RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ENKURQ8TC29 256 aa8.42□□□□□ -1.06
CCHCR1-215ENST00000488920 PFDN5Q99471 154 aa8.42□□□□□ -1.06
CCHCR1-215ENST00000488920 GPN1Q9HCN4 374 aaPredicted RBP8.42□□□□□ -1.06
CCHCR1-215ENST00000488920 ZNF586Q9NXT0 402 aa8.42□□□□□ -1.06
CCHCR1-215ENST00000488920 HECTD4Q9Y4D8 3996 aa8.42□□□□□ -1.06
CCHCR1-215ENST00000488920 F5H768 121 aa8.41□□□□□ -1.06
CCHCR1-215ENST00000488920 J3KRW8 73 aa8.41□□□□□ -1.06
CCHCR1-215ENST00000488920 UPK1BO75841 260 aa8.41□□□□□ -1.06
CCHCR1-215ENST00000488920 CT45A10P0DMU9 189 aa8.41□□□□□ -1.06
CCHCR1-215ENST00000488920 NHLH2Q02577 135 aa8.41□□□□□ -1.06
CCHCR1-215ENST00000488920 GUK1Q16774 197 aa8.41□□□□□ -1.06
CCHCR1-215ENST00000488920 ATP6V1FQ16864 119 aa8.41□□□□□ -1.06
CCHCR1-215ENST00000488920 LINC00336Q6ZUF6 198 aa8.41□□□□□ -1.06
CCHCR1-215ENST00000488920 CHAC2Q8WUX2 184 aa8.41□□□□□ -1.06
CCHCR1-215ENST00000488920 C16orf74Q96GX8 76 aa8.41□□□□□ -1.06
CCHCR1-215ENST00000488920 NOP10Q9NPE3 64 aaKnown RBP8.41□□□□□ -1.06
CCHCR1-215ENST00000488920 TIMM8BQ9Y5J9 83 aaPredicted RBP8.41□□□□□ -1.06
CCHCR1-215ENST00000488920 CBY3A6NI87 242 aa8.4□□□□□ -1.06
CCHCR1-215ENST00000488920 H7BYZ3 331 aa8.4□□□□□ -1.06
CCHCR1-215ENST00000488920 RTL8CO15255 209 aa8.4□□□□□ -1.06
CCHCR1-215ENST00000488920 IFITM3Q01628 133 aa8.4□□□□□ -1.06
CCHCR1-215ENST00000488920 LGALS9BQ3B8N2 356 aa8.4□□□□□ -1.06
CCHCR1-215ENST00000488920 RNF212Q495C1 297 aa8.4□□□□□ -1.06
CCHCR1-215ENST00000488920 GCSAMLQ5JQS6 135 aa8.4□□□□□ -1.06
CCHCR1-215ENST00000488920 GFI1BQ5VTD9 330 aa8.4□□□□□ -1.06
CCHCR1-215ENST00000488920 THAP6Q8TBB0 222 aa8.4□□□□□ -1.06
CCHCR1-215ENST00000488920 KRTAP17-1Q9BYP8 105 aa8.4□□□□□ -1.06
CCHCR1-215ENST00000488920 TRBV19A0A075B6N1 114 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 A6NHS1 94 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 RLN2P04090 185 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 ATP5G1P05496 136 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 PYYP10082 97 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 ATP5G3P48201 142 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 LRRC37A5PQ49AS3 106 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 ZNF493Q6ZR52 646 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 CCDC28AQ8IWP9 274 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 C15orf53Q8NAA6 179 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 RNASE8Q8TDE3 154 aaKnown RBP8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 NPCDR1Q9BY65 106 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 OR5AC2Q9NZP5 309 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 TMEM14CQ9P0S9 112 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 TIMM9Q9Y5J7 89 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 HERC2O95714 4834 aa8.39□□□□□ -1.07
CCHCR1-215ENST00000488920 TRAV12-3A0A0B4J271 114 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 PRSS29PA6NIE9 313 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 E5RGE8 158 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 NPIPB6E9PJ23 425 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 INMT-MINDY4F8WBC2 141 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 H0YIZ8 118 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 M0R3E3 92 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 MPDU1O75352 247 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 NDUFB4O95168 129 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 NUDT3O95989 172 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 HIST1H1EP10412 219 aaKnown RBP8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 LEPP41159 167 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 ERCC8Q13216 396 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 CLINT1Q14677 625 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 Q6ZR54 194 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 OR5C1Q8NGR4 320 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 TMEM263Q8WUH6 116 aaKnown RBP8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 BLNKQ8WV28 456 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 C20orf144Q9BQM9 153 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 ATG101Q9BSB4 218 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 NMES1Q9C002 83 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 SLC25A31Q9H0C2 315 aa8.38□□□□□ -1.07
CCHCR1-215ENST00000488920 DNAH2Q9P225 4427 aa8.37□□□□□ -1.07
CCHCR1-215ENST00000488920 A0A1B0GVY2 172 aa8.37□□□□□ -1.07
CCHCR1-215ENST00000488920 ZNF253O75346 499 aa8.37□□□□□ -1.07
CCHCR1-215ENST00000488920 EXOC3-AS1Q8N2X6 119 aa8.37□□□□□ -1.07
CCHCR1-215ENST00000488920 MRPL53Q96EL3 112 aaKnown RBP8.37□□□□□ -1.07
CCHCR1-215ENST00000488920 ODF3Q96PU9 254 aa8.37□□□□□ -1.07
CCHCR1-215ENST00000488920 SLC25A2Q9BXI2 301 aa8.37□□□□□ -1.07
CCHCR1-215ENST00000488920 FAT2Q9NYQ8 4349 aa8.37□□□□□ -1.07
CCHCR1-215ENST00000488920 GAGE12BA1L429 117 aa8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 PRAF2O60831 178 aa8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 GAGE7O76087 117 aa8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 GAGE12FP0CL80 117 aa8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 GAGE12GP0CL81 117 aa8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 GAGE12IP0CL82 117 aa8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 H2BFSP57053 126 aa8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 CYCSP99999 105 aaKnown RBP8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 MIR17HGQ75NE6 70 aa8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 FAM167A-AS1Q96KT0 104 aa8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 AGPAT4-IT1Q9H0P7 198 aa8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 PTTG2Q9NZH5 202 aa8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 PRELID1Q9Y255 219 aa8.36□□□□□ -1.07
CCHCR1-215ENST00000488920 RNASE4P34096 147 aaKnown RBP8.35□□□□□ -1.07
CCHCR1-215ENST00000488920 FAM3BP58499 235 aaPredicted RBP8.35□□□□□ -1.07
CCHCR1-215ENST00000488920 CD300CQ08708 224 aa8.35□□□□□ -1.07
CCHCR1-215ENST00000488920 OR5I1Q13606 314 aa8.35□□□□□ -1.07
CCHCR1-215ENST00000488920 ICAM4Q14773 271 aa8.35□□□□□ -1.07
CCHCR1-215ENST00000488920 RNF141Q8WVD5 230 aa8.35□□□□□ -1.07
CCHCR1-215ENST00000488920 LINC00477Q96M19 166 aa8.35□□□□□ -1.07
CCHCR1-215ENST00000488920 MARVELD1Q9BSK0 173 aa8.35□□□□□ -1.07
CCHCR1-215ENST00000488920 WDR61Q9GZS3 305 aaKnown RBP8.35□□□□□ -1.07
CCHCR1-215ENST00000488920 DNAH17Q9UFH2 4485 aa8.35□□□□□ -1.07
CCHCR1-215ENST00000488920 KIAA1109Q2LD37 5005 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 IGKV2-40A0A087WW87 121 aaPredicted RBP8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 C7orf71A4D174 169 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 SNURFLB1AK76 121 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms