RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 VSIG2Q96IQ7 327 aa13.09□□□□□ -0.31
GGPS1-206ENST00000488594 TRGV2A0A075B6R0 118 aa13.08□□□□□ -0.31
GGPS1-206ENST00000488594 SIVA1O15304 175 aa13.08□□□□□ -0.31
GGPS1-206ENST00000488594 COX7A2P2O60397 106 aa13.08□□□□□ -0.31
GGPS1-206ENST00000488594 NOL3O60936 208 aaKnown RBP13.08□□□□□ -0.31
GGPS1-206ENST00000488594 CCNKO75909 580 aa13.08□□□□□ -0.31
GGPS1-206ENST00000488594 INAFM2P0DMQ5 153 aa13.08□□□□□ -0.31
GGPS1-206ENST00000488594 ZNF680Q8NEM1 530 aa13.08□□□□□ -0.31
GGPS1-206ENST00000488594 TRAV12-3A0A0B4J271 114 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 C9orf170A2RU37 121 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 SLC17A3O00476 420 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 TSC22D2O75157 780 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 SNRPCP09234 159 aaKnown RBP13.07□□□□□ -0.32
GGPS1-206ENST00000488594 IGLC2P0DOY2 106 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 TAS2R30P59541 319 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 ERVFC1-1P60608 527 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 GUK1Q16774 197 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 LYPD1Q8N2G4 141 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 ZNF431Q8TF32 576 aaPredicted RBP13.07□□□□□ -0.32
GGPS1-206ENST00000488594 GGACTQ9BVM4 153 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 DMBT1Q9UGM3 2413 aaPredicted RBP13.07□□□□□ -0.32
GGPS1-206ENST00000488594 NPIPB6E9PJ23 425 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 J3KRW8 73 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 AGPAT2O15120 278 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 CT45A10P0DMU9 189 aa13.07□□□□□ -0.32
GGPS1-206ENST00000488594 ZBTB8BQ8NAP8 495 aaPredicted RBP13.07□□□□□ -0.32
GGPS1-206ENST00000488594 HERC1Q15751 4861 aa13.06□□□□□ -0.32
GGPS1-206ENST00000488594 SLC25A5P05141 298 aaKnown RBP13.06□□□□□ -0.32
GGPS1-206ENST00000488594 C10orf113Q5VZT2 155 aa13.06□□□□□ -0.32
GGPS1-206ENST00000488594 TMEM37Q8WXS4 190 aa13.06□□□□□ -0.32
GGPS1-206ENST00000488594 SAT2Q96F10 170 aaPredicted RBP13.06□□□□□ -0.32
GGPS1-206ENST00000488594 V9GYH0 126 aa13.06□□□□□ -0.32
GGPS1-206ENST00000488594 LINC00854A0A1B0GVQ3 168 aa13.05□□□□□ -0.32
GGPS1-206ENST00000488594 H3BMQ9 156 aa13.05□□□□□ -0.32
GGPS1-206ENST00000488594 H3BQ15 152 aa13.05□□□□□ -0.32
GGPS1-206ENST00000488594 H3BTX0 84 aa13.05□□□□□ -0.32
GGPS1-206ENST00000488594 OPCMLQ14982 345 aa13.05□□□□□ -0.32
GGPS1-206ENST00000488594 NFE4Q86UQ8 179 aa13.05□□□□□ -0.32
GGPS1-206ENST00000488594 GSN-AS1Q9NRJ2 163 aa13.05□□□□□ -0.32
GGPS1-206ENST00000488594 XGP55808 180 aa13.04□□□□□ -0.32
GGPS1-206ENST00000488594 MORN5Q5VZ52 161 aa13.04□□□□□ -0.32
GGPS1-206ENST00000488594 C11orf72Q8NBR9 251 aa13.04□□□□□ -0.32
GGPS1-206ENST00000488594 FRZBQ92765 325 aa13.04□□□□□ -0.32
GGPS1-206ENST00000488594 LINC00467Q9BRT7 94 aa13.04□□□□□ -0.32
GGPS1-206ENST00000488594 FUT9Q9Y231 359 aa13.04□□□□□ -0.32
GGPS1-206ENST00000488594 ICOSQ9Y6W8 199 aa13.04□□□□□ -0.32
GGPS1-206ENST00000488594 TRGV1A0A0A0MS02 117 aa13.03□□□□□ -0.32
GGPS1-206ENST00000488594 C7orf71A4D174 169 aa13.03□□□□□ -0.32
GGPS1-206ENST00000488594 ZNF253O75346 499 aa13.03□□□□□ -0.32
GGPS1-206ENST00000488594 NXPH4O95158 308 aa13.03□□□□□ -0.32
GGPS1-206ENST00000488594 SCGB1D2O95969 90 aa13.03□□□□□ -0.32
GGPS1-206ENST00000488594 RAB31Q13636 194 aa13.03□□□□□ -0.32
GGPS1-206ENST00000488594 Q6ZRG5 221 aa13.03□□□□□ -0.32
GGPS1-206ENST00000488594 MRPL53Q96EL3 112 aaKnown RBP13.03□□□□□ -0.32
GGPS1-206ENST00000488594 MGST2Q99735 147 aa13.03□□□□□ -0.32
GGPS1-206ENST00000488594 DNAJC4Q9NNZ3 241 aa13.03□□□□□ -0.32
GGPS1-206ENST00000488594 PAX4O43316 350 aa13.02□□□□□ -0.33
GGPS1-206ENST00000488594 ZNF324O75467 553 aaPredicted RBP13.02□□□□□ -0.33
GGPS1-206ENST00000488594 NDUFB6O95139 128 aa13.02□□□□□ -0.33
GGPS1-206ENST00000488594 IFNA5P01569 189 aa13.02□□□□□ -0.33
GGPS1-206ENST00000488594 S100A5P33763 92 aa13.02□□□□□ -0.33
GGPS1-206ENST00000488594 IAH1Q2TAA2 248 aaPredicted RBP13.02□□□□□ -0.33
GGPS1-206ENST00000488594 ANXA2RQ3ZCQ2 193 aa13.02□□□□□ -0.33
GGPS1-206ENST00000488594 Q5VSD8 79 aa13.02□□□□□ -0.33
GGPS1-206ENST00000488594 OR4E1P0C645 316 aa13.01□□□□□ -0.33
GGPS1-206ENST00000488594 ARL16Q0P5N6 197 aa13.01□□□□□ -0.33
GGPS1-206ENST00000488594 EIF4E3Q8N5X7 224 aaKnown RBP13.01□□□□□ -0.33
GGPS1-206ENST00000488594 RCL1Q9Y2P8 373 aaKnown RBP13.01□□□□□ -0.33
GGPS1-206ENST00000488594 TRAV9-2A0A087WT02 112 aa13□□□□□ -0.33
GGPS1-206ENST00000488594 NAP1L6A6NFF2 107 aa13□□□□□ -0.33
GGPS1-206ENST00000488594 KLLNB2CW77 178 aa13□□□□□ -0.33
GGPS1-206ENST00000488594 SPINK4O60575 86 aa13□□□□□ -0.33
GGPS1-206ENST00000488594 CAMLGP49069 296 aa13□□□□□ -0.33
GGPS1-206ENST00000488594 TCL1AP56279 114 aa13□□□□□ -0.33
GGPS1-206ENST00000488594 SLAQ13239 276 aa13□□□□□ -0.33
GGPS1-206ENST00000488594 IBA57Q5T440 356 aaKnown RBP13□□□□□ -0.33
GGPS1-206ENST00000488594 OR1L4Q8NGR5 311 aa13□□□□□ -0.33
GGPS1-206ENST00000488594 ST6GAL2Q96JF0 529 aa13□□□□□ -0.33
GGPS1-206ENST00000488594 GSKIPQ9P0R6 139 aa13□□□□□ -0.33
GGPS1-206ENST00000488594 PRO0255Q9UI72 69 aa13□□□□□ -0.33
GGPS1-206ENST00000488594 C7orf66A4D0T2 115 aa12.99□□□□□ -0.33
GGPS1-206ENST00000488594 K7EP13 123 aa12.99□□□□□ -0.33
GGPS1-206ENST00000488594 FUSP35637 526 aaKnown RBP eCLIP12.99□□□□□ -0.33
GGPS1-206ENST00000488594 LINC00477Q96M19 166 aa12.99□□□□□ -0.33
GGPS1-206ENST00000488594 PFDN5Q99471 154 aa12.99□□□□□ -0.33
GGPS1-206ENST00000488594 A0A087WTM6 91 aa12.98□□□□□ -0.33
GGPS1-206ENST00000488594 INPP1P49441 399 aa12.98□□□□□ -0.33
GGPS1-206ENST00000488594 MRPL23Q16540 153 aaKnown RBP12.98□□□□□ -0.33
GGPS1-206ENST00000488594 C12orf45Q8N5I9 185 aaPredicted RBP12.98□□□□□ -0.33
GGPS1-206ENST00000488594 FAM19A4Q96LR4 140 aa12.98□□□□□ -0.33
GGPS1-206ENST00000488594 FLVCR2Q9UPI3 526 aa12.98□□□□□ -0.33
GGPS1-206ENST00000488594 PRELID1Q9Y255 219 aa12.98□□□□□ -0.33
GGPS1-206ENST00000488594 KLF12Q9Y4X4 402 aa12.98□□□□□ -0.33
GGPS1-206ENST00000488594 TRAV5A0A0B4J249 113 aa12.97□□□□□ -0.33
GGPS1-206ENST00000488594 MPDU1O75352 247 aa12.97□□□□□ -0.33
GGPS1-206ENST00000488594 NMBP08949 121 aa12.97□□□□□ -0.33
GGPS1-206ENST00000488594 LYPD5Q6UWN5 251 aa12.97□□□□□ -0.33
GGPS1-206ENST00000488594 NRARPQ7Z6K4 114 aa12.97□□□□□ -0.33
GGPS1-206ENST00000488594 TNFRSF18Q9Y5U5 241 aa12.97□□□□□ -0.33
GGPS1-206ENST00000488594 TRBV19A0A075B6N1 114 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms