RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 CLLU1Q5K131 121 aa8.2□□□□□ -1.1
VARS2-210ENST00000490699 EXOC3-AS1Q8N2X6 119 aa8.2□□□□□ -1.1
VARS2-210ENST00000490699 ARL6IP6Q8N6S5 226 aa8.2□□□□□ -1.1
VARS2-210ENST00000490699 C17orf77Q96MU5 243 aa8.2□□□□□ -1.1
VARS2-210ENST00000490699 EIF5A2Q9GZV4 153 aaKnown RBP8.2□□□□□ -1.1
VARS2-210ENST00000490699 VAX2Q9UIW0 290 aa8.2□□□□□ -1.1
VARS2-210ENST00000490699 RPH3ALQ9UNE2 315 aa8.2□□□□□ -1.1
VARS2-210ENST00000490699 DNHD1Q96M86 4753 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 FAM74A7A6NL05 159 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 C11orf94C9JXX5 98 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 SOCS3O14543 225 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 RGS13O14921 159 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 PDE6DO43924 150 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 DUSP14O95147 198 aaKnown RBP8.19□□□□□ -1.1
VARS2-210ENST00000490699 NDUFB4O95168 129 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 NMBP08949 121 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 BCL2P10415 239 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 SUMO1P63165 101 aaKnown RBP8.19□□□□□ -1.1
VARS2-210ENST00000490699 PMS2P11Q13670 270 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 HAGHQ16775 308 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 FOXI2Q6ZQN5 318 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 STHQ8IWL8 128 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 RNF182Q8N6D2 247 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 RPUSD4Q96CM3 377 aaKnown RBP8.19□□□□□ -1.1
VARS2-210ENST00000490699 TUBA4BQ9H853 241 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 MAP6D1Q9H9H5 199 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 ANK2Q01484 3957 aa8.19□□□□□ -1.1
VARS2-210ENST00000490699 FBLL1A6NHQ2 334 aaKnown RBP8.18□□□□□ -1.1
VARS2-210ENST00000490699 NUTF2P61970 127 aaKnown RBP8.18□□□□□ -1.1
VARS2-210ENST00000490699 IFITM2Q01629 132 aa8.18□□□□□ -1.1
VARS2-210ENST00000490699 MEF2BQ02080 365 aaPredicted RBP8.18□□□□□ -1.1
VARS2-210ENST00000490699 TMEM78Q5T7P6 136 aa8.18□□□□□ -1.1
VARS2-210ENST00000490699 IGFL4Q6B9Z1 124 aa8.18□□□□□ -1.1
VARS2-210ENST00000490699 LYPD6BQ8NI32 183 aa8.18□□□□□ -1.1
VARS2-210ENST00000490699 PCNPQ8WW12 178 aaKnown RBP8.18□□□□□ -1.1
VARS2-210ENST00000490699 HIST1H2BAQ96A08 127 aa8.18□□□□□ -1.1
VARS2-210ENST00000490699 TRAV8-2A0A0B4J237 113 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 RBFOX3A6NFN3 312 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 CD7P09564 240 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 AKR1C3P42330 323 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 CNN1P51911 297 aaKnown RBP8.17□□□□□ -1.1
VARS2-210ENST00000490699 UBE2G1P62253 170 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 HIST1H1AQ02539 215 aaPredicted RBP8.17□□□□□ -1.1
VARS2-210ENST00000490699 PEA15Q15121 130 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 TOR2AQ5JU69 321 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 ACTL10Q5JWF8 245 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 FAM24BQ8N5W8 94 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 CYB561D1Q8N8Q1 229 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 PRR25Q96S07 402 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 ATG101Q9BSB4 218 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 NDFIP1Q9BT67 221 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 EPDR1Q9UM22 224 aa8.17□□□□□ -1.1
VARS2-210ENST00000490699 YTHDF2Q9Y5A9 579 aaKnown RBP8.17□□□□□ -1.1
VARS2-210ENST00000490699 LOC102723971A0A1B0GUV8 181 aa8.16□□□□□ -1.1
VARS2-210ENST00000490699 RBAKDNA6NC62 111 aa8.16□□□□□ -1.1
VARS2-210ENST00000490699 GGTLC3B5MD39 225 aa8.16□□□□□ -1.1
VARS2-210ENST00000490699 M0R3E3 92 aa8.16□□□□□ -1.1
VARS2-210ENST00000490699 PEX7O00628 323 aa8.16□□□□□ -1.1
VARS2-210ENST00000490699 S100A9P06702 114 aaKnown RBP8.16□□□□□ -1.1
VARS2-210ENST00000490699 CCL20P78556 96 aa8.16□□□□□ -1.1
VARS2-210ENST00000490699 ODF3L2Q3SX64 289 aa8.16□□□□□ -1.1
VARS2-210ENST00000490699 GOLT1AQ6ZVE7 132 aa8.16□□□□□ -1.1
VARS2-210ENST00000490699 OR8A1Q8NGG7 326 aa8.16□□□□□ -1.1
VARS2-210ENST00000490699 FAM210AQ96ND0 272 aa8.16□□□□□ -1.1
VARS2-210ENST00000490699 SAV1Q9H4B6 383 aaPredicted RBP8.16□□□□□ -1.1
VARS2-210ENST00000490699 SMDT1Q9H4I9 107 aa8.16□□□□□ -1.1
VARS2-210ENST00000490699 DIRC3C9JPN6 131 aa8.15□□□□□ -1.1
VARS2-210ENST00000490699 TCRAP04437 139 aa8.15□□□□□ -1.1
VARS2-210ENST00000490699 HLA-DMBP28068 263 aa8.15□□□□□ -1.1
VARS2-210ENST00000490699 TSPOP30536 169 aa8.15□□□□□ -1.1
VARS2-210ENST00000490699 ATP5G3P48201 142 aa8.15□□□□□ -1.1
VARS2-210ENST00000490699 ZNF506Q5JVG8 444 aa8.15□□□□□ -1.1
VARS2-210ENST00000490699 APRG1Q8IVJ8 170 aa8.15□□□□□ -1.1
VARS2-210ENST00000490699 OR4B1Q8NGF8 309 aa8.15□□□□□ -1.1
VARS2-210ENST00000490699 C20orf173Q96LM9 149 aa8.15□□□□□ -1.1
VARS2-210ENST00000490699 LINC00477Q96M19 166 aa8.15□□□□□ -1.1
VARS2-210ENST00000490699 SRD5A3Q9H8P0 318 aa8.15□□□□□ -1.1
VARS2-210ENST00000490699 VWFP04275 2813 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 A0A0J9YX75 114 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 RAB19A4D1S5 217 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 KNCNA6PVL3 124 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 ZNF705FA8MVS1 300 aaPredicted RBP8.14□□□□□ -1.11
VARS2-210ENST00000490699 HLA-DRB4P13762 266 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 CEBPGP53567 150 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 APOC4P55056 127 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 KRTAP10-11P60412 298 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 KPRPQ5T749 579 aaPredicted RBP8.14□□□□□ -1.11
VARS2-210ENST00000490699 Q8N3U1 123 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 TMEM75Q8N9X5 138 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 FMC1Q96HJ9 113 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 TREM1Q9NP99 234 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 MED9Q9NWA0 146 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 HLA-DRB4X5D2U9 266 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 SORL1Q92673 2214 aa8.14□□□□□ -1.11
VARS2-210ENST00000490699 FBN3Q75N90 2809 aa8.13□□□□□ -1.11
VARS2-210ENST00000490699 IGKV2-40A0A087WW87 121 aaPredicted RBP8.13□□□□□ -1.11
VARS2-210ENST00000490699 LOC102724200A0A096LPH7 203 aaPredicted RBP8.13□□□□□ -1.11
VARS2-210ENST00000490699 TMEM250H0YL14 139 aa8.13□□□□□ -1.11
VARS2-210ENST00000490699 NDUFS6O75380 124 aaKnown RBP8.13□□□□□ -1.11
VARS2-210ENST00000490699 IGKV2D-40P01614 121 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms