RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 IFNA14P01570 189 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 HIST1H2BJP06899 126 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 MRPS25P82663 173 aaKnown RBP0.11□□□□□ -2.39
CCDC66-221ENST00000487739 SCGB2B2Q4G0G5 96 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 AKR1C8PQ5T2L2 129 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 FOXI2Q6ZQN5 318 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 ZCCHC23Q6ZST2 131 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 PLAC4Q8WY50 150 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 CCL19Q99731 98 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 SSR3Q9UNL2 185 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 ANK1P16157 1881 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 NAV2Q8IVL1 2488 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 ADGBQ8N7X0 1667 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 CTTNBP2Q8WZ74 1663 aa0.11□□□□□ -2.39
CCDC66-221ENST00000487739 CACNA1EQ15878 2313 aa0.1□□□□□ -2.39
CCDC66-221ENST00000487739 TRPM7Q96QT4 1865 aa0.1□□□□□ -2.39
CCDC66-221ENST00000487739 LYRM1O43325 122 aa0.1□□□□□ -2.39
CCDC66-221ENST00000487739 PIAS1O75925 651 aa0.1□□□□□ -2.39
CCDC66-221ENST00000487739 APOA2P02652 100 aa0.1□□□□□ -2.39
CCDC66-221ENST00000487739 CCL4P13236 92 aa0.1□□□□□ -2.39
CCDC66-221ENST00000487739 RPL37AP61513 92 aaKnown RBP0.1□□□□□ -2.39
CCDC66-221ENST00000487739 C1orf140Q5VVS0 124 aa0.1□□□□□ -2.39
CCDC66-221ENST00000487739 CHMP6Q96FZ7 201 aa0.1□□□□□ -2.39
CCDC66-221ENST00000487739 PBDC1Q9BVG4 233 aa0.1□□□□□ -2.39
CCDC66-221ENST00000487739 LYRM2Q9NU23 88 aaPredicted RBP0.1□□□□□ -2.39
CCDC66-221ENST00000487739 JPT1Q9UK76 154 aa0.1□□□□□ -2.39
CCDC66-221ENST00000487739 RNF11Q9Y3C5 154 aa0.1□□□□□ -2.39
CCDC66-221ENST00000487739 ATG2AQ2TAZ0 1938 aa0.09□□□□□ -2.39
CCDC66-221ENST00000487739 KIAA1549LQ6ZVL6 1849 aa0.09□□□□□ -2.39
CCDC66-221ENST00000487739 MFSD11O43934 449 aa0.09□□□□□ -2.4
CCDC66-221ENST00000487739 ATP5HO75947 161 aa0.09□□□□□ -2.4
CCDC66-221ENST00000487739 IGHV3-33P01772 117 aa0.09□□□□□ -2.4
CCDC66-221ENST00000487739 CSN2P05814 226 aa0.09□□□□□ -2.4
CCDC66-221ENST00000487739 PPP1R2P41236 205 aa0.09□□□□□ -2.4
CCDC66-221ENST00000487739 HBBP68871 147 aa0.09□□□□□ -2.4
CCDC66-221ENST00000487739 DIAPH2-AS1Q14236 149 aa0.09□□□□□ -2.4
CCDC66-221ENST00000487739 VMA21Q3ZAQ7 101 aa0.09□□□□□ -2.4
CCDC66-221ENST00000487739 FAM216BQ8N7L0 139 aa0.09□□□□□ -2.4
CCDC66-221ENST00000487739 GINS3Q9BRX5 216 aa0.09□□□□□ -2.4
CCDC66-221ENST00000487739 SH3BGRL3Q9H299 93 aa0.09□□□□□ -2.4
CCDC66-221ENST00000487739 BOKQ9UMX3 212 aaPredicted RBP0.09□□□□□ -2.4
CCDC66-221ENST00000487739 NUP210Q8TEM1 1887 aaPredicted RBP0.09□□□□□ -2.4
CCDC66-221ENST00000487739 GPR98Q8WXG9 6306 aa0.09□□□□□ -2.4
CCDC66-221ENST00000487739 TANC2Q9HCD6 1990 aa0.08□□□□□ -2.4
CCDC66-221ENST00000487739 TRAV5A0A0B4J249 113 aa0.08□□□□□ -2.4
CCDC66-221ENST00000487739 FKBP1CQ5VVH2 108 aa0.08□□□□□ -2.4
CCDC66-221ENST00000487739 LINC00299Q6ZSB3 139 aa0.08□□□□□ -2.4
CCDC66-221ENST00000487739 LINC00269Q8N2A0 174 aa0.08□□□□□ -2.4
CCDC66-221ENST00000487739 OR13C6PQ8NH95 151 aa0.08□□□□□ -2.4
CCDC66-221ENST00000487739 RMND5BQ96G75 393 aaPredicted RBP0.08□□□□□ -2.4
CCDC66-221ENST00000487739 CST11Q9H112 138 aa0.08□□□□□ -2.4
CCDC66-221ENST00000487739 USP54Q70EL1 1684 aa0.08□□□□□ -2.4
CCDC66-221ENST00000487739 MEGF8Q7Z7M0 2845 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 GPR31O00270 319 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 LY6G6CO95867 125 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 IFNA1P01562 189 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 MT-ND6P03923 174 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 PDE6GP18545 87 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 RPL35P42766 123 aaKnown RBP0.07□□□□□ -2.4
CCDC66-221ENST00000487739 FXYD6P3P58550 94 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 QRFPP83859 136 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 NEDD8Q15843 81 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 PHF5AQ7RTV0 110 aaKnown RBP0.07□□□□□ -2.4
CCDC66-221ENST00000487739 SMIM20Q8N5G0 67 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 MALSU1Q96EH3 234 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 CARD19Q96LW7 228 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 TAF9BQ9HBM6 251 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 NAT8BQ9UHF3 227 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 MAST4O15021 2626 aa0.07□□□□□ -2.4
CCDC66-221ENST00000487739 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.07□□□□□ -2.4
CCDC66-221ENST00000487739 A0A0J9YY99 117 aa0.06□□□□□ -2.4
CCDC66-221ENST00000487739 CST7O76096 145 aa0.06□□□□□ -2.4
CCDC66-221ENST00000487739 ARF6P62330 175 aa0.06□□□□□ -2.4
CCDC66-221ENST00000487739 GNG3P63215 75 aa0.06□□□□□ -2.4
CCDC66-221ENST00000487739 POU6F1Q14863 301 aa0.06□□□□□ -2.4
CCDC66-221ENST00000487739 LTC4SQ16873 150 aa0.06□□□□□ -2.4
CCDC66-221ENST00000487739 CASC2Q6XLA1 102 aa0.06□□□□□ -2.4
CCDC66-221ENST00000487739 OR2H1Q9GZK4 316 aa0.06□□□□□ -2.4
CCDC66-221ENST00000487739 LPAR5Q9H1C0 372 aa0.06□□□□□ -2.4
CCDC66-221ENST00000487739 TPRKBQ9Y3C4 175 aa0.06□□□□□ -2.4
CCDC66-221ENST00000487739 SYNE1Q8NF91 8797 aaKnown RBP0.06□□□□□ -2.4
CCDC66-221ENST00000487739 RTL9Q8NET4 1388 aa0.06□□□□□ -2.4
CCDC66-221ENST00000487739 GLRXP35754 106 aa0.05□□□□□ -2.4
CCDC66-221ENST00000487739 TAS2R41P59536 307 aa0.05□□□□□ -2.4
CCDC66-221ENST00000487739 RPL19P84098 196 aaKnown RBP0.05□□□□□ -2.4
CCDC66-221ENST00000487739 RTL8BQ17RB0 113 aa0.05□□□□□ -2.4
CCDC66-221ENST00000487739 NUP35Q8NFH5 326 aa0.05□□□□□ -2.4
CCDC66-221ENST00000487739 BORCS8Q96FH0 119 aa0.05□□□□□ -2.4
CCDC66-221ENST00000487739 OR4C12Q96R67 309 aa0.05□□□□□ -2.4
CCDC66-221ENST00000487739 EFCAB11Q9BUY7 163 aa0.05□□□□□ -2.4
CCDC66-221ENST00000487739 RTL8AQ9BWD3 113 aa0.05□□□□□ -2.4
CCDC66-221ENST00000487739 OTORQ9NRC9 128 aa0.05□□□□□ -2.4
CCDC66-221ENST00000487739 AFDNP55196 1824 aaKnown RBP0.05□□□□□ -2.4
CCDC66-221ENST00000487739 KNTC1P50748 2209 aa0.05□□□□□ -2.4
CCDC66-221ENST00000487739 RBBP6Q7Z6E9 1792 aaKnown RBP0.04□□□□□ -2.4
CCDC66-221ENST00000487739 MRPS15P82914 257 aaKnown RBP0.04□□□□□ -2.4
CCDC66-221ENST00000487739 SPINK6Q6UWN8 80 aa0.04□□□□□ -2.4
CCDC66-221ENST00000487739 CROCCP2Q86T23 111 aa0.04□□□□□ -2.4
CCDC66-221ENST00000487739 ANGPTL5Q86XS5 388 aa0.04□□□□□ -2.4
CCDC66-221ENST00000487739 PRR15Q8IV56 129 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 260.5 ms