RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 GAGE12BA1L429 117 aa11.51□□□□□ -0.57
SRGAP3-209ENST00000490889 COX7A2P2O60397 106 aa11.51□□□□□ -0.57
SRGAP3-209ENST00000490889 GAGE7O76087 117 aa11.51□□□□□ -0.57
SRGAP3-209ENST00000490889 GAGE12FP0CL80 117 aa11.51□□□□□ -0.57
SRGAP3-209ENST00000490889 GAGE12GP0CL81 117 aa11.51□□□□□ -0.57
SRGAP3-209ENST00000490889 GAGE12IP0CL82 117 aa11.51□□□□□ -0.57
SRGAP3-209ENST00000490889 INPP1P49441 399 aa11.51□□□□□ -0.57
SRGAP3-209ENST00000490889 OR10J6PQ8NGY7 276 aa11.51□□□□□ -0.57
SRGAP3-209ENST00000490889 RXFP4Q8TDU9 374 aa11.51□□□□□ -0.57
SRGAP3-209ENST00000490889 MITD1Q8WV92 249 aa11.51□□□□□ -0.57
SRGAP3-209ENST00000490889 RNF24Q9Y225 148 aa11.51□□□□□ -0.57
SRGAP3-209ENST00000490889 TRAV5A0A0B4J249 113 aa11.5□□□□□ -0.57
SRGAP3-209ENST00000490889 CCSO14618 274 aa11.5□□□□□ -0.57
SRGAP3-209ENST00000490889 CT45A10P0DMU9 189 aa11.5□□□□□ -0.57
SRGAP3-209ENST00000490889 M6PRP20645 277 aa11.5□□□□□ -0.57
SRGAP3-209ENST00000490889 ESRGQ1W209 222 aa11.5□□□□□ -0.57
SRGAP3-209ENST00000490889 SPATA12Q7Z6I5 190 aa11.5□□□□□ -0.57
SRGAP3-209ENST00000490889 GGACTQ9BVM4 153 aa11.5□□□□□ -0.57
SRGAP3-209ENST00000490889 C10orf113Q5VZT2 155 aa11.49□□□□□ -0.57
SRGAP3-209ENST00000490889 ZNF503Q96F45 646 aa11.49□□□□□ -0.57
SRGAP3-209ENST00000490889 TRAV12-3A0A0B4J271 114 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 NPIPB6E9PJ23 425 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 RLN2P04090 185 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 KRTAP10-2P60368 255 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 MIC13Q5XKP0 118 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 Q6ZTI0 123 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 NRARPQ7Z6K4 114 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 CCDC28AQ8IWP9 274 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 ZNF431Q8TF32 576 aaPredicted RBP11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 UPK3BQ9BT76 320 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 Q9H3A6 140 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 TMPRSS5Q9H3S3 457 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 C11orf1Q9H5F2 150 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 ZNF586Q9NXT0 402 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 PXMP4Q9Y6I8 212 aa11.48□□□□□ -0.57
SRGAP3-209ENST00000490889 SNURFLB1AK76 121 aa11.47□□□□□ -0.57
SRGAP3-209ENST00000490889 CAMLGP49069 296 aa11.47□□□□□ -0.57
SRGAP3-209ENST00000490889 DNAJC4Q9NNZ3 241 aa11.47□□□□□ -0.57
SRGAP3-209ENST00000490889 M0R3E3 92 aa11.46□□□□□ -0.57
SRGAP3-209ENST00000490889 CST7O76096 145 aa11.46□□□□□ -0.57
SRGAP3-209ENST00000490889 IL7P13232 177 aa11.46□□□□□ -0.57
SRGAP3-209ENST00000490889 ODF3Q96PU9 254 aa11.46□□□□□ -0.57
SRGAP3-209ENST00000490889 MRPS16Q9Y3D3 137 aaKnown RBP11.46□□□□□ -0.57
SRGAP3-209ENST00000490889 LSM5Q9Y4Y9 91 aaKnown RBP11.46□□□□□ -0.57
SRGAP3-209ENST00000490889 FAT1Q14517 4588 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 FAM24AA6NFZ4 105 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 CENPXA8MT69 81 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 H3BNG1 76 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 L7N2F9 121 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 LEPP41159 167 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 VAMP2P63027 116 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 DAZ2Q13117 558 aaKnown RBP11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 TTC32Q5I0X7 151 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 Q8N1X5 172 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 VSIG2Q96IQ7 327 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 PYGO2Q9BRQ0 406 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 C20orf85Q9H1P6 137 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 WDR83OSQ9Y284 106 aa11.45□□□□□ -0.58
SRGAP3-209ENST00000490889 A0A096LPF7 62 aa11.44□□□□□ -0.58
SRGAP3-209ENST00000490889 PLA2G10O15496 165 aa11.44□□□□□ -0.58
SRGAP3-209ENST00000490889 BCAP31P51572 246 aa11.44□□□□□ -0.58
SRGAP3-209ENST00000490889 CAV2P51636 162 aa11.44□□□□□ -0.58
SRGAP3-209ENST00000490889 ERCC8Q13216 396 aa11.44□□□□□ -0.58
SRGAP3-209ENST00000490889 GUK1Q16774 197 aa11.44□□□□□ -0.58
SRGAP3-209ENST00000490889 Q6ZRG5 221 aa11.44□□□□□ -0.58
SRGAP3-209ENST00000490889 C11orf72Q8NBR9 251 aa11.44□□□□□ -0.58
SRGAP3-209ENST00000490889 GSN-AS1Q9NRJ2 163 aa11.44□□□□□ -0.58
SRGAP3-209ENST00000490889 UQCC1Q9NVA1 299 aa11.44□□□□□ -0.58
SRGAP3-209ENST00000490889 TRBV19A0A075B6N1 114 aa11.43□□□□□ -0.58
SRGAP3-209ENST00000490889 A0A1W2PPQ1 181 aa11.43□□□□□ -0.58
SRGAP3-209ENST00000490889 FAM25EA8MYX2 175 aa11.43□□□□□ -0.58
SRGAP3-209ENST00000490889 ZNF253O75346 499 aa11.43□□□□□ -0.58
SRGAP3-209ENST00000490889 NDUFB4O95168 129 aa11.43□□□□□ -0.58
SRGAP3-209ENST00000490889 BTN1A1Q13410 526 aa11.43□□□□□ -0.58
SRGAP3-209ENST00000490889 VWC2Q2TAL6 325 aa11.43□□□□□ -0.58
SRGAP3-209ENST00000490889 OR1L4Q8NGR5 311 aa11.43□□□□□ -0.58
SRGAP3-209ENST00000490889 SEC22CQ9BRL7 303 aa11.43□□□□□ -0.58
SRGAP3-209ENST00000490889 SLC39A9Q9NUM3 307 aa11.43□□□□□ -0.58
SRGAP3-209ENST00000490889 UBE2L5PA0A1B0GUS4 154 aa11.42□□□□□ -0.58
SRGAP3-209ENST00000490889 C7orf71A4D174 169 aa11.42□□□□□ -0.58
SRGAP3-209ENST00000490889 ZNF324O75467 553 aaPredicted RBP11.42□□□□□ -0.58
SRGAP3-209ENST00000490889 BTF3P20290 206 aaKnown RBP11.42□□□□□ -0.58
SRGAP3-209ENST00000490889 CD300CQ08708 224 aa11.42□□□□□ -0.58
SRGAP3-209ENST00000490889 RAB31Q13636 194 aa11.42□□□□□ -0.58
SRGAP3-209ENST00000490889 ZNF846Q147U1 533 aa11.42□□□□□ -0.58
SRGAP3-209ENST00000490889 FAM19A4Q96LR4 140 aa11.42□□□□□ -0.58
SRGAP3-209ENST00000490889 PFDN5Q99471 154 aa11.42□□□□□ -0.58
SRGAP3-209ENST00000490889 SCRT2Q9NQ03 307 aa11.42□□□□□ -0.58
SRGAP3-209ENST00000490889 TRAV6A0A075B6T7 132 aa11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 IGSF23A1L1A6 192 aa11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 KLLNB2CW77 178 aa11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 SLC25A5P05141 298 aaKnown RBP11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 PYYP10082 97 aa11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 RPL29P47914 159 aaKnown RBP11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 LINC00315P59091 139 aa11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 CNPY1Q3B7I2 92 aa11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 Q6ZRN7 208 aaPredicted RBP11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 MRPL53Q96EL3 112 aaKnown RBP11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 C18orf15Q96N68 181 aa11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 AGPAT4-IT1Q9H0P7 198 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms