RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 S100A11P31949 105 aa19.55■□□□□ 0.72
HOXB3-211ENST00000490677 Q6ZRG5 221 aa19.55■□□□□ 0.72
HOXB3-211ENST00000490677 SLC39A9Q9NUM3 307 aa19.55■□□□□ 0.72
HOXB3-211ENST00000490677 ZNF586Q9NXT0 402 aa19.55■□□□□ 0.72
HOXB3-211ENST00000490677 PXMP4Q9Y6I8 212 aa19.55■□□□□ 0.72
HOXB3-211ENST00000490677 UBE2DNLQ8IWF7 75 aa19.54■□□□□ 0.72
HOXB3-211ENST00000490677 C16orf74Q96GX8 76 aa19.54■□□□□ 0.72
HOXB3-211ENST00000490677 PPP1R14DQ9NXH3 145 aa19.54■□□□□ 0.72
HOXB3-211ENST00000490677 IGLV2-18A0A075B6J9 118 aa19.53■□□□□ 0.72
HOXB3-211ENST00000490677 GFI1BQ5VTD9 330 aa19.53■□□□□ 0.72
HOXB3-211ENST00000490677 OR1L4Q8NGR5 311 aa19.53■□□□□ 0.72
HOXB3-211ENST00000490677 C20orf144Q9BQM9 153 aa19.53■□□□□ 0.72
HOXB3-211ENST00000490677 IFITM3Q01628 133 aa19.52■□□□□ 0.72
HOXB3-211ENST00000490677 BAXQ07812 192 aa19.52■□□□□ 0.72
HOXB3-211ENST00000490677 GUK1Q16774 197 aa19.52■□□□□ 0.72
HOXB3-211ENST00000490677 MZT2BQ6NZ67 158 aa19.52■□□□□ 0.72
HOXB3-211ENST00000490677 C15orf53Q8NAA6 179 aa19.52■□□□□ 0.72
HOXB3-211ENST00000490677 S100ZQ8WXG8 99 aa19.52■□□□□ 0.72
HOXB3-211ENST00000490677 PFDN5Q99471 154 aa19.52■□□□□ 0.72
HOXB3-211ENST00000490677 KRTAP17-1Q9BYP8 105 aa19.52■□□□□ 0.72
HOXB3-211ENST00000490677 STX12Q86Y82 276 aa19.51■□□□□ 0.71
HOXB3-211ENST00000490677 TMEM263Q8WUH6 116 aaKnown RBP19.51■□□□□ 0.71
HOXB3-211ENST00000490677 NPIPB6E9PJ23 425 aa19.5■□□□□ 0.71
HOXB3-211ENST00000490677 H7BYZ3 331 aa19.5■□□□□ 0.71
HOXB3-211ENST00000490677 ZNF253O75346 499 aa19.5■□□□□ 0.71
HOXB3-211ENST00000490677 CT45A10P0DMU9 189 aa19.5■□□□□ 0.71
HOXB3-211ENST00000490677 HTN1P15515 57 aa19.5■□□□□ 0.71
HOXB3-211ENST00000490677 ZNF493Q6ZR52 646 aa19.5■□□□□ 0.71
HOXB3-211ENST00000490677 LINC00612Q8N6U2 182 aa19.5■□□□□ 0.71
HOXB3-211ENST00000490677 OR10J6PQ8NGY7 276 aa19.5■□□□□ 0.71
HOXB3-211ENST00000490677 TIMM8BQ9Y5J9 83 aaPredicted RBP19.5■□□□□ 0.71
HOXB3-211ENST00000490677 CBY3A6NI87 242 aa19.49■□□□□ 0.71
HOXB3-211ENST00000490677 PRSS29PA6NIE9 313 aa19.49■□□□□ 0.71
HOXB3-211ENST00000490677 NDUFB4O95168 129 aa19.49■□□□□ 0.71
HOXB3-211ENST00000490677 FGF7P21781 194 aa19.49■□□□□ 0.71
HOXB3-211ENST00000490677 HBG1P69891 147 aa19.49■□□□□ 0.71
HOXB3-211ENST00000490677 HBG2P69892 147 aa19.49■□□□□ 0.71
HOXB3-211ENST00000490677 ATP6V1FQ16864 119 aa19.49■□□□□ 0.71
HOXB3-211ENST00000490677 ODF3Q96PU9 254 aa19.49■□□□□ 0.71
HOXB3-211ENST00000490677 TMEM14CQ9P0S9 112 aa19.49■□□□□ 0.71
HOXB3-211ENST00000490677 TRBV19A0A075B6N1 114 aa19.48■□□□□ 0.71
HOXB3-211ENST00000490677 UPK1BO75841 260 aa19.48■□□□□ 0.71
HOXB3-211ENST00000490677 SIX6O95475 246 aa19.48■□□□□ 0.71
HOXB3-211ENST00000490677 ATP5G1P05496 136 aa19.48■□□□□ 0.71
HOXB3-211ENST00000490677 ATP5G3P48201 142 aa19.48■□□□□ 0.71
HOXB3-211ENST00000490677 NHLH2Q02577 135 aa19.48■□□□□ 0.71
HOXB3-211ENST00000490677 GCSAMLQ5JQS6 135 aa19.48■□□□□ 0.71
HOXB3-211ENST00000490677 GPN1Q9HCN4 374 aaPredicted RBP19.48■□□□□ 0.71
HOXB3-211ENST00000490677 PCLOQ9Y6V0 5065 aa19.47■□□□□ 0.71
HOXB3-211ENST00000490677 F5H768 121 aa19.47■□□□□ 0.71
HOXB3-211ENST00000490677 H0YIZ8 118 aa19.47■□□□□ 0.71
HOXB3-211ENST00000490677 M0R3E3 92 aa19.47■□□□□ 0.71
HOXB3-211ENST00000490677 NPCDR1Q9BY65 106 aa19.47■□□□□ 0.71
HOXB3-211ENST00000490677 NOP10Q9NPE3 64 aaKnown RBP19.47■□□□□ 0.71
HOXB3-211ENST00000490677 A6NHS1 94 aa19.46■□□□□ 0.71
HOXB3-211ENST00000490677 MPDU1O75352 247 aa19.46■□□□□ 0.71
HOXB3-211ENST00000490677 MRPL53Q96EL3 112 aaKnown RBP19.46■□□□□ 0.71
HOXB3-211ENST00000490677 OR5AC2Q9NZP5 309 aa19.46■□□□□ 0.71
HOXB3-211ENST00000490677 PYYP10082 97 aa19.45■□□□□ 0.7
HOXB3-211ENST00000490677 HIST1H1EP10412 219 aaKnown RBP19.44■□□□□ 0.7
HOXB3-211ENST00000490677 FAM3BP58499 235 aaPredicted RBP19.44■□□□□ 0.7
HOXB3-211ENST00000490677 ENKURQ8TC29 256 aa19.44■□□□□ 0.7
HOXB3-211ENST00000490677 FAM167A-AS1Q96KT0 104 aa19.44■□□□□ 0.7
HOXB3-211ENST00000490677 FAM19A4Q96LR4 140 aa19.44■□□□□ 0.7
HOXB3-211ENST00000490677 NMES1Q9C002 83 aa19.44■□□□□ 0.7
HOXB3-211ENST00000490677 OR5C1Q8NGR4 320 aa19.43■□□□□ 0.7
HOXB3-211ENST00000490677 THAP6Q8TBB0 222 aa19.43■□□□□ 0.7
HOXB3-211ENST00000490677 RNF141Q8WVD5 230 aa19.43■□□□□ 0.7
HOXB3-211ENST00000490677 SLC25A2Q9BXI2 301 aa19.43■□□□□ 0.7
HOXB3-211ENST00000490677 TRAV12-3A0A0B4J271 114 aa19.42■□□□□ 0.7
HOXB3-211ENST00000490677 J3KRW8 73 aa19.42■□□□□ 0.7
HOXB3-211ENST00000490677 PDE6HQ13956 83 aa19.42■□□□□ 0.7
HOXB3-211ENST00000490677 ZNRF2Q8NHG8 242 aa19.42■□□□□ 0.7
HOXB3-211ENST00000490677 LEPP41159 167 aa19.41■□□□□ 0.7
HOXB3-211ENST00000490677 ERCC8Q13216 396 aa19.41■□□□□ 0.7
HOXB3-211ENST00000490677 KLLNB2CW77 178 aa19.4■□□□□ 0.7
HOXB3-211ENST00000490677 E5RGE8 158 aa19.4■□□□□ 0.7
HOXB3-211ENST00000490677 H2BFSP57053 126 aa19.4■□□□□ 0.7
HOXB3-211ENST00000490677 EXOC3-AS1Q8N2X6 119 aa19.4■□□□□ 0.7
HOXB3-211ENST00000490677 MUC4Q99102 2169 aa19.39■□□□□ 0.69
HOXB3-211ENST00000490677 NUDT3O95989 172 aa19.39■□□□□ 0.69
HOXB3-211ENST00000490677 LRRC37A5PQ49AS3 106 aa19.39■□□□□ 0.69
HOXB3-211ENST00000490677 MIR17HGQ75NE6 70 aa19.39■□□□□ 0.69
HOXB3-211ENST00000490677 AGPAT4-IT1Q9H0P7 198 aa19.39■□□□□ 0.69
HOXB3-211ENST00000490677 PRELID1Q9Y255 219 aa19.39■□□□□ 0.69
HOXB3-211ENST00000490677 PRAF2O60831 178 aa19.38■□□□□ 0.69
HOXB3-211ENST00000490677 HOXA5P20719 270 aa19.38■□□□□ 0.69
HOXB3-211ENST00000490677 PYGO2Q9BRQ0 406 aa19.38■□□□□ 0.69
HOXB3-211ENST00000490677 MARVELD1Q9BSK0 173 aa19.38■□□□□ 0.69
HOXB3-211ENST00000490677 WDR61Q9GZS3 305 aaKnown RBP19.38■□□□□ 0.69
HOXB3-211ENST00000490677 SLC25A31Q9H0C2 315 aa19.38■□□□□ 0.69
HOXB3-211ENST00000490677 LINC00588Q9Y4M8 146 aa19.38■□□□□ 0.69
HOXB3-211ENST00000490677 RYR1P21817 5038 aa19.38■□□□□ 0.69
HOXB3-211ENST00000490677 INMT-MINDY4F8WBC2 141 aa19.37■□□□□ 0.69
HOXB3-211ENST00000490677 ZNF324O75467 553 aaPredicted RBP19.37■□□□□ 0.69
HOXB3-211ENST00000490677 SLC25A5P05141 298 aaKnown RBP19.37■□□□□ 0.69
HOXB3-211ENST00000490677 CCDC28AQ8IWP9 274 aa19.37■□□□□ 0.69
HOXB3-211ENST00000490677 C11orf72Q8NBR9 251 aa19.37■□□□□ 0.69
HOXB3-211ENST00000490677 BLNKQ8WV28 456 aa19.37■□□□□ 0.69
HOXB3-211ENST00000490677 ATG101Q9BSB4 218 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms