RNA–Protein interactions for RNA: ENST00000488277.1

EPB41-211, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 262 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-211ENST00000488277 TRAPPC8Q9Y2L5 1435 aa0.72□□□□□ -2.29
EPB41-211ENST00000488277 ZCCHC11Q5TAX3 1644 aaKnown RBP0.71□□□□□ -2.3
EPB41-211ENST00000488277 RTL9Q8NET4 1388 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 TNRC6BQ9UPQ9 1833 aaKnown RBP0.71□□□□□ -2.3
EPB41-211ENST00000488277 KMT2BQ9UMN6 2715 aaPredicted RBP0.71□□□□□ -2.3
EPB41-211ENST00000488277 NISCHQ9Y2I1 1504 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 EXPH5Q8NEV8 1989 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 A0A087WSZ3 146 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 IGHV1-58A0A0C4DH39 117 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 PRORSD1PA6NEY8 169 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 H3BRM9 83 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 INE1O15225 51 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 CCL25O15444 150 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 KLF7O75840 302 aaPredicted RBP0.71□□□□□ -2.3
EPB41-211ENST00000488277 FABP4P15090 132 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 CIRBPQ14011 172 aaKnown RBP0.71□□□□□ -2.3
EPB41-211ENST00000488277 VMA21Q3ZAQ7 101 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 TOMM20LQ6UXN7 152 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 LINC00305Q7Z4B0 112 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 OR5AS1Q8N127 324 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 TMEM35BQ8NCS4 154 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 OR4B1Q8NGF8 309 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 OR9Q1Q8NGQ5 310 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 ZNF431Q8TF32 576 aaPredicted RBP0.71□□□□□ -2.3
EPB41-211ENST00000488277 SKA2Q8WVK7 121 aaPredicted RBP0.71□□□□□ -2.3
EPB41-211ENST00000488277 PRELID3AQ96N28 172 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 LXNQ9BS40 222 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 TMEM138Q9NPI0 162 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 NIT2Q9NQR4 276 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 TMEM14CQ9P0S9 112 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 TPRKBQ9Y3C4 175 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 CACNA1BQ00975 2339 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 POLEQ07864 2286 aa0.71□□□□□ -2.3
EPB41-211ENST00000488277 A0A096LPI6 279 aa0.7□□□□□ -2.3
EPB41-211ENST00000488277 M0R2N4 97 aa0.7□□□□□ -2.3
EPB41-211ENST00000488277 RPS3P23396 243 aaKnown RBP eCLIP0.7□□□□□ -2.3
EPB41-211ENST00000488277 LINC00322Q6ZN03 302 aaPredicted RBP0.7□□□□□ -2.3
EPB41-211ENST00000488277 FAM19A2Q8N3H0 131 aa0.7□□□□□ -2.3
EPB41-211ENST00000488277 CLEC2BQ92478 149 aa0.7□□□□□ -2.3
EPB41-211ENST00000488277 MCEEQ96PE7 176 aa0.7□□□□□ -2.3
EPB41-211ENST00000488277 OR4C12Q96R67 309 aa0.7□□□□□ -2.3
EPB41-211ENST00000488277 GINS2Q9Y248 185 aa0.7□□□□□ -2.3
EPB41-211ENST00000488277 KIAA1107Q9UPP5 1409 aa0.7□□□□□ -2.3
EPB41-211ENST00000488277 HEATR1Q9H583 2144 aaKnown RBP0.7□□□□□ -2.3
EPB41-211ENST00000488277 MYLKQ15746 1914 aa0.7□□□□□ -2.3
EPB41-211ENST00000488277 ANKRD31Q8N7Z5 1873 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 NUP210Q8TEM1 1887 aaPredicted RBP0.69□□□□□ -2.3
EPB41-211ENST00000488277 TCOF1Q13428 1488 aaKnown RBP0.69□□□□□ -2.3
EPB41-211ENST00000488277 CECR2Q9BXF3 1484 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 TRAV13-1A0A0B4J241 112 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 LOC107984640A0A0U1RRK4 108 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 J3KT08 172 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 M0QZK8 103 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 NUPR1O60356 82 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 PPYP01298 95 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 TPT1P13693 172 aaKnown RBP0.69□□□□□ -2.3
EPB41-211ENST00000488277 COX7CP15954 63 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 MAXP61244 160 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 MRPS36P82909 103 aaKnown RBP0.69□□□□□ -2.3
EPB41-211ENST00000488277 DIAPH2-AS1Q14236 149 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 KRTAP26-1Q6PEX3 210 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 OR5AK2Q8NH90 309 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 BRK1Q8WUW1 75 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 DIRC1Q969H9 104 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 FKBP11Q9NYL4 201 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 HSPB11Q9Y547 144 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 BCL9O00512 1426 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 COL24A1Q17RW2 1714 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 TECTAO75443 2155 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 DLC1Q96QB1 1528 aa0.69□□□□□ -2.3
EPB41-211ENST00000488277 COL6A6A6NMZ7 2263 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 TRBV27A0A0K0K1C4 114 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 C3orf85A0A1B0GTC6 90 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 H3BMG7 143 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 ADGRB2O60241 1585 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 TRACP01848 142 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 NBEAP1P0C6P0 100 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 CRYGSP22914 178 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 PSG9Q00887 426 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 MIR22HGQ0VDD5 57 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 HAGHLQ6PII5 290 aaPredicted RBP0.68□□□□□ -2.3
EPB41-211ENST00000488277 ZCCHC23Q6ZST2 131 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 CCL4L1Q8NHW4 92 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 ANP32BQ92688 251 aaKnown RBP0.68□□□□□ -2.3
EPB41-211ENST00000488277 LINC00526Q96FQ7 95 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 CST11Q9H112 138 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 PLXNA4Q9HCM2 1894 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 CBLN4Q9NTU7 201 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 TNFSF18Q9UNG2 199 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 MCM3APO60318 1980 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 RFX7Q2KHR2 1363 aa0.68□□□□□ -2.3
EPB41-211ENST00000488277 FLG2Q5D862 2391 aaPredicted RBP0.68□□□□□ -2.3
EPB41-211ENST00000488277 A2MP01023 1474 aa0.67□□□□□ -2.3
EPB41-211ENST00000488277 TNRC6AQ8NDV7 1962 aaKnown RBP0.67□□□□□ -2.3
EPB41-211ENST00000488277 TRAV23DV6A0A075B6W5 121 aa0.67□□□□□ -2.3
EPB41-211ENST00000488277 TRBV7-6A0A0J9YX20 115 aa0.67□□□□□ -2.3
EPB41-211ENST00000488277 ARL5CA6NH57 179 aa0.67□□□□□ -2.3
EPB41-211ENST00000488277 JMJD7-PLA2G4BH0Y9G9 81 aa0.67□□□□□ -2.3
EPB41-211ENST00000488277 OR8B8Q15620 311 aa0.67□□□□□ -2.3
EPB41-211ENST00000488277 DEFB115Q30KQ5 88 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms