RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 OR10J4P0C629 311 aa12.78□□□□□ -0.36
ERCC3-207ENST00000490062 NUTF2P61970 127 aaKnown RBP12.78□□□□□ -0.36
ERCC3-207ENST00000490062 DPPA3Q6W0C5 159 aa12.78□□□□□ -0.36
ERCC3-207ENST00000490062 OR8A1Q8NGG7 326 aa12.78□□□□□ -0.36
ERCC3-207ENST00000490062 RPUSD4Q96CM3 377 aaKnown RBP12.78□□□□□ -0.36
ERCC3-207ENST00000490062 PLA2G2EQ9NZK7 142 aa12.78□□□□□ -0.36
ERCC3-207ENST00000490062 F6UB75 175 aa12.77□□□□□ -0.37
ERCC3-207ENST00000490062 CXorf1O96002 111 aa12.77□□□□□ -0.37
ERCC3-207ENST00000490062 ARL14EPLP0DKL9 152 aa12.77□□□□□ -0.37
ERCC3-207ENST00000490062 DEFB1P60022 68 aa12.77□□□□□ -0.37
ERCC3-207ENST00000490062 EIF5AL1Q6IS14 154 aaKnown RBP12.77□□□□□ -0.37
ERCC3-207ENST00000490062 AMTNQ6UX39 209 aa12.77□□□□□ -0.37
ERCC3-207ENST00000490062 PHYHIPLQ96FC7 376 aa12.77□□□□□ -0.37
ERCC3-207ENST00000490062 AAMDCQ9H7C9 122 aa12.77□□□□□ -0.37
ERCC3-207ENST00000490062 TGP01266 2768 aa12.77□□□□□ -0.37
ERCC3-207ENST00000490062 SSX7Q7RTT5 188 aa12.76□□□□□ -0.37
ERCC3-207ENST00000490062 BLNKQ8WV28 456 aa12.76□□□□□ -0.37
ERCC3-207ENST00000490062 RNF183Q96D59 192 aa12.76□□□□□ -0.37
ERCC3-207ENST00000490062 C1QTNF4Q9BXJ3 329 aa12.76□□□□□ -0.37
ERCC3-207ENST00000490062 TMEM167BQ9NRX6 74 aa12.76□□□□□ -0.37
ERCC3-207ENST00000490062 GCHFRP30047 84 aa12.75□□□□□ -0.37
ERCC3-207ENST00000490062 RAB5CP51148 216 aa12.75□□□□□ -0.37
ERCC3-207ENST00000490062 CNN1P51911 297 aaKnown RBP12.75□□□□□ -0.37
ERCC3-207ENST00000490062 CSNK1G2-AS1Q8NCQ2 148 aa12.75□□□□□ -0.37
ERCC3-207ENST00000490062 MBD3L1Q8WWY6 194 aa12.75□□□□□ -0.37
ERCC3-207ENST00000490062 OVOL2Q9BRP0 275 aa12.75□□□□□ -0.37
ERCC3-207ENST00000490062 U3KQK5 164 aa12.75□□□□□ -0.37
ERCC3-207ENST00000490062 M0R3E3 92 aa12.74□□□□□ -0.37
ERCC3-207ENST00000490062 EIF3GO75821 320 aaKnown RBP eCLIP12.74□□□□□ -0.37
ERCC3-207ENST00000490062 CA1P00915 261 aaPredicted RBP12.74□□□□□ -0.37
ERCC3-207ENST00000490062 EXOC3-AS1Q8N2X6 119 aa12.74□□□□□ -0.37
ERCC3-207ENST00000490062 TMED6Q8WW62 240 aa12.74□□□□□ -0.37
ERCC3-207ENST00000490062 RCHY1Q96PM5 261 aa12.74□□□□□ -0.37
ERCC3-207ENST00000490062 ODF3Q96PU9 254 aa12.74□□□□□ -0.37
ERCC3-207ENST00000490062 Q9H3A6 140 aa12.74□□□□□ -0.37
ERCC3-207ENST00000490062 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
ERCC3-207ENST00000490062 TENM3Q9P273 2699 aa12.73□□□□□ -0.37
ERCC3-207ENST00000490062 ZNF705FA8MVS1 300 aaPredicted RBP12.73□□□□□ -0.37
ERCC3-207ENST00000490062 PRAC2D3DTV9 90 aa12.73□□□□□ -0.37
ERCC3-207ENST00000490062 NPIPB6E9PJ23 425 aa12.73□□□□□ -0.37
ERCC3-207ENST00000490062 HMGB3O15347 200 aaKnown RBP12.73□□□□□ -0.37
ERCC3-207ENST00000490062 AMBPP02760 352 aa12.73□□□□□ -0.37
ERCC3-207ENST00000490062 ICAM4Q14773 271 aa12.73□□□□□ -0.37
ERCC3-207ENST00000490062 OR4B1Q8NGF8 309 aa12.73□□□□□ -0.37
ERCC3-207ENST00000490062 NBEAL2Q6ZNJ1 2754 aa12.72□□□□□ -0.37
ERCC3-207ENST00000490062 RBAKDNA6NC62 111 aa12.72□□□□□ -0.37
ERCC3-207ENST00000490062 SPRY2O43597 315 aa12.72□□□□□ -0.37
ERCC3-207ENST00000490062 SLC25A5P05141 298 aaKnown RBP12.72□□□□□ -0.37
ERCC3-207ENST00000490062 SULT1A2P50226 295 aa12.72□□□□□ -0.37
ERCC3-207ENST00000490062 RANP62826 216 aaKnown RBP12.72□□□□□ -0.37
ERCC3-207ENST00000490062 DEFB135Q30KP9 77 aa12.72□□□□□ -0.37
ERCC3-207ENST00000490062 OR10J6PQ8NGY7 276 aa12.72□□□□□ -0.37
ERCC3-207ENST00000490062 RXFP4Q8TDU9 374 aa12.72□□□□□ -0.37
ERCC3-207ENST00000490062 STAB2Q8WWQ8 2551 aa12.72□□□□□ -0.37
ERCC3-207ENST00000490062 A0A1W2PRE2 83 aa12.71□□□□□ -0.37
ERCC3-207ENST00000490062 MAP1LC3B2A6NCE7 125 aa12.71□□□□□ -0.37
ERCC3-207ENST00000490062 FHITP49789 147 aa12.71□□□□□ -0.37
ERCC3-207ENST00000490062 HIST1H1AQ02539 215 aaPredicted RBP12.71□□□□□ -0.37
ERCC3-207ENST00000490062 FAM74A1Q5RGS3 127 aa12.71□□□□□ -0.37
ERCC3-207ENST00000490062 C9orf47Q6ZRZ4 202 aa12.71□□□□□ -0.37
ERCC3-207ENST00000490062 MAP1LC3BQ9GZQ8 125 aa12.71□□□□□ -0.37
ERCC3-207ENST00000490062 PPP1R14DQ9NXH3 145 aa12.71□□□□□ -0.37
ERCC3-207ENST00000490062 ARL2-SNX15V9GYD0 113 aa12.71□□□□□ -0.37
ERCC3-207ENST00000490062 TRBV7-9A0A0J9YWB2 115 aa12.7□□□□□ -0.38
ERCC3-207ENST00000490062 ZNF705EA8MWA4 302 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-207ENST00000490062 BOLA2-SMG1P6H3BVE0 249 aa12.7□□□□□ -0.38
ERCC3-207ENST00000490062 ZNF705DP0CH99 300 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-207ENST00000490062 ZNF705BP0CI00 300 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-207ENST00000490062 LINC00477Q96M19 166 aa12.7□□□□□ -0.38
ERCC3-207ENST00000490062 SLC35B3Q9H1N7 401 aa12.7□□□□□ -0.38
ERCC3-207ENST00000490062 RETNQ9HD89 108 aa12.7□□□□□ -0.38
ERCC3-207ENST00000490062 TRAV1-1A0A0B4J248 108 aa12.69□□□□□ -0.38
ERCC3-207ENST00000490062 PGPA6NDG6 321 aa12.69□□□□□ -0.38
ERCC3-207ENST00000490062 CRXO43186 299 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-207ENST00000490062 IGKV3-20P01619 116 aa12.69□□□□□ -0.38
ERCC3-207ENST00000490062 CSN1S1P47710 185 aa12.69□□□□□ -0.38
ERCC3-207ENST00000490062 NKX2-5P52952 324 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-207ENST00000490062 ZNF705AQ6ZN79 300 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-207ENST00000490062 FAM213BQ8TBF2 198 aa12.69□□□□□ -0.38
ERCC3-207ENST00000490062 FAM19A4Q96LR4 140 aa12.69□□□□□ -0.38
ERCC3-207ENST00000490062 IGF2BP2-AS1Q96M15 143 aa12.69□□□□□ -0.38
ERCC3-207ENST00000490062 NKX6-2Q9C056 277 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-207ENST00000490062 SERTM2A0A1B0GWG4 89 aa12.68□□□□□ -0.38
ERCC3-207ENST00000490062 DIRC3C9JPN6 131 aa12.68□□□□□ -0.38
ERCC3-207ENST00000490062 NMBP08949 121 aa12.68□□□□□ -0.38
ERCC3-207ENST00000490062 C5orf17Q8NAS9 161 aa12.68□□□□□ -0.38
ERCC3-207ENST00000490062 NEU1Q99519 415 aa12.68□□□□□ -0.38
ERCC3-207ENST00000490062 EDA2RQ9HAV5 297 aa12.68□□□□□ -0.38
ERCC3-207ENST00000490062 XCL2Q9UBD3 114 aa12.68□□□□□ -0.38
ERCC3-207ENST00000490062 GGTLC3B5MD39 225 aa12.67□□□□□ -0.38
ERCC3-207ENST00000490062 H2AFB1P0C5Y9 115 aa12.67□□□□□ -0.38
ERCC3-207ENST00000490062 TSPOP30536 169 aa12.67□□□□□ -0.38
ERCC3-207ENST00000490062 CDKN1BP46527 198 aa12.67□□□□□ -0.38
ERCC3-207ENST00000490062 C20orf144Q9BQM9 153 aa12.67□□□□□ -0.38
ERCC3-207ENST00000490062 AGPAT4-IT1Q9H0P7 198 aa12.67□□□□□ -0.38
ERCC3-207ENST00000490062 LENEPQ9Y5L5 61 aa12.67□□□□□ -0.38
ERCC3-207ENST00000490062 CT45A10P0DMU9 189 aa12.66□□□□□ -0.38
ERCC3-207ENST00000490062 CRISP2P16562 243 aa12.66□□□□□ -0.38
ERCC3-207ENST00000490062 FGF8P55075 233 aaPredicted RBP12.66□□□□□ -0.38
ERCC3-207ENST00000490062 CMTM2Q8TAZ6 248 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms