RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 ZNF471Q9BX82 626 aaPredicted RBP7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 SMIM3Q9BZL3 60 aa7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 WDR61Q9GZS3 305 aaKnown RBP7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 NPVFQ9HCQ7 196 aa7.83□□□□□ -1.16
CLCNKA-206ENST00000491433 BORCS7-ASMTA0A0B4J1R7 106 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 A0A1W2PPQ1 181 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 IGKV3-20P01619 116 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 FXYD7P58549 80 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 B2MP61769 119 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 PSG9Q00887 426 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 GAMTQ14353 236 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 OR8G2PQ6IF36 304 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 ETFRF1Q6IPR1 90 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 EBLN2Q6P2I7 272 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 TMEM144Q7Z5S9 345 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 PSMG3Q9BT73 122 aaPredicted RBP7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 TMEM208Q9BTX3 173 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 TIMM9Q9Y5J7 89 aa7.82□□□□□ -1.16
CLCNKA-206ENST00000491433 IGKV1OR2-108A0A075B7D4 117 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 BUB3O43684 328 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 MPDU1O75352 247 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 IL4P05112 153 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 ATP6V0CP27449 155 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 PSMB3P49720 205 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 SAMD13Q5VXD3 122 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 ZNF709Q8N972 641 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 THAP8Q8NA92 274 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 OR2G3Q8NGZ4 309 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 Q9H8V8 135 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 UQCC1Q9NVA1 299 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 MRPL36Q9P0J6 103 aaKnown RBP7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 LINC00588Q9Y4M8 146 aa7.81□□□□□ -1.16
CLCNKA-206ENST00000491433 IGKV1D-37A0A075B6S9 117 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 F5H768 121 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 EREGO14944 169 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 ATP5G1P05496 136 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 IGLC1P0CG04 106 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 OR10J1P30954 320 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 ATP5G3P48201 142 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 KRTAP10-2P60368 255 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 SERF2P84101 59 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 USF2Q15853 346 aaPredicted RBP7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 GDF5OSQ5U4N7 250 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 C1orf158Q8N1D5 194 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 LYPD1Q8N2G4 141 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 GNPNAT1Q96EK6 184 aaPredicted RBP7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 LINC00052Q96N35 136 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 PGPEP1Q9NXJ5 209 aa7.8□□□□□ -1.16
CLCNKA-206ENST00000491433 TOMM40O96008 361 aa7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 IFNA7P01567 189 aa7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 IFNA5P01569 189 aa7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 RD3LP0DJH9 198 aa7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 PRB4P10163 310 aaPredicted RBP7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 SULT1A2P50226 295 aa7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 RND2P52198 227 aa7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 EIF5AL1Q6IS14 154 aaKnown RBP7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 SSX7Q7RTT5 188 aa7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 IGF2BP2-AS1Q96M15 143 aa7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 MGST2Q99735 147 aa7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 Q9H3A6 140 aa7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 SLC45A2Q9UMX9 530 aa7.79□□□□□ -1.16
CLCNKA-206ENST00000491433 CBY3A6NI87 242 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 ISLRO14498 428 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 LINC00869P0C866 280 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 DEFB130BP0DP73 79 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 DEFB130AP0DP74 79 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 TSPOP30536 169 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 RPL29P47914 159 aaKnown RBP7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 CLLU1Q5K131 121 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 FAM78BQ5VT40 261 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 CDPF1Q6NVV7 123 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 TEPPQ6URK8 271 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 ALKAL2Q6UX46 152 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 HSD17B11Q8NBQ5 300 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 LYPD6BQ8NI32 183 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 SCGB1C1Q8TD33 95 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 NPCDR1Q9BY65 106 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 SLC35B3Q9H1N7 401 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 SH3BGRL3Q9H299 93 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 SLC25A32Q9H2D1 315 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 RPRMQ9NS64 109 aa7.78□□□□□ -1.16
CLCNKA-206ENST00000491433 A0A0J9YX75 114 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 UBE2L5PA0A1B0GUS4 154 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 UMAD1C9J7I0 102 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 AGPAT2O15120 278 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 MEOX2P50222 304 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 RAB5CP51148 216 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 C1orf194Q5T5A4 169 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 OR51G1Q8NGK1 321 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 LRRC20Q8TCA0 184 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 TMED6Q8WW62 240 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 NPIPB3Q92617 1050 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 SAT2Q96F10 170 aaPredicted RBP7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 TRGV9Q99603 122 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 UPK3BQ9BT76 320 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 RSG1Q9BU20 258 aa7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 PAIP2BQ9ULR5 123 aaKnown RBP7.77□□□□□ -1.17
CLCNKA-206ENST00000491433 KRTAP29-1A8MX34 341 aaPredicted RBP7.76□□□□□ -1.17
CLCNKA-206ENST00000491433 INSP01308 110 aa7.76□□□□□ -1.17
CLCNKA-206ENST00000491433 NMBP08949 121 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms