RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 TRAV5A0A0B4J249 113 aa10.98□□□□□ -0.65
SMPD4-220ENST00000491319 C5orf51A6NDU8 294 aa10.98□□□□□ -0.65
SMPD4-220ENST00000491319 FAM24AA6NFZ4 105 aa10.98□□□□□ -0.65
SMPD4-220ENST00000491319 J3KRW8 73 aa10.98□□□□□ -0.65
SMPD4-220ENST00000491319 TCRBP04435 133 aa10.98□□□□□ -0.65
SMPD4-220ENST00000491319 SAT2Q96F10 170 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-220ENST00000491319 C20orf144Q9BQM9 153 aa10.98□□□□□ -0.65
SMPD4-220ENST00000491319 NUDT15Q9NV35 164 aa10.98□□□□□ -0.65
SMPD4-220ENST00000491319 PXMP4Q9Y6I8 212 aa10.98□□□□□ -0.65
SMPD4-220ENST00000491319 NBDYA0A0U1RRE5 68 aa10.97□□□□□ -0.65
SMPD4-220ENST00000491319 UBE2L5PA0A1B0GUS4 154 aa10.97□□□□□ -0.65
SMPD4-220ENST00000491319 CCL18P55774 89 aa10.97□□□□□ -0.65
SMPD4-220ENST00000491319 TNP2Q05952 138 aa10.97□□□□□ -0.65
SMPD4-220ENST00000491319 Q6ZRG5 221 aa10.97□□□□□ -0.65
SMPD4-220ENST00000491319 ZNF431Q8TF32 576 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-220ENST00000491319 DNAJC4Q9NNZ3 241 aa10.97□□□□□ -0.65
SMPD4-220ENST00000491319 UQCC1Q9NVA1 299 aa10.97□□□□□ -0.65
SMPD4-220ENST00000491319 WDR83OSQ9Y284 106 aa10.97□□□□□ -0.65
SMPD4-220ENST00000491319 LINC00588Q9Y4M8 146 aa10.97□□□□□ -0.65
SMPD4-220ENST00000491319 S100A10P60903 97 aa10.96□□□□□ -0.65
SMPD4-220ENST00000491319 RAB31Q13636 194 aa10.96□□□□□ -0.65
SMPD4-220ENST00000491319 LINC00612Q8N6U2 182 aa10.96□□□□□ -0.65
SMPD4-220ENST00000491319 ZNF586Q9NXT0 402 aa10.96□□□□□ -0.65
SMPD4-220ENST00000491319 IGSF23A1L1A6 192 aa10.95□□□□□ -0.66
SMPD4-220ENST00000491319 CT45A10P0DMU9 189 aa10.95□□□□□ -0.66
SMPD4-220ENST00000491319 BAXQ07812 192 aa10.95□□□□□ -0.66
SMPD4-220ENST00000491319 VWC2Q2TAL6 325 aa10.95□□□□□ -0.66
SMPD4-220ENST00000491319 C6orf223Q8N319 242 aa10.95□□□□□ -0.66
SMPD4-220ENST00000491319 C12orf45Q8N5I9 185 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-220ENST00000491319 OR1L4Q8NGR5 311 aa10.95□□□□□ -0.66
SMPD4-220ENST00000491319 C2orf50Q96LR7 162 aa10.95□□□□□ -0.66
SMPD4-220ENST00000491319 PFDN5Q99471 154 aa10.95□□□□□ -0.66
SMPD4-220ENST00000491319 TRAV26-1A0A087WT03 109 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 TRAV12-3A0A0B4J271 114 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 GAGE12BA1L429 117 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 NPIPB6E9PJ23 425 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 GAGE7O76087 117 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 GAGE12FP0CL80 117 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 GAGE12GP0CL81 117 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 GAGE12IP0CL82 117 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 PVALBP20472 110 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-220ENST00000491319 LEPP41159 167 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 OR5I1Q13606 314 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 RAB32Q13637 225 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 CLINT1Q14677 625 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 GUK1Q16774 197 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 SSX7Q7RTT5 188 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 CCDC28AQ8IWP9 274 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 ODF3Q96PU9 254 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 LYRM2Q9NU23 88 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-220ENST00000491319 SLC39A9Q9NUM3 307 aa10.94□□□□□ -0.66
SMPD4-220ENST00000491319 A0A0J9YY99 117 aa10.93□□□□□ -0.66
SMPD4-220ENST00000491319 SNURFLB1AK76 121 aa10.93□□□□□ -0.66
SMPD4-220ENST00000491319 M0R3E3 92 aa10.93□□□□□ -0.66
SMPD4-220ENST00000491319 RLN2P04090 185 aa10.93□□□□□ -0.66
SMPD4-220ENST00000491319 HOXA5P20719 270 aa10.93□□□□□ -0.66
SMPD4-220ENST00000491319 RPL29P47914 159 aaKnown RBP10.93□□□□□ -0.66
SMPD4-220ENST00000491319 SULT1A1P50225 295 aa10.93□□□□□ -0.66
SMPD4-220ENST00000491319 TMEM252Q8N6L7 170 aa10.93□□□□□ -0.66
SMPD4-220ENST00000491319 GNPNAT1Q96EK6 184 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-220ENST00000491319 ZNF253O75346 499 aa10.92□□□□□ -0.66
SMPD4-220ENST00000491319 H2AFB2P0C5Z0 115 aa10.92□□□□□ -0.66
SMPD4-220ENST00000491319 M6PRP20645 277 aa10.92□□□□□ -0.66
SMPD4-220ENST00000491319 FGF7P21781 194 aa10.92□□□□□ -0.66
SMPD4-220ENST00000491319 S100A11P31949 105 aa10.92□□□□□ -0.66
SMPD4-220ENST00000491319 IL15RAQ13261 267 aa10.92□□□□□ -0.66
SMPD4-220ENST00000491319 STX12Q86Y82 276 aa10.92□□□□□ -0.66
SMPD4-220ENST00000491319 TRBV19A0A075B6N1 114 aa10.91□□□□□ -0.66
SMPD4-220ENST00000491319 PYYP10082 97 aa10.91□□□□□ -0.66
SMPD4-220ENST00000491319 HBG1P69891 147 aa10.91□□□□□ -0.66
SMPD4-220ENST00000491319 HBG2P69892 147 aa10.91□□□□□ -0.66
SMPD4-220ENST00000491319 ERCC8Q13216 396 aa10.91□□□□□ -0.66
SMPD4-220ENST00000491319 Q6ZTI0 123 aa10.91□□□□□ -0.66
SMPD4-220ENST00000491319 RXFP4Q8TDU9 374 aa10.91□□□□□ -0.66
SMPD4-220ENST00000491319 MRPL53Q96EL3 112 aaKnown RBP10.91□□□□□ -0.66
SMPD4-220ENST00000491319 PYGO2Q9BRQ0 406 aa10.91□□□□□ -0.66
SMPD4-220ENST00000491319 KRTAP1-5Q9BYS1 174 aa10.91□□□□□ -0.66
SMPD4-220ENST00000491319 TMPRSS5Q9H3S3 457 aa10.91□□□□□ -0.66
SMPD4-220ENST00000491319 RYR1P21817 5038 aa10.9□□□□□ -0.66
SMPD4-220ENST00000491319 C16orf90A8MZG2 172 aa10.9□□□□□ -0.66
SMPD4-220ENST00000491319 NDUFB4O95168 129 aa10.9□□□□□ -0.66
SMPD4-220ENST00000491319 GCSAMLQ5JQS6 135 aa10.9□□□□□ -0.66
SMPD4-220ENST00000491319 CCDC32Q9BV29 185 aa10.9□□□□□ -0.66
SMPD4-220ENST00000491319 KRTAP4-5Q9BYR2 181 aa10.9□□□□□ -0.66
SMPD4-220ENST00000491319 Q9H8V8 135 aa10.9□□□□□ -0.66
SMPD4-220ENST00000491319 GPN1Q9HCN4 374 aaPredicted RBP10.9□□□□□ -0.66
SMPD4-220ENST00000491319 TMEM14CQ9P0S9 112 aa10.9□□□□□ -0.66
SMPD4-220ENST00000491319 HSPG2P98160 4391 aa10.9□□□□□ -0.66
SMPD4-220ENST00000491319 FAM240BA0A1B0GVZ2 78 aa10.89□□□□□ -0.67
SMPD4-220ENST00000491319 C7orf71A4D174 169 aa10.89□□□□□ -0.67
SMPD4-220ENST00000491319 SLC25A5P05141 298 aaKnown RBP10.89□□□□□ -0.67
SMPD4-220ENST00000491319 HIST1H1EP10412 219 aaKnown RBP10.89□□□□□ -0.67
SMPD4-220ENST00000491319 BTN1A1Q13410 526 aa10.89□□□□□ -0.67
SMPD4-220ENST00000491319 EXOC3-AS1Q8N2X6 119 aa10.89□□□□□ -0.67
SMPD4-220ENST00000491319 CHAC2Q8WUX2 184 aa10.89□□□□□ -0.67
SMPD4-220ENST00000491319 BLNKQ8WV28 456 aa10.89□□□□□ -0.67
SMPD4-220ENST00000491319 ZNF503Q96F45 646 aa10.89□□□□□ -0.67
SMPD4-220ENST00000491319 NPCDR1Q9BY65 106 aa10.89□□□□□ -0.67
SMPD4-220ENST00000491319 KLLNB2CW77 178 aa10.88□□□□□ -0.67
SMPD4-220ENST00000491319 CD300CQ08708 224 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms