RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 RNF141Q8WVD5 230 aa11.36□□□□□ -0.59
LMX1A-204ENST00000489443 LYSTQ99698 3801 aa11.36□□□□□ -0.59
LMX1A-204ENST00000489443 TRAV12-2A0A075B6T6 113 aa11.35□□□□□ -0.59
LMX1A-204ENST00000489443 NUPR2A6NF83 97 aa11.35□□□□□ -0.59
LMX1A-204ENST00000489443 M0R3E3 92 aa11.35□□□□□ -0.59
LMX1A-204ENST00000489443 EIF3GO75821 320 aaKnown RBP eCLIP11.35□□□□□ -0.59
LMX1A-204ENST00000489443 INSP01308 110 aa11.35□□□□□ -0.59
LMX1A-204ENST00000489443 EMP1P54849 157 aa11.35□□□□□ -0.59
LMX1A-204ENST00000489443 PDE6HQ13956 83 aa11.35□□□□□ -0.59
LMX1A-204ENST00000489443 CEMP1Q6PRD7 247 aaPredicted RBP11.35□□□□□ -0.59
LMX1A-204ENST00000489443 BAP18Q8IXM2 172 aa11.35□□□□□ -0.59
LMX1A-204ENST00000489443 EXOC3-AS1Q8N2X6 119 aa11.35□□□□□ -0.59
LMX1A-204ENST00000489443 NEU1Q99519 415 aa11.35□□□□□ -0.59
LMX1A-204ENST00000489443 AAMDCQ9H7C9 122 aa11.35□□□□□ -0.59
LMX1A-204ENST00000489443 TNFSF18Q9UNG2 199 aa11.35□□□□□ -0.59
LMX1A-204ENST00000489443 DYNC2H1Q8NCM8 4307 aaKnown RBP11.34□□□□□ -0.59
LMX1A-204ENST00000489443 A0A1W2PPV4 95 aa11.34□□□□□ -0.59
LMX1A-204ENST00000489443 RNF222A6NCQ9 220 aa11.34□□□□□ -0.59
LMX1A-204ENST00000489443 SMIM9A6NGZ8 99 aa11.34□□□□□ -0.59
LMX1A-204ENST00000489443 CRXO43186 299 aaPredicted RBP11.34□□□□□ -0.59
LMX1A-204ENST00000489443 M6PRP20645 277 aa11.34□□□□□ -0.59
LMX1A-204ENST00000489443 TAS2R45P59539 299 aa11.34□□□□□ -0.59
LMX1A-204ENST00000489443 RAB2AP61019 212 aa11.34□□□□□ -0.59
LMX1A-204ENST00000489443 ICAM4Q14773 271 aa11.34□□□□□ -0.59
LMX1A-204ENST00000489443 FXYD5Q96DB9 178 aa11.34□□□□□ -0.59
LMX1A-204ENST00000489443 PRELID1Q9Y255 219 aa11.34□□□□□ -0.59
LMX1A-204ENST00000489443 G3V3Q6 166 aa11.33□□□□□ -0.6
LMX1A-204ENST00000489443 SMLR1H3BR10 107 aa11.33□□□□□ -0.6
LMX1A-204ENST00000489443 HBE1P02100 147 aa11.33□□□□□ -0.6
LMX1A-204ENST00000489443 UBE2L3P68036 154 aaKnown RBP11.33□□□□□ -0.6
LMX1A-204ENST00000489443 KHDC3LQ587J8 217 aa11.33□□□□□ -0.6
LMX1A-204ENST00000489443 FAM122CQ6P4D5 195 aa11.33□□□□□ -0.6
LMX1A-204ENST00000489443 MRPL53Q96EL3 112 aaKnown RBP11.33□□□□□ -0.6
LMX1A-204ENST00000489443 ZNF503Q96F45 646 aa11.33□□□□□ -0.6
LMX1A-204ENST00000489443 CELA1Q9UNI1 258 aa11.33□□□□□ -0.6
LMX1A-204ENST00000489443 KLK5Q9Y337 293 aaPredicted RBP11.33□□□□□ -0.6
LMX1A-204ENST00000489443 ATP6V0CP27449 155 aa11.32□□□□□ -0.6
LMX1A-204ENST00000489443 CDKN1BP46527 198 aa11.32□□□□□ -0.6
LMX1A-204ENST00000489443 RRN3P1Q2M238 152 aa11.32□□□□□ -0.6
LMX1A-204ENST00000489443 RPL7L1Q6DKI1 246 aaKnown RBP11.32□□□□□ -0.6
LMX1A-204ENST00000489443 RPP25LQ8N5L8 163 aaKnown RBP11.32□□□□□ -0.6
LMX1A-204ENST00000489443 OR10G4Q8NGN3 311 aa11.32□□□□□ -0.6
LMX1A-204ENST00000489443 OR10G9Q8NGN4 311 aa11.32□□□□□ -0.6
LMX1A-204ENST00000489443 OR10G7Q8NGN6 311 aa11.32□□□□□ -0.6
LMX1A-204ENST00000489443 PHYHIPLQ96FC7 376 aa11.32□□□□□ -0.6
LMX1A-204ENST00000489443 BORCS7-ASMTA0A0B4J1R7 106 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 LCE6AA0A183 80 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 LOC102723971A0A1B0GUV8 181 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 TMEM189A5PLL7 270 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 ZNF705GA8MUZ8 300 aaPredicted RBP11.31□□□□□ -0.6
LMX1A-204ENST00000489443 NPIPB6E9PJ23 425 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 HMGB3O15347 200 aaKnown RBP11.31□□□□□ -0.6
LMX1A-204ENST00000489443 ARPC5O15511 151 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 PRM2P04554 102 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 CT45A10P0DMU9 189 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 TSPOP30536 169 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 RANP62826 216 aaKnown RBP11.31□□□□□ -0.6
LMX1A-204ENST00000489443 ERCC8Q13216 396 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 ZNF767PQ75MW2 155 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 LINC01587Q99440 93 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
LMX1A-204ENST00000489443 SH3BGRL3Q9H299 93 aa11.31□□□□□ -0.6
LMX1A-204ENST00000489443 J3KRW8 73 aa11.3□□□□□ -0.6
LMX1A-204ENST00000489443 JTBO76095 146 aa11.3□□□□□ -0.6
LMX1A-204ENST00000489443 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
LMX1A-204ENST00000489443 Q6ZTC4 211 aa11.3□□□□□ -0.6
LMX1A-204ENST00000489443 OR2G3Q8NGZ4 309 aa11.3□□□□□ -0.6
LMX1A-204ENST00000489443 PLECQ15149 4684 aaKnown RBP11.3□□□□□ -0.6
LMX1A-204ENST00000489443 RYR3Q15413 4870 aa11.3□□□□□ -0.6
LMX1A-204ENST00000489443 IGKV2-40A0A087WW87 121 aaPredicted RBP11.29□□□□□ -0.6
LMX1A-204ENST00000489443 IGKV2D-40P01614 121 aaPredicted RBP11.29□□□□□ -0.6
LMX1A-204ENST00000489443 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
LMX1A-204ENST00000489443 HTN1P15515 57 aa11.29□□□□□ -0.6
LMX1A-204ENST00000489443 LEPP41159 167 aa11.29□□□□□ -0.6
LMX1A-204ENST00000489443 SERF2P84101 59 aa11.29□□□□□ -0.6
LMX1A-204ENST00000489443 C12orf74Q32Q52 190 aa11.29□□□□□ -0.6
LMX1A-204ENST00000489443 TMEM256Q8N2U0 113 aa11.29□□□□□ -0.6
LMX1A-204ENST00000489443 GNPNAT1Q96EK6 184 aaPredicted RBP11.29□□□□□ -0.6
LMX1A-204ENST00000489443 AGPAT4-IT1Q9H0P7 198 aa11.29□□□□□ -0.6
LMX1A-204ENST00000489443 Q9H3A6 140 aa11.29□□□□□ -0.6
LMX1A-204ENST00000489443 MBP02144 154 aa11.28□□□□□ -0.6
LMX1A-204ENST00000489443 CSN1S1P47710 185 aa11.28□□□□□ -0.6
LMX1A-204ENST00000489443 CDC34P49427 236 aaPredicted RBP11.28□□□□□ -0.6
LMX1A-204ENST00000489443 FAM222AQ5U5X8 452 aa11.28□□□□□ -0.6
LMX1A-204ENST00000489443 GFI1BQ5VTD9 330 aa11.28□□□□□ -0.6
LMX1A-204ENST00000489443 PQLC2Q6ZP29 291 aa11.28□□□□□ -0.6
LMX1A-204ENST00000489443 LYPD1Q8N2G4 141 aa11.28□□□□□ -0.6
LMX1A-204ENST00000489443 LINC00477Q96M19 166 aa11.28□□□□□ -0.6
LMX1A-204ENST00000489443 ODF3Q96PU9 254 aa11.28□□□□□ -0.6
LMX1A-204ENST00000489443 YTHDF2Q9Y5A9 579 aaKnown RBP11.28□□□□□ -0.6
LMX1A-204ENST00000489443 C11orf94C9JXX5 98 aa11.27□□□□□ -0.61
LMX1A-204ENST00000489443 TAAR5O14804 337 aa11.27□□□□□ -0.61
LMX1A-204ENST00000489443 ARL14EPLP0DKL9 152 aa11.27□□□□□ -0.61
LMX1A-204ENST00000489443 AZU1P20160 251 aa11.27□□□□□ -0.61
LMX1A-204ENST00000489443 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
LMX1A-204ENST00000489443 C9orf47Q6ZRZ4 202 aa11.27□□□□□ -0.61
LMX1A-204ENST00000489443 C2CD4CQ8TF44 421 aa11.27□□□□□ -0.61
LMX1A-204ENST00000489443 RAB24Q969Q5 203 aa11.27□□□□□ -0.61
LMX1A-204ENST00000489443 HYLS1Q96M11 299 aa11.27□□□□□ -0.61
LMX1A-204ENST00000489443 VGLL1Q99990 258 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms