RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 DNAH10Q8IVF4 4471 aa9.68□□□□□ -0.86
TRAIP-211ENST00000491060 A8MTW9 85 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 E5RGE8 158 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 M0R3E3 92 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 AMBPP02760 352 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 IGLC2P0DOY2 106 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 RPL29P47914 159 aaKnown RBP9.67□□□□□ -0.86
TRAIP-211ENST00000491060 H2BFSP57053 126 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 DEFA1P59665 94 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 DEFA3P59666 94 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 ATP6V1FQ16864 119 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 VWC2Q2TAL6 325 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 TMEM88Q6PEY1 159 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 LINC00299Q6ZSB3 139 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 EXOC3-AS1Q8N2X6 119 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 PFDN5Q99471 154 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 TIMM9Q9Y5J7 89 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 DNAH6Q9C0G6 4158 aa9.67□□□□□ -0.86
TRAIP-211ENST00000491060 TRAV12-3A0A0B4J271 114 aa9.66□□□□□ -0.86
TRAIP-211ENST00000491060 F5H768 121 aa9.66□□□□□ -0.86
TRAIP-211ENST00000491060 PRAF2O60831 178 aa9.66□□□□□ -0.86
TRAIP-211ENST00000491060 TCTAP57738 103 aa9.66□□□□□ -0.86
TRAIP-211ENST00000491060 FAM122CQ6P4D5 195 aa9.66□□□□□ -0.86
TRAIP-211ENST00000491060 PPP1R1CQ8WVI7 109 aa9.66□□□□□ -0.86
TRAIP-211ENST00000491060 NMES1Q9C002 83 aa9.66□□□□□ -0.86
TRAIP-211ENST00000491060 SLC25A31Q9H0C2 315 aa9.66□□□□□ -0.86
TRAIP-211ENST00000491060 OR10J4P0C629 311 aa9.65□□□□□ -0.86
TRAIP-211ENST00000491060 CT45A10P0DMU9 189 aa9.65□□□□□ -0.86
TRAIP-211ENST00000491060 CXCL2P19875 107 aa9.65□□□□□ -0.86
TRAIP-211ENST00000491060 CDKN1BP46527 198 aa9.65□□□□□ -0.86
TRAIP-211ENST00000491060 GFI1BQ5VTD9 330 aa9.65□□□□□ -0.86
TRAIP-211ENST00000491060 SAT2Q96F10 170 aaPredicted RBP9.65□□□□□ -0.86
TRAIP-211ENST00000491060 SLC25A2Q9BXI2 301 aa9.65□□□□□ -0.86
TRAIP-211ENST00000491060 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.86
TRAIP-211ENST00000491060 RNF24Q9Y225 148 aa9.65□□□□□ -0.86
TRAIP-211ENST00000491060 IGKV2-40A0A087WW87 121 aaPredicted RBP9.64□□□□□ -0.87
TRAIP-211ENST00000491060 NUDT3O95989 172 aa9.64□□□□□ -0.87
TRAIP-211ENST00000491060 IGKV2D-40P01614 121 aaPredicted RBP9.64□□□□□ -0.87
TRAIP-211ENST00000491060 MBD2Q9UBB5 411 aa9.64□□□□□ -0.87
TRAIP-211ENST00000491060 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
TRAIP-211ENST00000491060 TRBV19A0A075B6N1 114 aa9.63□□□□□ -0.87
TRAIP-211ENST00000491060 NDUFB4O95168 129 aa9.63□□□□□ -0.87
TRAIP-211ENST00000491060 MPC2O95563 127 aa9.63□□□□□ -0.87
TRAIP-211ENST00000491060 ICAM4Q14773 271 aa9.63□□□□□ -0.87
TRAIP-211ENST00000491060 MARVELD1Q9BSK0 173 aa9.63□□□□□ -0.87
TRAIP-211ENST00000491060 WDR61Q9GZS3 305 aaKnown RBP9.63□□□□□ -0.87
TRAIP-211ENST00000491060 RPH3ALQ9UNE2 315 aa9.63□□□□□ -0.87
TRAIP-211ENST00000491060 ALG5Q9Y673 324 aa9.63□□□□□ -0.87
TRAIP-211ENST00000491060 NACAE9PAV3 2078 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 TEX48A0A1B0GUV7 120 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 PLAC8L1A1L4L8 177 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 OR7C2O60412 319 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 P0DMU3 169 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 FAM231AP0DMU4 169 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 FAM231CP0DMU5 169 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 TSPOP30536 169 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 RNASE4P34096 147 aaKnown RBP9.62□□□□□ -0.87
TRAIP-211ENST00000491060 LEPP41159 167 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 TAS2R60P59551 318 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 CYCSP99999 105 aaKnown RBP9.62□□□□□ -0.87
TRAIP-211ENST00000491060 BTN1A1Q13410 526 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 FFAR4Q5NUL3 377 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 POM121L12Q8N7R1 296 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 ATP5SQ99766 215 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 HSPB11Q9Y547 144 aa9.62□□□□□ -0.87
TRAIP-211ENST00000491060 GAGE12BA1L429 117 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 MPDU1O75352 247 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 GAGE7O76087 117 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 GAGE12FP0CL80 117 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 GAGE12GP0CL81 117 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 GAGE12IP0CL82 117 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 HIST1H1EP10412 219 aaKnown RBP9.61□□□□□ -0.87
TRAIP-211ENST00000491060 RPL12P30050 165 aaKnown RBP9.61□□□□□ -0.87
TRAIP-211ENST00000491060 OR5I1Q13606 314 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 GUK1Q16774 197 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 Q6ZQT7 251 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 SCGB1C1Q8TD33 95 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 PHYHIPLQ96FC7 376 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 C16orf74Q96GX8 76 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 PAXXQ9BUH6 204 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 OR51M1Q9H341 326 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 AAMDCQ9H7C9 122 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 WFDC1Q9HC57 220 aa9.61□□□□□ -0.87
TRAIP-211ENST00000491060 A0A0J9YY99 117 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 LYRM9A8MSI8 78 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 NPIPB6E9PJ23 425 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 C17orf112F2Z3M2 114 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 H7BYZ3 331 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 HMGB3O15347 200 aaKnown RBP9.6□□□□□ -0.87
TRAIP-211ENST00000491060 IFNA5P01569 189 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 CD300CQ08708 224 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 CCDC28AQ8IWP9 274 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 TMEM256Q8N2U0 113 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 Q8TAT8 98 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 FAM167A-AS1Q96KT0 104 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 VGLL1Q99990 258 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 AGPAT4-IT1Q9H0P7 198 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 TMEM14CQ9P0S9 112 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 FUT9Q9Y231 359 aa9.6□□□□□ -0.87
TRAIP-211ENST00000491060 SNURFLB1AK76 121 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms