RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ISOC2Q96AB3 205 aa9.74□□□□□ -0.85
NELFE-209ENST00000488426 ANAPC16Q96DE5 110 aa9.74□□□□□ -0.85
NELFE-209ENST00000488426 UBE2E2Q96LR5 201 aa9.74□□□□□ -0.85
NELFE-209ENST00000488426 LGALS1P09382 135 aaKnown RBP9.73□□□□□ -0.85
NELFE-209ENST00000488426 GALR1P47211 349 aa9.73□□□□□ -0.85
NELFE-209ENST00000488426 CMTM2Q8TAZ6 248 aa9.73□□□□□ -0.85
NELFE-209ENST00000488426 IGF2BP2-AS1Q96M15 143 aa9.73□□□□□ -0.85
NELFE-209ENST00000488426 C17orf77Q96MU5 243 aa9.73□□□□□ -0.85
NELFE-209ENST00000488426 AAMDCQ9H7C9 122 aa9.73□□□□□ -0.85
NELFE-209ENST00000488426 KLF12Q9Y4X4 402 aa9.73□□□□□ -0.85
NELFE-209ENST00000488426 MEGF8Q7Z7M0 2845 aa9.73□□□□□ -0.85
NELFE-209ENST00000488426 TCRAP04437 139 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 CDX1P47902 265 aaPredicted RBP9.72□□□□□ -0.85
NELFE-209ENST00000488426 GNG5P63218 68 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 TMEM183BQ1AE95 376 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 HIST2H2BDQ6DRA6 164 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 UNQ9165/PRO28630Q6UXU0 137 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 GPHB5Q86YW7 130 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 EXOC3-AS1Q8N2X6 119 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 KLHDC1Q8N7A1 406 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 OCC1Q8TAD7 63 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 SMAD5-AS1Q9Y6J3 95 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 PGPEP1LA6NFU8 196 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 IFITM10A6NMD0 228 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 SLC17A3O00476 420 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 PPP1R2P9O14990 202 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 ZNF207O43670 478 aaKnown RBP9.72□□□□□ -0.85
NELFE-209ENST00000488426 FAM106AQ4KMX7 169 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 C16orf54Q6UWD8 224 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 SHISA2Q6UWI4 295 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 SVIPQ8NHG7 77 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 LINC01006Q8NI28 216 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 SMIM12Q96EX1 92 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 FMC1Q96HJ9 113 aa9.72□□□□□ -0.85
NELFE-209ENST00000488426 A0A1W2PS18 150 aa9.71□□□□□ -0.85
NELFE-209ENST00000488426 H7BYZ3 331 aa9.71□□□□□ -0.85
NELFE-209ENST00000488426 K7EMT4 169 aa9.71□□□□□ -0.85
NELFE-209ENST00000488426 APOHP02749 345 aaPredicted RBP9.71□□□□□ -0.85
NELFE-209ENST00000488426 UBE2G1P62253 170 aa9.71□□□□□ -0.85
NELFE-209ENST00000488426 GRAMD2BQ96HH9 432 aa9.71□□□□□ -0.85
NELFE-209ENST00000488426 OR5B12Q96R08 314 aa9.71□□□□□ -0.85
NELFE-209ENST00000488426 SERTM2A0A1B0GWG4 89 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 ZNF785A8K8V0 405 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 K7EN84 100 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 ISLRO14498 428 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 CDPF1Q6NVV7 123 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 GLMPQ8WWB7 406 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 WFDC12Q8WWY7 111 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 SFRP2Q96HF1 295 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 LINC00479Q96M42 142 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 YPEL4Q96NS1 127 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 SLC50A1Q9BRV3 221 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 C16orf95Q9H693 158 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 DAZ1Q9NQZ3 744 aaKnown RBP9.7□□□□□ -0.86
NELFE-209ENST00000488426 RPH3ALQ9UNE2 315 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 TRBV6-1A0A0K0K1D8 114 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 ZNF320A2RRD8 509 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 K7EQM0 130 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 NDUFA7O95182 113 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 IGLV2-8P01709 118 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 RAB5AP20339 215 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 CSN1S1P47710 185 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 RPEL1Q2QD12 228 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 ZNF331Q9NQX6 463 aaPredicted RBP9.7□□□□□ -0.86
NELFE-209ENST00000488426 AURKAIP1Q9NWT8 199 aaPredicted RBP9.7□□□□□ -0.86
NELFE-209ENST00000488426 UFC1Q9Y3C8 167 aa9.7□□□□□ -0.86
NELFE-209ENST00000488426 NOTCH1P46531 2555 aa9.69□□□□□ -0.86
NELFE-209ENST00000488426 IGHV3-49A0A0A0MS15 119 aa9.69□□□□□ -0.86
NELFE-209ENST00000488426 TRAV34A0A0B4J273 112 aa9.69□□□□□ -0.86
NELFE-209ENST00000488426 IGHV3-66A0A0C4DH42 116 aa9.69□□□□□ -0.86
NELFE-209ENST00000488426 IGHV7-4-1A0A0J9YVY3 117 aa9.69□□□□□ -0.86
NELFE-209ENST00000488426 GCGP01275 180 aa9.69□□□□□ -0.86
NELFE-209ENST00000488426 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.69□□□□□ -0.86
NELFE-209ENST00000488426 BAGE2Q86Y30 109 aa9.69□□□□□ -0.86
NELFE-209ENST00000488426 FAM24BQ8N5W8 94 aa9.69□□□□□ -0.86
NELFE-209ENST00000488426 RNF114Q9Y508 228 aa9.69□□□□□ -0.86
NELFE-209ENST00000488426 IGHV3OR16-13A0A075B7E8 117 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 IGHV3-74A0A0B4J1X5 117 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 BMI1P35226 326 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 ELOBQ15370 118 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 PRR31Q5SQ13 230 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 GOLT1AQ6ZVE7 132 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 TMEM75Q8N9X5 138 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 OR10G8Q8NGN5 311 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 WIPF2Q8TF74 440 aaPredicted RBP9.68□□□□□ -0.86
NELFE-209ENST00000488426 GPR61Q9BZJ8 451 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 FBLL1A6NHQ2 334 aaKnown RBP9.68□□□□□ -0.86
NELFE-209ENST00000488426 DIRC3C9JPN6 131 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 TSTD3H0UI37 97 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 LGALS9O00182 355 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 LTAP01374 205 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 PROK1P58294 105 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 C4orf3Q8WVX3 66 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 IMMP2LQ96T52 175 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 CLEC5AQ9NY25 188 aa9.68□□□□□ -0.86
NELFE-209ENST00000488426 IGHV4OR15-8A0A075B7B6 117 aa9.67□□□□□ -0.86
NELFE-209ENST00000488426 A0A087WW49 117 aa9.67□□□□□ -0.86
NELFE-209ENST00000488426 A8MWP6 167 aa9.67□□□□□ -0.86
NELFE-209ENST00000488426 M0R3E3 92 aa9.67□□□□□ -0.86
NELFE-209ENST00000488426 MGST1P10620 155 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms