RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 VWC2Q2TAL6 325 aa16.64■□□□□ 0.25
PLOD3-215ENST00000487563 ZNF493Q6ZR52 646 aa16.64■□□□□ 0.25
PLOD3-215ENST00000487563 TMEM252Q8N6L7 170 aa16.64■□□□□ 0.25
PLOD3-215ENST00000487563 C20orf144Q9BQM9 153 aa16.64■□□□□ 0.25
PLOD3-215ENST00000487563 PARD6GQ9BYG4 376 aaPredicted RBP16.64■□□□□ 0.25
PLOD3-215ENST00000487563 SLC39A9Q9NUM3 307 aa16.64■□□□□ 0.25
PLOD3-215ENST00000487563 TIMM8BQ9Y5J9 83 aaPredicted RBP16.64■□□□□ 0.25
PLOD3-215ENST00000487563 PRAC2D3DTV9 90 aa16.63■□□□□ 0.25
PLOD3-215ENST00000487563 RTL8CO15255 209 aa16.63■□□□□ 0.25
PLOD3-215ENST00000487563 FGF7P21781 194 aa16.63■□□□□ 0.25
PLOD3-215ENST00000487563 RPL29P47914 159 aaKnown RBP16.63■□□□□ 0.25
PLOD3-215ENST00000487563 TMEM263Q8WUH6 116 aaKnown RBP16.63■□□□□ 0.25
PLOD3-215ENST00000487563 S100ZQ8WXG8 99 aa16.63■□□□□ 0.25
PLOD3-215ENST00000487563 GPN1Q9HCN4 374 aaPredicted RBP16.63■□□□□ 0.25
PLOD3-215ENST00000487563 CBY3A6NI87 242 aa16.62■□□□□ 0.25
PLOD3-215ENST00000487563 SOHLH1Q5JUK2 328 aa16.62■□□□□ 0.25
PLOD3-215ENST00000487563 CCDC28AQ8IWP9 274 aa16.62■□□□□ 0.25
PLOD3-215ENST00000487563 SAT2Q96F10 170 aaPredicted RBP16.62■□□□□ 0.25
PLOD3-215ENST00000487563 DNAH2Q9P225 4427 aa16.62■□□□□ 0.25
PLOD3-215ENST00000487563 FAT2Q9NYQ8 4349 aa16.61■□□□□ 0.25
PLOD3-215ENST00000487563 J3KRW8 73 aa16.61■□□□□ 0.25
PLOD3-215ENST00000487563 NUDT3O95989 172 aa16.61■□□□□ 0.25
PLOD3-215ENST00000487563 ATP6V1FQ16864 119 aa16.61■□□□□ 0.25
PLOD3-215ENST00000487563 GFI1BQ5VTD9 330 aa16.61■□□□□ 0.25
PLOD3-215ENST00000487563 LINC00299Q6ZSB3 139 aa16.61■□□□□ 0.25
PLOD3-215ENST00000487563 RNASE8Q8TDE3 154 aaKnown RBP16.61■□□□□ 0.25
PLOD3-215ENST00000487563 NOP10Q9NPE3 64 aaKnown RBP16.61■□□□□ 0.25
PLOD3-215ENST00000487563 HERC2O95714 4834 aa16.6■□□□□ 0.25
PLOD3-215ENST00000487563 LEPP41159 167 aa16.6■□□□□ 0.25
PLOD3-215ENST00000487563 FAM3BP58499 235 aaPredicted RBP16.6■□□□□ 0.25
PLOD3-215ENST00000487563 IL15RAQ13261 267 aa16.6■□□□□ 0.25
PLOD3-215ENST00000487563 ASAH1Q13510 395 aa16.6■□□□□ 0.25
PLOD3-215ENST00000487563 KIR3DS1Q14943 382 aa16.6■□□□□ 0.25
PLOD3-215ENST00000487563 Q6ZR54 194 aa16.6■□□□□ 0.25
PLOD3-215ENST00000487563 ENKURQ8TC29 256 aa16.6■□□□□ 0.25
PLOD3-215ENST00000487563 A0A1B0GVY2 172 aa16.59■□□□□ 0.25
PLOD3-215ENST00000487563 ZNF586Q9NXT0 402 aa16.59■□□□□ 0.25
PLOD3-215ENST00000487563 ZNF253O75346 499 aa16.58■□□□□ 0.24
PLOD3-215ENST00000487563 MPDU1O75352 247 aa16.58■□□□□ 0.24
PLOD3-215ENST00000487563 ODF3Q96PU9 254 aa16.58■□□□□ 0.24
PLOD3-215ENST00000487563 DNAH17Q9UFH2 4485 aa16.58■□□□□ 0.24
PLOD3-215ENST00000487563 NACAE9PAV3 2078 aa16.57■□□□□ 0.24
PLOD3-215ENST00000487563 NPIPB6E9PJ23 425 aa16.57■□□□□ 0.24
PLOD3-215ENST00000487563 CHAC2Q8WUX2 184 aa16.57■□□□□ 0.24
PLOD3-215ENST00000487563 TIMM9Q9Y5J7 89 aa16.57■□□□□ 0.24
PLOD3-215ENST00000487563 TRAV12-3A0A0B4J271 114 aa16.56■□□□□ 0.24
PLOD3-215ENST00000487563 SNURFLB1AK76 121 aa16.56■□□□□ 0.24
PLOD3-215ENST00000487563 RLN2P04090 185 aa16.56■□□□□ 0.24
PLOD3-215ENST00000487563 CT45A10P0DMU9 189 aa16.56■□□□□ 0.24
PLOD3-215ENST00000487563 C1orf134Q5TEV5 83 aa16.56■□□□□ 0.24
PLOD3-215ENST00000487563 MRPL53Q96EL3 112 aaKnown RBP16.56■□□□□ 0.24
PLOD3-215ENST00000487563 TMEM14CQ9P0S9 112 aa16.56■□□□□ 0.24
PLOD3-215ENST00000487563 TRBV19A0A075B6N1 114 aa16.55■□□□□ 0.24
PLOD3-215ENST00000487563 HIST1H1EP10412 219 aaKnown RBP16.55■□□□□ 0.24
PLOD3-215ENST00000487563 CCL18P55774 89 aa16.55■□□□□ 0.24
PLOD3-215ENST00000487563 NPCDR1Q9BY65 106 aa16.55■□□□□ 0.24
PLOD3-215ENST00000487563 SLC25A31Q9H0C2 315 aa16.55■□□□□ 0.24
PLOD3-215ENST00000487563 M0R3E3 92 aa16.54■□□□□ 0.24
PLOD3-215ENST00000487563 SIX6O95475 246 aa16.54■□□□□ 0.24
PLOD3-215ENST00000487563 CLINT1Q14677 625 aa16.54■□□□□ 0.24
PLOD3-215ENST00000487563 LRRC37A5PQ49AS3 106 aa16.54■□□□□ 0.24
PLOD3-215ENST00000487563 OR5C1Q8NGR4 320 aa16.54■□□□□ 0.24
PLOD3-215ENST00000487563 THAP6Q8TBB0 222 aa16.54■□□□□ 0.24
PLOD3-215ENST00000487563 BLNKQ8WV28 456 aa16.54■□□□□ 0.24
PLOD3-215ENST00000487563 RNF141Q8WVD5 230 aa16.54■□□□□ 0.24
PLOD3-215ENST00000487563 PRELID1Q9Y255 219 aa16.54■□□□□ 0.24
PLOD3-215ENST00000487563 E5RGE8 158 aa16.53■□□□□ 0.24
PLOD3-215ENST00000487563 UPK1BO75841 260 aa16.53■□□□□ 0.24
PLOD3-215ENST00000487563 PYYP10082 97 aa16.53■□□□□ 0.24
PLOD3-215ENST00000487563 NHLH2Q02577 135 aa16.53■□□□□ 0.24
PLOD3-215ENST00000487563 OR5I1Q13606 314 aa16.53■□□□□ 0.24
PLOD3-215ENST00000487563 PDE6HQ13956 83 aa16.53■□□□□ 0.24
PLOD3-215ENST00000487563 PYGO2Q9BRQ0 406 aa16.53■□□□□ 0.24
PLOD3-215ENST00000487563 AAMDCQ9H7C9 122 aa16.53■□□□□ 0.24
PLOD3-215ENST00000487563 GAGE12BA1L429 117 aa16.52■□□□□ 0.24
PLOD3-215ENST00000487563 GAGE7O76087 117 aa16.52■□□□□ 0.24
PLOD3-215ENST00000487563 GAGE12FP0CL80 117 aa16.52■□□□□ 0.24
PLOD3-215ENST00000487563 GAGE12GP0CL81 117 aa16.52■□□□□ 0.24
PLOD3-215ENST00000487563 GAGE12IP0CL82 117 aa16.52■□□□□ 0.24
PLOD3-215ENST00000487563 GCSAMLQ5JQS6 135 aa16.52■□□□□ 0.24
PLOD3-215ENST00000487563 SLC25A5P05141 298 aaKnown RBP16.51■□□□□ 0.23
PLOD3-215ENST00000487563 ERCC8Q13216 396 aa16.51■□□□□ 0.23
PLOD3-215ENST00000487563 GNPNAT1Q96EK6 184 aaPredicted RBP16.51■□□□□ 0.23
PLOD3-215ENST00000487563 NMES1Q9C002 83 aa16.51■□□□□ 0.23
PLOD3-215ENST00000487563 KCNIP2Q9NS61 270 aa16.51■□□□□ 0.23
PLOD3-215ENST00000487563 C7orf71A4D174 169 aa16.5■□□□□ 0.23
PLOD3-215ENST00000487563 PRAF2O60831 178 aa16.5■□□□□ 0.23
PLOD3-215ENST00000487563 NDUFB4O95168 129 aa16.5■□□□□ 0.23
PLOD3-215ENST00000487563 EXOC3-AS1Q8N2X6 119 aa16.5■□□□□ 0.23
PLOD3-215ENST00000487563 OR5AC2Q9NZP5 309 aa16.5■□□□□ 0.23
PLOD3-215ENST00000487563 PKHD1P08F94 4074 aa16.5■□□□□ 0.23
PLOD3-215ENST00000487563 TRAV26-1A0A087WT03 109 aa16.49■□□□□ 0.23
PLOD3-215ENST00000487563 M6PRP20645 277 aa16.49■□□□□ 0.23
PLOD3-215ENST00000487563 CYCSP99999 105 aaKnown RBP16.49■□□□□ 0.23
PLOD3-215ENST00000487563 LINC00612Q8N6U2 182 aa16.49■□□□□ 0.23
PLOD3-215ENST00000487563 ZNRF2Q8NHG8 242 aa16.49■□□□□ 0.23
PLOD3-215ENST00000487563 LINC00477Q96M19 166 aa16.49■□□□□ 0.23
PLOD3-215ENST00000487563 SLC25A2Q9BXI2 301 aa16.49■□□□□ 0.23
PLOD3-215ENST00000487563 KIAA1109Q2LD37 5005 aa16.48■□□□□ 0.23
PLOD3-215ENST00000487563 NBDYA0A0U1RRE5 68 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms