RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 CXorf1O96002 111 aa7.87□□□□□ -1.15
TOP3B-216ENST00000487485 ARL14EPLP0DKL9 152 aa7.87□□□□□ -1.15
TOP3B-216ENST00000487485 RPL35AP18077 110 aaKnown RBP7.87□□□□□ -1.15
TOP3B-216ENST00000487485 UBE2L3P68036 154 aaKnown RBP7.87□□□□□ -1.15
TOP3B-216ENST00000487485 PSG9Q00887 426 aa7.87□□□□□ -1.15
TOP3B-216ENST00000487485 GDF5OSQ5U4N7 250 aa7.87□□□□□ -1.15
TOP3B-216ENST00000487485 EIF5AL1Q6IS14 154 aaKnown RBP7.87□□□□□ -1.15
TOP3B-216ENST00000487485 EBLN2Q6P2I7 272 aa7.87□□□□□ -1.15
TOP3B-216ENST00000487485 FOXI2Q6ZQN5 318 aa7.87□□□□□ -1.15
TOP3B-216ENST00000487485 ZNF738Q8NE65 137 aa7.87□□□□□ -1.15
TOP3B-216ENST00000487485 SAV1Q9H4B6 383 aaPredicted RBP7.87□□□□□ -1.15
TOP3B-216ENST00000487485 CLEC5AQ9NY25 188 aa7.87□□□□□ -1.15
TOP3B-216ENST00000487485 BOLA1Q9Y3E2 137 aa7.87□□□□□ -1.15
TOP3B-216ENST00000487485 ZNF705FA8MVS1 300 aaPredicted RBP7.86□□□□□ -1.15
TOP3B-216ENST00000487485 F6UB75 175 aa7.86□□□□□ -1.15
TOP3B-216ENST00000487485 FHITP49789 147 aa7.86□□□□□ -1.15
TOP3B-216ENST00000487485 RANP62826 216 aaKnown RBP7.86□□□□□ -1.15
TOP3B-216ENST00000487485 HAGHQ16775 308 aa7.86□□□□□ -1.15
TOP3B-216ENST00000487485 TRPT1Q86TN4 253 aaKnown RBP7.86□□□□□ -1.15
TOP3B-216ENST00000487485 EXOC3-AS1Q8N2X6 119 aa7.86□□□□□ -1.15
TOP3B-216ENST00000487485 FAM213BQ8TBF2 198 aa7.86□□□□□ -1.15
TOP3B-216ENST00000487485 PHYHIPLQ96FC7 376 aa7.86□□□□□ -1.15
TOP3B-216ENST00000487485 HERC2O95714 4834 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 A0A0J9YX75 114 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 H3BMM0 161 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 BOLA2-SMG1P6H3BVE0 249 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 ZNF705DP0CH99 300 aaPredicted RBP7.85□□□□□ -1.15
TOP3B-216ENST00000487485 ZNF705BP0CI00 300 aaPredicted RBP7.85□□□□□ -1.15
TOP3B-216ENST00000487485 PRB4P10163 310 aaPredicted RBP7.85□□□□□ -1.15
TOP3B-216ENST00000487485 HLA-DRB4P13762 266 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 GCHFRP30047 84 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 APOC4P55056 127 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 FGF8P55075 233 aaPredicted RBP7.85□□□□□ -1.15
TOP3B-216ENST00000487485 ICAM4Q14773 271 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 DPPA3Q6W0C5 159 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 IQCF2Q8IXL9 164 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 LYPD1Q8N2G4 141 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 OR4B1Q8NGF8 309 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 SUN5Q8TC36 379 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 RPUSD4Q96CM3 377 aaKnown RBP7.85□□□□□ -1.15
TOP3B-216ENST00000487485 AAMDCQ9H7C9 122 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 ZMAT4Q9H898 229 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 PRELID1Q9Y255 219 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 HLA-DRB4X5D2U9 266 aa7.85□□□□□ -1.15
TOP3B-216ENST00000487485 MAP1LC3B2A6NCE7 125 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 M0R3E3 92 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 DUSP14O95147 198 aaKnown RBP7.84□□□□□ -1.15
TOP3B-216ENST00000487485 IGKV3-20P01619 116 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 SULT1A2P50226 295 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 RAB5CP51148 216 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 OR8A1Q8NGG7 326 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 SFT2D1Q8WV19 159 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 MAP1LC3BQ9GZQ8 125 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 CSTL1Q9H114 145 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 Q9H3A6 140 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 TMPRSS5Q9H3S3 457 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 EDA2RQ9HAV5 297 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 TMEM167BQ9NRX6 74 aa7.84□□□□□ -1.15
TOP3B-216ENST00000487485 RYR1P21817 5038 aa7.83□□□□□ -1.16
TOP3B-216ENST00000487485 KIR2DL5BA0A0G2JN68 375 aa7.83□□□□□ -1.16
TOP3B-216ENST00000487485 KIR2DL5BA0A0G2JPC4 375 aa7.83□□□□□ -1.16
TOP3B-216ENST00000487485 PGPA6NDG6 321 aa7.83□□□□□ -1.16
TOP3B-216ENST00000487485 PRAC2D3DTV9 90 aa7.83□□□□□ -1.16
TOP3B-216ENST00000487485 H2AFB1P0C5Y9 115 aa7.83□□□□□ -1.16
TOP3B-216ENST00000487485 CNN1P51911 297 aaKnown RBP7.83□□□□□ -1.16
TOP3B-216ENST00000487485 HIST1H1AQ02539 215 aaPredicted RBP7.83□□□□□ -1.16
TOP3B-216ENST00000487485 FAM74A1Q5RGS3 127 aa7.83□□□□□ -1.16
TOP3B-216ENST00000487485 KIR2DL5AQ8N109 375 aa7.83□□□□□ -1.16
TOP3B-216ENST00000487485 KIR2DL5BQ8NHK3 375 aa7.83□□□□□ -1.16
TOP3B-216ENST00000487485 MBD3L1Q8WWY6 194 aa7.83□□□□□ -1.16
TOP3B-216ENST00000487485 MRPL53Q96EL3 112 aaKnown RBP7.83□□□□□ -1.16
TOP3B-216ENST00000487485 ALMS1Q8TCU4 4167 aa7.83□□□□□ -1.16
TOP3B-216ENST00000487485 PCLOQ9Y6V0 5065 aa7.83□□□□□ -1.16
TOP3B-216ENST00000487485 UBE2CO00762 179 aa7.82□□□□□ -1.16
TOP3B-216ENST00000487485 NUTF2P61970 127 aaKnown RBP7.82□□□□□ -1.16
TOP3B-216ENST00000487485 MORN3Q6PF18 240 aaPredicted RBP7.82□□□□□ -1.16
TOP3B-216ENST00000487485 ALKAL2Q6UX46 152 aa7.82□□□□□ -1.16
TOP3B-216ENST00000487485 CLUHP3Q96NS8 147 aa7.82□□□□□ -1.16
TOP3B-216ENST00000487485 TM2D3Q9BRN9 247 aa7.82□□□□□ -1.16
TOP3B-216ENST00000487485 FRAS1Q86XX4 4008 aa7.81□□□□□ -1.16
TOP3B-216ENST00000487485 A0A1B0GV50 99 aa7.81□□□□□ -1.16
TOP3B-216ENST00000487485 CA1P00915 261 aaPredicted RBP7.81□□□□□ -1.16
TOP3B-216ENST00000487485 CSN1S1P47710 185 aa7.81□□□□□ -1.16
TOP3B-216ENST00000487485 FXYD7P58549 80 aa7.81□□□□□ -1.16
TOP3B-216ENST00000487485 UBE2G2P60604 165 aa7.81□□□□□ -1.16
TOP3B-216ENST00000487485 OR10J6PQ8NGY7 276 aa7.81□□□□□ -1.16
TOP3B-216ENST00000487485 RXFP4Q8TDU9 374 aa7.81□□□□□ -1.16
TOP3B-216ENST00000487485 OTORQ9NRC9 128 aa7.81□□□□□ -1.16
TOP3B-216ENST00000487485 A0A1W2PRE2 83 aa7.8□□□□□ -1.16
TOP3B-216ENST00000487485 A8MTW9 85 aa7.8□□□□□ -1.16
TOP3B-216ENST00000487485 ZNF705EA8MWA4 302 aaPredicted RBP7.8□□□□□ -1.16
TOP3B-216ENST00000487485 DIRC3C9JPN6 131 aa7.8□□□□□ -1.16
TOP3B-216ENST00000487485 SLC25A5P05141 298 aaKnown RBP7.8□□□□□ -1.16
TOP3B-216ENST00000487485 GIG44P09565 113 aaPredicted RBP7.8□□□□□ -1.16
TOP3B-216ENST00000487485 SUMO1P63165 101 aaKnown RBP7.8□□□□□ -1.16
TOP3B-216ENST00000487485 ERCC8Q13216 396 aa7.8□□□□□ -1.16
TOP3B-216ENST00000487485 AMTNQ6UX39 209 aa7.8□□□□□ -1.16
TOP3B-216ENST00000487485 Q6ZWC4 215 aa7.8□□□□□ -1.16
TOP3B-216ENST00000487485 CMTM2Q8TAZ6 248 aa7.8□□□□□ -1.16
TOP3B-216ENST00000487485 SPATA25Q9BR10 227 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms