RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ATP5G3P48201 142 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 CAV2P51636 162 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 GFI1BQ5VTD9 330 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 ZNF493Q6ZR52 646 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 LINC00612Q8N6U2 182 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 ZNRF2Q8NHG8 242 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 TMEM263Q8WUH6 116 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 C20orf144Q9BQM9 153 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 NOP10Q9NPE3 64 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 UQCC1Q9NVA1 299 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 ZNF586Q9NXT0 402 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 PXMP4Q9Y6I8 212 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 H2AFB2P0C5Z0 115 aa13.56□□□□□ -0.24
TNFRSF1B-202ENST00000489921 MED14OSP0DP75 135 aa13.56□□□□□ -0.24
TNFRSF1B-202ENST00000489921 RPL29P47914 159 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1B-202ENST00000489921 CHAC2Q8WUX2 184 aa13.56□□□□□ -0.24
TNFRSF1B-202ENST00000489921 LYRM2Q9NU23 88 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF1B-202ENST00000489921 ABCA13Q86UQ4 5058 aa13.55□□□□□ -0.24
TNFRSF1B-202ENST00000489921 SULT1A1P50225 295 aa13.55□□□□□ -0.24
TNFRSF1B-202ENST00000489921 RAB32Q13637 225 aa13.55□□□□□ -0.24
TNFRSF1B-202ENST00000489921 C1orf134Q5TEV5 83 aa13.55□□□□□ -0.24
TNFRSF1B-202ENST00000489921 Q6ZRG5 221 aa13.55□□□□□ -0.24
TNFRSF1B-202ENST00000489921 TMEM252Q8N6L7 170 aa13.55□□□□□ -0.24
TNFRSF1B-202ENST00000489921 OR10J6PQ8NGY7 276 aa13.55□□□□□ -0.24
TNFRSF1B-202ENST00000489921 RNF141Q8WVD5 230 aa13.55□□□□□ -0.24
TNFRSF1B-202ENST00000489921 NDUFA13Q9P0J0 144 aa13.55□□□□□ -0.24
TNFRSF1B-202ENST00000489921 MUC4Q99102 2169 aa13.55□□□□□ -0.24
TNFRSF1B-202ENST00000489921 NPIPB6E9PJ23 425 aa13.54□□□□□ -0.24
TNFRSF1B-202ENST00000489921 NUDT3O95989 172 aa13.54□□□□□ -0.24
TNFRSF1B-202ENST00000489921 RAB31Q13636 194 aa13.54□□□□□ -0.24
TNFRSF1B-202ENST00000489921 OR1L4Q8NGR5 311 aa13.54□□□□□ -0.24
TNFRSF1B-202ENST00000489921 CCDC32Q9BV29 185 aa13.54□□□□□ -0.24
TNFRSF1B-202ENST00000489921 SLC39A9Q9NUM3 307 aa13.54□□□□□ -0.24
TNFRSF1B-202ENST00000489921 LINC00588Q9Y4M8 146 aa13.54□□□□□ -0.24
TNFRSF1B-202ENST00000489921 LRP1BQ9NZR2 4599 aa13.54□□□□□ -0.24
TNFRSF1B-202ENST00000489921 ZNF253O75346 499 aa13.53□□□□□ -0.24
TNFRSF1B-202ENST00000489921 NDUFB4O95168 129 aa13.53□□□□□ -0.24
TNFRSF1B-202ENST00000489921 S100A11P31949 105 aa13.53□□□□□ -0.24
TNFRSF1B-202ENST00000489921 GUK1Q16774 197 aa13.53□□□□□ -0.24
TNFRSF1B-202ENST00000489921 ODF3Q96PU9 254 aa13.53□□□□□ -0.24
TNFRSF1B-202ENST00000489921 ATG101Q9BSB4 218 aa13.53□□□□□ -0.24
TNFRSF1B-202ENST00000489921 HSPG2P98160 4391 aa13.53□□□□□ -0.24
TNFRSF1B-202ENST00000489921 TRBV19A0A075B6N1 114 aa13.52□□□□□ -0.25
TNFRSF1B-202ENST00000489921 NBDYA0A0U1RRE5 68 aa13.52□□□□□ -0.25
TNFRSF1B-202ENST00000489921 UBE2L5PA0A1B0GUS4 154 aa13.52□□□□□ -0.25
TNFRSF1B-202ENST00000489921 S100A10P60903 97 aa13.52□□□□□ -0.25
TNFRSF1B-202ENST00000489921 PFDN5Q99471 154 aa13.52□□□□□ -0.25
TNFRSF1B-202ENST00000489921 J3KRW8 73 aa13.51□□□□□ -0.25
TNFRSF1B-202ENST00000489921 M0R3E3 92 aa13.51□□□□□ -0.25
TNFRSF1B-202ENST00000489921 PVALBP20472 110 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1B-202ENST00000489921 HOXA5P20719 270 aa13.51□□□□□ -0.25
TNFRSF1B-202ENST00000489921 SOHLH1Q5JUK2 328 aa13.51□□□□□ -0.25
TNFRSF1B-202ENST00000489921 ZNF575Q86XF7 245 aa13.51□□□□□ -0.25
TNFRSF1B-202ENST00000489921 TMEM14CQ9P0S9 112 aa13.51□□□□□ -0.25
TNFRSF1B-202ENST00000489921 TRAV12-3A0A0B4J271 114 aa13.5□□□□□ -0.25
TNFRSF1B-202ENST00000489921 FAM240BA0A1B0GVZ2 78 aa13.5□□□□□ -0.25
TNFRSF1B-202ENST00000489921 TNP2Q05952 138 aa13.5□□□□□ -0.25
TNFRSF1B-202ENST00000489921 BAXQ07812 192 aa13.5□□□□□ -0.25
TNFRSF1B-202ENST00000489921 ERCC8Q13216 396 aa13.5□□□□□ -0.25
TNFRSF1B-202ENST00000489921 GCSAMLQ5JQS6 135 aa13.5□□□□□ -0.25
TNFRSF1B-202ENST00000489921 FAM19A4Q96LR4 140 aa13.5□□□□□ -0.25
TNFRSF1B-202ENST00000489921 PYYP10082 97 aa13.49□□□□□ -0.25
TNFRSF1B-202ENST00000489921 FGF7P21781 194 aa13.49□□□□□ -0.25
TNFRSF1B-202ENST00000489921 LEPP41159 167 aa13.49□□□□□ -0.25
TNFRSF1B-202ENST00000489921 ATP6V1FQ16864 119 aa13.49□□□□□ -0.25
TNFRSF1B-202ENST00000489921 MRPL53Q96EL3 112 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1B-202ENST00000489921 TRAV26-1A0A087WT03 109 aa13.48□□□□□ -0.25
TNFRSF1B-202ENST00000489921 ZNF324O75467 553 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1B-202ENST00000489921 CCL18P55774 89 aa13.48□□□□□ -0.25
TNFRSF1B-202ENST00000489921 HBG1P69891 147 aa13.48□□□□□ -0.25
TNFRSF1B-202ENST00000489921 HBG2P69892 147 aa13.48□□□□□ -0.25
TNFRSF1B-202ENST00000489921 NHLH2Q02577 135 aa13.48□□□□□ -0.25
TNFRSF1B-202ENST00000489921 ASAH1Q13510 395 aa13.48□□□□□ -0.25
TNFRSF1B-202ENST00000489921 LINC00299Q6ZSB3 139 aa13.48□□□□□ -0.25
TNFRSF1B-202ENST00000489921 STX12Q86Y82 276 aa13.48□□□□□ -0.25
TNFRSF1B-202ENST00000489921 CCDC28AQ8IWP9 274 aa13.48□□□□□ -0.25
TNFRSF1B-202ENST00000489921 NPCDR1Q9BY65 106 aa13.48□□□□□ -0.25
TNFRSF1B-202ENST00000489921 GAGE12BA1L429 117 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 GAGE7O76087 117 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 GAGE12FP0CL80 117 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 GAGE12GP0CL81 117 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 GAGE12IP0CL82 117 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 HIST1H1EP10412 219 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 DAZ2Q13117 558 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 OR5I1Q13606 314 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 SSX7Q7RTT5 188 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 C11orf72Q8NBR9 251 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 RXFP4Q8TDU9 374 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 FAM167A-AS1Q96KT0 104 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 PYGO2Q9BRQ0 406 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 SLC25A2Q9BXI2 301 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 AGPAT4-IT1Q9H0P7 198 aa13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 GPN1Q9HCN4 374 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1B-202ENST00000489921 KLLNB2CW77 178 aa13.46□□□□□ -0.25
TNFRSF1B-202ENST00000489921 SIX6O95475 246 aa13.46□□□□□ -0.25
TNFRSF1B-202ENST00000489921 M6PRP20645 277 aa13.46□□□□□ -0.25
TNFRSF1B-202ENST00000489921 CD300CQ08708 224 aa13.46□□□□□ -0.25
TNFRSF1B-202ENST00000489921 PDE6HQ13956 83 aa13.46□□□□□ -0.25
TNFRSF1B-202ENST00000489921 Q6ZTI0 123 aa13.46□□□□□ -0.25
TNFRSF1B-202ENST00000489921 EXOC3-AS1Q8N2X6 119 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms