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 OR1L4Q8NGR5 311 aa12.91□□□□□ -0.34
SMIM4-205ENST00000491607 RNASE8Q8TDE3 154 aaKnown RBP12.91□□□□□ -0.34
SMIM4-205ENST00000491607 C2orf50Q96LR7 162 aa12.91□□□□□ -0.34
SMIM4-205ENST00000491607 PKHD1P08F94 4074 aa12.9□□□□□ -0.34
SMIM4-205ENST00000491607 UBE2L5PA0A1B0GUS4 154 aa12.9□□□□□ -0.34
SMIM4-205ENST00000491607 J3KRW8 73 aa12.9□□□□□ -0.34
SMIM4-205ENST00000491607 H2AFB2P0C5Z0 115 aa12.9□□□□□ -0.34
SMIM4-205ENST00000491607 MED14OSP0DP75 135 aa12.9□□□□□ -0.34
SMIM4-205ENST00000491607 BAXQ07812 192 aa12.9□□□□□ -0.34
SMIM4-205ENST00000491607 GFI1BQ5VTD9 330 aa12.9□□□□□ -0.34
SMIM4-205ENST00000491607 CCDC28AQ8IWP9 274 aa12.9□□□□□ -0.34
SMIM4-205ENST00000491607 PFDN5Q99471 154 aa12.9□□□□□ -0.34
SMIM4-205ENST00000491607 C20orf144Q9BQM9 153 aa12.9□□□□□ -0.34
SMIM4-205ENST00000491607 WDR83OSQ9Y284 106 aa12.9□□□□□ -0.34
SMIM4-205ENST00000491607 GUK1Q16774 197 aa12.89□□□□□ -0.35
SMIM4-205ENST00000491607 SAT2Q96F10 170 aaPredicted RBP12.89□□□□□ -0.35
SMIM4-205ENST00000491607 C11orf1Q9H5F2 150 aa12.89□□□□□ -0.35
SMIM4-205ENST00000491607 S100A11P31949 105 aa12.88□□□□□ -0.35
SMIM4-205ENST00000491607 SULT1A1P50225 295 aa12.88□□□□□ -0.35
SMIM4-205ENST00000491607 CCL18P55774 89 aa12.88□□□□□ -0.35
SMIM4-205ENST00000491607 STX12Q86Y82 276 aa12.88□□□□□ -0.35
SMIM4-205ENST00000491607 RNF141Q8WVD5 230 aa12.88□□□□□ -0.35
SMIM4-205ENST00000491607 LYRM2Q9NU23 88 aaPredicted RBP12.88□□□□□ -0.35
SMIM4-205ENST00000491607 SLC39A9Q9NUM3 307 aa12.88□□□□□ -0.35
SMIM4-205ENST00000491607 NDUFA13Q9P0J0 144 aa12.88□□□□□ -0.35
SMIM4-205ENST00000491607 PKD1P98161 4303 aa12.88□□□□□ -0.35
SMIM4-205ENST00000491607 IGSF23A1L1A6 192 aa12.87□□□□□ -0.35
SMIM4-205ENST00000491607 CT45A10P0DMU9 189 aa12.87□□□□□ -0.35
SMIM4-205ENST00000491607 LEPP41159 167 aa12.87□□□□□ -0.35
SMIM4-205ENST00000491607 RPL29P47914 159 aaKnown RBP12.87□□□□□ -0.35
SMIM4-205ENST00000491607 HBG1P69891 147 aa12.87□□□□□ -0.35
SMIM4-205ENST00000491607 HBG2P69892 147 aa12.87□□□□□ -0.35
SMIM4-205ENST00000491607 OR5I1Q13606 314 aa12.87□□□□□ -0.35
SMIM4-205ENST00000491607 RAB32Q13637 225 aa12.87□□□□□ -0.35
SMIM4-205ENST00000491607 CLINT1Q14677 625 aa12.87□□□□□ -0.35
SMIM4-205ENST00000491607 VWC2Q2TAL6 325 aa12.87□□□□□ -0.35
SMIM4-205ENST00000491607 ZNRF2Q8NHG8 242 aa12.87□□□□□ -0.35
SMIM4-205ENST00000491607 CCDC32Q9BV29 185 aa12.87□□□□□ -0.35
SMIM4-205ENST00000491607 ZNF586Q9NXT0 402 aa12.87□□□□□ -0.35
SMIM4-205ENST00000491607 NACAE9PAV3 2078 aa12.86□□□□□ -0.35
SMIM4-205ENST00000491607 TRAV12-3A0A0B4J271 114 aa12.86□□□□□ -0.35
SMIM4-205ENST00000491607 NBDYA0A0U1RRE5 68 aa12.86□□□□□ -0.35
SMIM4-205ENST00000491607 FAM240BA0A1B0GVZ2 78 aa12.86□□□□□ -0.35
SMIM4-205ENST00000491607 SNURFLB1AK76 121 aa12.86□□□□□ -0.35
SMIM4-205ENST00000491607 RLN2P04090 185 aa12.86□□□□□ -0.35
SMIM4-205ENST00000491607 FGF7P21781 194 aa12.86□□□□□ -0.35
SMIM4-205ENST00000491607 TMEM252Q8N6L7 170 aa12.86□□□□□ -0.35
SMIM4-205ENST00000491607 GAGE12BA1L429 117 aa12.85□□□□□ -0.35
SMIM4-205ENST00000491607 NPIPB6E9PJ23 425 aa12.85□□□□□ -0.35
SMIM4-205ENST00000491607 GAGE7O76087 117 aa12.85□□□□□ -0.35
SMIM4-205ENST00000491607 GAGE12FP0CL80 117 aa12.85□□□□□ -0.35
SMIM4-205ENST00000491607 GAGE12GP0CL81 117 aa12.85□□□□□ -0.35
SMIM4-205ENST00000491607 GAGE12IP0CL82 117 aa12.85□□□□□ -0.35
SMIM4-205ENST00000491607 GPN1Q9HCN4 374 aaPredicted RBP12.85□□□□□ -0.35
SMIM4-205ENST00000491607 LINC00588Q9Y4M8 146 aa12.85□□□□□ -0.35
SMIM4-205ENST00000491607 TRAV26-1A0A087WT03 109 aa12.84□□□□□ -0.35
SMIM4-205ENST00000491607 SSX7Q7RTT5 188 aa12.84□□□□□ -0.35
SMIM4-205ENST00000491607 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
SMIM4-205ENST00000491607 GNPNAT1Q96EK6 184 aaPredicted RBP12.84□□□□□ -0.35
SMIM4-205ENST00000491607 ODF3Q96PU9 254 aa12.84□□□□□ -0.35
SMIM4-205ENST00000491607 TRBV19A0A075B6N1 114 aa12.83□□□□□ -0.36
SMIM4-205ENST00000491607 A0A0J9YY99 117 aa12.83□□□□□ -0.36
SMIM4-205ENST00000491607 M0R3E3 92 aa12.83□□□□□ -0.36
SMIM4-205ENST00000491607 ZNF253O75346 499 aa12.83□□□□□ -0.36
SMIM4-205ENST00000491607 M6PRP20645 277 aa12.83□□□□□ -0.36
SMIM4-205ENST00000491607 IL15RAQ13261 267 aa12.83□□□□□ -0.36
SMIM4-205ENST00000491607 ATP6V1FQ16864 119 aa12.83□□□□□ -0.36
SMIM4-205ENST00000491607 MZT2BQ6NZ67 158 aa12.83□□□□□ -0.36
SMIM4-205ENST00000491607 C6orf223Q8N319 242 aa12.83□□□□□ -0.36
SMIM4-205ENST00000491607 TIMM9Q9Y5J7 89 aa12.83□□□□□ -0.36
SMIM4-205ENST00000491607 DNAH11Q96DT5 4516 aa12.82□□□□□ -0.36
SMIM4-205ENST00000491607 PYYP10082 97 aa12.82□□□□□ -0.36
SMIM4-205ENST00000491607 HOXA5P20719 270 aa12.82□□□□□ -0.36
SMIM4-205ENST00000491607 ERCC8Q13216 396 aa12.82□□□□□ -0.36
SMIM4-205ENST00000491607 LINC00612Q8N6U2 182 aa12.82□□□□□ -0.36
SMIM4-205ENST00000491607 BLNKQ8WV28 456 aa12.82□□□□□ -0.36
SMIM4-205ENST00000491607 PYGO2Q9BRQ0 406 aa12.82□□□□□ -0.36
SMIM4-205ENST00000491607 TMEM14CQ9P0S9 112 aa12.82□□□□□ -0.36
SMIM4-205ENST00000491607 DYNC1H1Q14204 4646 aaKnown RBP12.82□□□□□ -0.36
SMIM4-205ENST00000491607 PCLOQ9Y6V0 5065 aa12.82□□□□□ -0.36
SMIM4-205ENST00000491607 SLC25A5P05141 298 aaKnown RBP12.81□□□□□ -0.36
SMIM4-205ENST00000491607 TNP2Q05952 138 aa12.81□□□□□ -0.36
SMIM4-205ENST00000491607 CHAC2Q8WUX2 184 aa12.81□□□□□ -0.36
SMIM4-205ENST00000491607 MRPL53Q96EL3 112 aaKnown RBP12.81□□□□□ -0.36
SMIM4-205ENST00000491607 NPCDR1Q9BY65 106 aa12.81□□□□□ -0.36
SMIM4-205ENST00000491607 MPDU1O75352 247 aa12.8□□□□□ -0.36
SMIM4-205ENST00000491607 NDUFB4O95168 129 aa12.8□□□□□ -0.36
SMIM4-205ENST00000491607 HIST1H1EP10412 219 aaKnown RBP12.8□□□□□ -0.36
SMIM4-205ENST00000491607 GCSAMLQ5JQS6 135 aa12.8□□□□□ -0.36
SMIM4-205ENST00000491607 EXOC3-AS1Q8N2X6 119 aa12.8□□□□□ -0.36
SMIM4-205ENST00000491607 THAP6Q8TBB0 222 aa12.8□□□□□ -0.36
SMIM4-205ENST00000491607 RXFP4Q8TDU9 374 aa12.8□□□□□ -0.36
SMIM4-205ENST00000491607 AAMDCQ9H7C9 122 aa12.8□□□□□ -0.36
SMIM4-205ENST00000491607 PRELID1Q9Y255 219 aa12.8□□□□□ -0.36
SMIM4-205ENST00000491607 C7orf71A4D174 169 aa12.79□□□□□ -0.36
SMIM4-205ENST00000491607 NHLH2Q02577 135 aa12.79□□□□□ -0.36
SMIM4-205ENST00000491607 PDE6HQ13956 83 aa12.79□□□□□ -0.36
SMIM4-205ENST00000491607 Q6ZTI0 123 aa12.79□□□□□ -0.36
SMIM4-205ENST00000491607 OR5C1Q8NGR4 320 aa12.79□□□□□ -0.36
SMIM4-205ENST00000491607 TMPRSS5Q9H3S3 457 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms