RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 BTN1A1Q13410 526 aa9.55□□□□□ -0.88
UFD1-209ENST00000489406 TOR2AQ5JU69 321 aa9.55□□□□□ -0.88
UFD1-209ENST00000489406 GPR107Q5VW38 600 aa9.55□□□□□ -0.88
UFD1-209ENST00000489406 OR10G4Q8NGN3 311 aa9.55□□□□□ -0.88
UFD1-209ENST00000489406 DNAJC30Q96LL9 226 aa9.55□□□□□ -0.88
UFD1-209ENST00000489406 ODF3Q96PU9 254 aa9.55□□□□□ -0.88
UFD1-209ENST00000489406 SSR3Q9UNL2 185 aa9.55□□□□□ -0.88
UFD1-209ENST00000489406 PMS2P5A8MQ11 134 aa9.54□□□□□ -0.88
UFD1-209ENST00000489406 MPDU1O75352 247 aa9.54□□□□□ -0.88
UFD1-209ENST00000489406 ATP5HO75947 161 aa9.54□□□□□ -0.88
UFD1-209ENST00000489406 FAM122CQ6P4D5 195 aa9.54□□□□□ -0.88
UFD1-209ENST00000489406 RMI2Q96E14 147 aa9.54□□□□□ -0.88
UFD1-209ENST00000489406 ZNF486Q96H40 463 aaPredicted RBP9.54□□□□□ -0.88
UFD1-209ENST00000489406 ZNF331Q9NQX6 463 aaPredicted RBP9.54□□□□□ -0.88
UFD1-209ENST00000489406 GGTLC3B5MD39 225 aa9.53□□□□□ -0.88
UFD1-209ENST00000489406 RNASE4P34096 147 aaKnown RBP9.53□□□□□ -0.88
UFD1-209ENST00000489406 RAP2BP61225 183 aa9.53□□□□□ -0.88
UFD1-209ENST00000489406 LHFPL5Q8TAF8 219 aa9.53□□□□□ -0.88
UFD1-209ENST00000489406 DTD1Q8TEA8 209 aa9.53□□□□□ -0.88
UFD1-209ENST00000489406 DUSP21Q9H596 190 aa9.53□□□□□ -0.88
UFD1-209ENST00000489406 HIGD1AQ9Y241 93 aa9.53□□□□□ -0.88
UFD1-209ENST00000489406 RGS13O14921 159 aa9.52□□□□□ -0.89
UFD1-209ENST00000489406 PFN1P07737 140 aaKnown RBP9.52□□□□□ -0.89
UFD1-209ENST00000489406 CLEC2LP0C7M8 214 aa9.52□□□□□ -0.89
UFD1-209ENST00000489406 MXD1Q05195 221 aa9.52□□□□□ -0.89
UFD1-209ENST00000489406 PACRGLQ8N7B6 248 aa9.52□□□□□ -0.89
UFD1-209ENST00000489406 OR1S1Q8NH92 325 aa9.52□□□□□ -0.89
UFD1-209ENST00000489406 ARPC5LQ9BPX5 153 aa9.52□□□□□ -0.89
UFD1-209ENST00000489406 TXNL4BQ9NX01 149 aaKnown RBP9.52□□□□□ -0.89
UFD1-209ENST00000489406 COPZ2Q9P299 210 aa9.52□□□□□ -0.89
UFD1-209ENST00000489406 TPRKBQ9Y3C4 175 aa9.52□□□□□ -0.89
UFD1-209ENST00000489406 KIF25-AS1Q9Y6Z4 181 aa9.52□□□□□ -0.89
UFD1-209ENST00000489406 H3BTX0 84 aa9.51□□□□□ -0.89
UFD1-209ENST00000489406 PHOX2AO14813 284 aa9.51□□□□□ -0.89
UFD1-209ENST00000489406 PITX3O75364 302 aa9.51□□□□□ -0.89
UFD1-209ENST00000489406 CDS2O95674 445 aa9.51□□□□□ -0.89
UFD1-209ENST00000489406 ANXA7P20073 488 aaKnown RBP9.51□□□□□ -0.89
UFD1-209ENST00000489406 REG3GQ6UW15 175 aa9.51□□□□□ -0.89
UFD1-209ENST00000489406 LCN15Q6UWW0 184 aa9.51□□□□□ -0.89
UFD1-209ENST00000489406 SELENOHQ8IZQ5 122 aaKnown RBP9.51□□□□□ -0.89
UFD1-209ENST00000489406 SLC50A1Q9BRV3 221 aa9.51□□□□□ -0.89
UFD1-209ENST00000489406 RBKSQ9H477 322 aa9.51□□□□□ -0.89
UFD1-209ENST00000489406 IGHV3-16A0A0C4DH30 117 aa9.5□□□□□ -0.89
UFD1-209ENST00000489406 KLLNB2CW77 178 aa9.5□□□□□ -0.89
UFD1-209ENST00000489406 MRPS12O15235 138 aaKnown RBP9.5□□□□□ -0.89
UFD1-209ENST00000489406 OR5G3P0C626 314 aa9.5□□□□□ -0.89
UFD1-209ENST00000489406 PRSS3P35030 304 aa9.5□□□□□ -0.89
UFD1-209ENST00000489406 C14orf177Q52M58 125 aa9.5□□□□□ -0.89
UFD1-209ENST00000489406 Q6ZQT7 251 aa9.5□□□□□ -0.89
UFD1-209ENST00000489406 S100A16Q96FQ6 103 aaKnown RBP9.5□□□□□ -0.89
UFD1-209ENST00000489406 TMEM222Q9H0R3 208 aa9.5□□□□□ -0.89
UFD1-209ENST00000489406 PAIP2BQ9ULR5 123 aaKnown RBP9.5□□□□□ -0.89
UFD1-209ENST00000489406 IGHV1OR15-1A0A075B7D0 117 aa9.49□□□□□ -0.89
UFD1-209ENST00000489406 SLC17A3O00476 420 aa9.49□□□□□ -0.89
UFD1-209ENST00000489406 CXCL2P19875 107 aa9.49□□□□□ -0.89
UFD1-209ENST00000489406 SDC2P34741 201 aa9.49□□□□□ -0.89
UFD1-209ENST00000489406 ATP5IP56385 69 aaPredicted RBP9.49□□□□□ -0.89
UFD1-209ENST00000489406 CCDC71LQ8N9Z2 235 aa9.49□□□□□ -0.89
UFD1-209ENST00000489406 GLYATL2Q8WU03 294 aa9.49□□□□□ -0.89
UFD1-209ENST00000489406 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
UFD1-209ENST00000489406 ZC2HC1AQ96GY0 325 aa9.49□□□□□ -0.89
UFD1-209ENST00000489406 C8orf4Q9NR00 106 aa9.49□□□□□ -0.89
UFD1-209ENST00000489406 HYPMO75409 117 aa9.48□□□□□ -0.89
UFD1-209ENST00000489406 SULT1A3P0DMM9 295 aa9.48□□□□□ -0.89
UFD1-209ENST00000489406 SULT1A4P0DMN0 295 aa9.48□□□□□ -0.89
UFD1-209ENST00000489406 ERCC8Q13216 396 aa9.48□□□□□ -0.89
UFD1-209ENST00000489406 OPCMLQ14982 345 aa9.48□□□□□ -0.89
UFD1-209ENST00000489406 VWC2Q2TAL6 325 aa9.48□□□□□ -0.89
UFD1-209ENST00000489406 TMEM268Q5VZI3 342 aa9.48□□□□□ -0.89
UFD1-209ENST00000489406 PRSS48Q7RTY5 328 aa9.48□□□□□ -0.89
UFD1-209ENST00000489406 C9orf163Q8N9P6 203 aa9.48□□□□□ -0.89
UFD1-209ENST00000489406 OR4C5Q8NGB2 326 aa9.48□□□□□ -0.89
UFD1-209ENST00000489406 HSPB7Q9UBY9 170 aa9.48□□□□□ -0.89
UFD1-209ENST00000489406 CACFD1Q9UGQ2 172 aa9.48□□□□□ -0.89
UFD1-209ENST00000489406 TRAV4A0A0B4J268 109 aa9.47□□□□□ -0.89
UFD1-209ENST00000489406 FABP12A6NFH5 140 aa9.47□□□□□ -0.89
UFD1-209ENST00000489406 RAB11AP62491 216 aa9.47□□□□□ -0.89
UFD1-209ENST00000489406 SDIM1Q6ZPB5 146 aa9.47□□□□□ -0.89
UFD1-209ENST00000489406 ACOT7LQ6ZUV0 252 aa9.47□□□□□ -0.89
UFD1-209ENST00000489406 RASL10AQ92737 203 aa9.47□□□□□ -0.89
UFD1-209ENST00000489406 GTSF1LQ9H1H1 148 aa9.47□□□□□ -0.89
UFD1-209ENST00000489406 B3GALNT1O75752 331 aa9.46□□□□□ -0.9
UFD1-209ENST00000489406 GPX1P07203 203 aa9.46□□□□□ -0.9
UFD1-209ENST00000489406 OR4E1P0C645 316 aa9.46□□□□□ -0.9
UFD1-209ENST00000489406 GATA1P15976 413 aaPredicted RBP9.46□□□□□ -0.9
UFD1-209ENST00000489406 LHFPL1Q86WI0 220 aa9.46□□□□□ -0.9
UFD1-209ENST00000489406 GPX8Q8TED1 209 aa9.46□□□□□ -0.9
UFD1-209ENST00000489406 A0A087WYN8 130 aa9.45□□□□□ -0.9
UFD1-209ENST00000489406 TEX13DA0A0J9YY54 714 aaPredicted RBP9.45□□□□□ -0.9
UFD1-209ENST00000489406 IL5P05113 134 aa9.45□□□□□ -0.9
UFD1-209ENST00000489406 AKR1C1Q04828 323 aa9.45□□□□□ -0.9
UFD1-209ENST00000489406 DPPA3Q6W0C5 159 aa9.45□□□□□ -0.9
UFD1-209ENST00000489406 OR4D10Q8NGI6 311 aa9.45□□□□□ -0.9
UFD1-209ENST00000489406 LINC00869P0C866 280 aa9.44□□□□□ -0.9
UFD1-209ENST00000489406 CIRBPQ14011 172 aaKnown RBP9.44□□□□□ -0.9
UFD1-209ENST00000489406 PRR9Q5T870 116 aa9.44□□□□□ -0.9
UFD1-209ENST00000489406 DGAT2L7PQ6IED9 249 aa9.44□□□□□ -0.9
UFD1-209ENST00000489406 CYP2G1PQ6ZSU1 146 aa9.44□□□□□ -0.9
UFD1-209ENST00000489406 SLC25A29Q8N8R3 303 aa9.44□□□□□ -0.9
UFD1-209ENST00000489406 OR13C8Q8NGS7 320 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms