RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 LAMTOR2Q9Y2Q5 125 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 ASB4Q9Y574 426 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 NUBP2Q9Y5Y2 271 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 KDM6AO15550 1401 aaPredicted RBP0.6□□□□□ -2.31
CD46-215ENST00000488596 COL24A1Q17RW2 1714 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 MGAMO43451 1857 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 FANCMQ8IYD8 2048 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 PTPRFP10586 1907 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 MYH1P12882 1939 aa0.6□□□□□ -2.31
CD46-215ENST00000488596 MYO18AQ92614 2054 aaKnown RBP0.6□□□□□ -2.31
CD46-215ENST00000488596 RTL9Q8NET4 1388 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 KIAA1107Q9UPP5 1409 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 TRAV10A0A0B4J240 114 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 M0R233 179 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 KPNA4O00629 521 aaPredicted RBP0.59□□□□□ -2.31
CD46-215ENST00000488596 RER1O15258 196 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 MT-ND6P03923 174 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 OR10J4P0C629 311 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 NBEAP1P0C6P0 100 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 FABP2P12104 132 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 S100A11P31949 105 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 SDC2P34741 201 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 RAB5CP51148 216 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 POLR2HP52434 150 aaKnown RBP0.59□□□□□ -2.31
CD46-215ENST00000488596 DSCR4P56555 118 aaPredicted RBP0.59□□□□□ -2.31
CD46-215ENST00000488596 PSG9Q00887 426 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 EIF3IQ13347 325 aaKnown RBP0.59□□□□□ -2.31
CD46-215ENST00000488596 HRCT1Q6UXD1 115 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 LINC00322Q6ZN03 302 aaPredicted RBP0.59□□□□□ -2.31
CD46-215ENST00000488596 ZNF833PQ6ZTB9 187 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 PYDC1Q8WXC3 89 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 CHCHD1Q96BP2 118 aaKnown RBP0.59□□□□□ -2.31
CD46-215ENST00000488596 CARD19Q96LW7 228 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 LINC00052Q96N35 136 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 CCDC115Q96NT0 180 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 TCEAL2Q9H3H9 227 aaPredicted RBP0.59□□□□□ -2.31
CD46-215ENST00000488596 LRTM1Q9HBL6 345 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 C19orf12Q9NSK7 152 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 ORMDL1Q9P0S3 153 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 TMEM14CQ9P0S9 112 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 TRAPPC2LQ9UL33 140 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 GINS2Q9Y248 185 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 RNF11Q9Y3C5 154 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 MED31Q9Y3C7 131 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 HSPB11Q9Y547 144 aa0.59□□□□□ -2.31
CD46-215ENST00000488596 TANC2Q9HCD6 1990 aa0.59□□□□□ -2.32
CD46-215ENST00000488596 USP54Q70EL1 1684 aa0.59□□□□□ -2.32
CD46-215ENST00000488596 DLC1Q96QB1 1528 aa0.59□□□□□ -2.32
CD46-215ENST00000488596 KDM5CP41229 1560 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 ZGRF1Q86YA3 2104 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 FHAD1B1AJZ9 1412 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 BCL9O00512 1426 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 TENM3Q9P273 2699 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 IGHV1-58A0A0C4DH39 117 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 hDV103S1A0JD37 113 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 OR2T8A6NH00 312 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 ARL5CA6NH57 179 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 E7EUB6 86 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 J3KT08 172 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 LYRM1O43325 122 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 ERC2-IT1O76042 136 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 IGLV1-51P01701 117 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 RPL7P18124 248 aaKnown RBP0.58□□□□□ -2.32
CD46-215ENST00000488596 EFNA4P52798 201 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 NDUFA6P56556 154 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 CDK6Q00534 326 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 VMA21Q3ZAQ7 101 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 C1orf134Q5TEV5 83 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 TMEM14EPQ6UXP3 125 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 PHF5AQ7RTV0 110 aaKnown RBP0.58□□□□□ -2.32
CD46-215ENST00000488596 ARPINQ7Z6K5 226 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 LRRC18Q8N456 261 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 FAM216BQ8N7L0 139 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 TMEM35BQ8NCS4 154 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 OR4B1Q8NGF8 309 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 OR9Q1Q8NGQ5 310 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 OR5H6Q8NGV6 325 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 Q8TAT8 98 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 RAB37Q96AX2 223 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 ZC2HC1AQ96GY0 325 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 HYLS1Q96M11 299 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 MCEEQ96PE7 176 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 TP53RKQ96S44 253 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 AIF1LQ9BQI0 150 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 GGACTQ9BVM4 153 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 NAT8BQ9UHF3 227 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 FBN2P35556 2912 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 CECR2Q9BXF3 1484 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 ASCC3Q8N3C0 2202 aaKnown RBP0.58□□□□□ -2.32
CD46-215ENST00000488596 ANK1P16157 1881 aa0.58□□□□□ -2.32
CD46-215ENST00000488596 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.58□□□□□ -2.32
CD46-215ENST00000488596 SNRNP200O75643 2136 aaKnown RBP0.58□□□□□ -2.32
CD46-215ENST00000488596 KIAA1549LQ6ZVL6 1849 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 A2MP01023 1474 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 ARAP1Q96P48 1450 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 TRAV27A0A087WT01 109 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 LOC107984640A0A0U1RRK4 108 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 C5orf58C9J3I9 102 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 CXCL8P10145 99 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 FABP4P15090 132 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms