RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 NOP10Q9NPE3 64 aaKnown RBP8.54□□□□□ -1.04
VPS16-208ENST00000487461 RNF24Q9Y225 148 aa8.54□□□□□ -1.04
VPS16-208ENST00000487461 TIMM8BQ9Y5J9 83 aaPredicted RBP8.54□□□□□ -1.04
VPS16-208ENST00000487461 INMT-MINDY4F8WBC2 141 aa8.53□□□□□ -1.04
VPS16-208ENST00000487461 SLC17A3O00476 420 aa8.53□□□□□ -1.04
VPS16-208ENST00000487461 CCSO14618 274 aa8.53□□□□□ -1.04
VPS16-208ENST00000487461 IFITM2Q01629 132 aa8.53□□□□□ -1.04
VPS16-208ENST00000487461 OPCMLQ14982 345 aa8.53□□□□□ -1.04
VPS16-208ENST00000487461 LCN15Q6UWW0 184 aa8.53□□□□□ -1.04
VPS16-208ENST00000487461 RNASE8Q8TDE3 154 aaKnown RBP8.53□□□□□ -1.04
VPS16-208ENST00000487461 C16orf74Q96GX8 76 aa8.53□□□□□ -1.04
VPS16-208ENST00000487461 PARD6GQ9BYG4 376 aaPredicted RBP8.53□□□□□ -1.04
VPS16-208ENST00000487461 NBDYA0A0U1RRE5 68 aa8.52□□□□□ -1.05
VPS16-208ENST00000487461 H3BQ15 152 aa8.52□□□□□ -1.05
VPS16-208ENST00000487461 H7BYZ3 331 aa8.52□□□□□ -1.05
VPS16-208ENST00000487461 COX7A2P2O60397 106 aa8.52□□□□□ -1.05
VPS16-208ENST00000487461 TNP2Q05952 138 aa8.52□□□□□ -1.05
VPS16-208ENST00000487461 C10orf113Q5VZT2 155 aa8.52□□□□□ -1.05
VPS16-208ENST00000487461 ZNF493Q6ZR52 646 aa8.52□□□□□ -1.05
VPS16-208ENST00000487461 BPIFA4PQ86YQ2 179 aa8.52□□□□□ -1.05
VPS16-208ENST00000487461 RNF141Q8WVD5 230 aa8.52□□□□□ -1.05
VPS16-208ENST00000487461 SAT2Q96F10 170 aaPredicted RBP8.52□□□□□ -1.05
VPS16-208ENST00000487461 SLC50A1Q9BRV3 221 aa8.52□□□□□ -1.05
VPS16-208ENST00000487461 DNAJC4Q9NNZ3 241 aa8.52□□□□□ -1.05
VPS16-208ENST00000487461 LINC00588Q9Y4M8 146 aa8.52□□□□□ -1.05
VPS16-208ENST00000487461 TRAV5A0A0B4J249 113 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 FAM24AA6NFZ4 105 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 L7N2F9 121 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 C1QBP02746 253 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 CT45A10P0DMU9 189 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 IGLC2P0DOY2 106 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 CAMLGP49069 296 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 CCL18P55774 89 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 VAMP2P63027 116 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 OR10J6PQ8NGY7 276 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 TMEM263Q8WUH6 116 aaKnown RBP8.51□□□□□ -1.05
VPS16-208ENST00000487461 C20orf85Q9H1P6 137 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 C11orf1Q9H5F2 150 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 LSM5Q9Y4Y9 91 aaKnown RBP8.51□□□□□ -1.05
VPS16-208ENST00000487461 ALG5Q9Y673 324 aa8.51□□□□□ -1.05
VPS16-208ENST00000487461 FAM25EA8MYX2 175 aa8.5□□□□□ -1.05
VPS16-208ENST00000487461 CST7O76096 145 aa8.5□□□□□ -1.05
VPS16-208ENST00000487461 TCRBP04435 133 aa8.5□□□□□ -1.05
VPS16-208ENST00000487461 OR5I1Q13606 314 aa8.5□□□□□ -1.05
VPS16-208ENST00000487461 GFI1BQ5VTD9 330 aa8.5□□□□□ -1.05
VPS16-208ENST00000487461 MIC13Q5XKP0 118 aa8.5□□□□□ -1.05
VPS16-208ENST00000487461 C6orf223Q8N319 242 aa8.5□□□□□ -1.05
VPS16-208ENST00000487461 LINC00612Q8N6U2 182 aa8.5□□□□□ -1.05
VPS16-208ENST00000487461 C20orf144Q9BQM9 153 aa8.5□□□□□ -1.05
VPS16-208ENST00000487461 KRTAP4-5Q9BYR2 181 aa8.5□□□□□ -1.05
VPS16-208ENST00000487461 PXMP4Q9Y6I8 212 aa8.5□□□□□ -1.05
VPS16-208ENST00000487461 TRAV6A0A075B6T7 132 aa8.49□□□□□ -1.05
VPS16-208ENST00000487461 C5orf51A6NDU8 294 aa8.49□□□□□ -1.05
VPS16-208ENST00000487461 J3KRW8 73 aa8.49□□□□□ -1.05
VPS16-208ENST00000487461 CAV2P51636 162 aa8.49□□□□□ -1.05
VPS16-208ENST00000487461 RAB31Q13636 194 aa8.49□□□□□ -1.05
VPS16-208ENST00000487461 CLINT1Q14677 625 aa8.49□□□□□ -1.05
VPS16-208ENST00000487461 Q6ZRG5 221 aa8.49□□□□□ -1.05
VPS16-208ENST00000487461 SSX7Q7RTT5 188 aa8.49□□□□□ -1.05
VPS16-208ENST00000487461 CCDC28AQ8IWP9 274 aa8.49□□□□□ -1.05
VPS16-208ENST00000487461 ZNF431Q8TF32 576 aaPredicted RBP8.49□□□□□ -1.05
VPS16-208ENST00000487461 HYLS1Q96M11 299 aa8.49□□□□□ -1.05
VPS16-208ENST00000487461 SEC22CQ9BRL7 303 aa8.49□□□□□ -1.05
VPS16-208ENST00000487461 ZNF586Q9NXT0 402 aa8.49□□□□□ -1.05
VPS16-208ENST00000487461 TRAV26-1A0A087WT03 109 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 TRAV12-3A0A0B4J271 114 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 GAGE12BA1L429 117 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 PRAF2O60831 178 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 GAGE7O76087 117 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 GAGE12FP0CL80 117 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 GAGE12GP0CL81 117 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 GAGE12IP0CL82 117 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 HOXA5P20719 270 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 VWC2Q2TAL6 325 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 C2orf50Q96LR7 162 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 Q9H8V8 135 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 UQCC1Q9NVA1 299 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 WDR83OSQ9Y284 106 aa8.48□□□□□ -1.05
VPS16-208ENST00000487461 A0A0J9YY99 117 aa8.47□□□□□ -1.05
VPS16-208ENST00000487461 NPIPB6E9PJ23 425 aa8.47□□□□□ -1.05
VPS16-208ENST00000487461 M6PRP20645 277 aa8.47□□□□□ -1.05
VPS16-208ENST00000487461 LEPP41159 167 aa8.47□□□□□ -1.05
VPS16-208ENST00000487461 RPL29P47914 159 aaKnown RBP8.47□□□□□ -1.05
VPS16-208ENST00000487461 NKX2-5P52952 324 aaPredicted RBP8.47□□□□□ -1.05
VPS16-208ENST00000487461 ERCC8Q13216 396 aa8.47□□□□□ -1.05
VPS16-208ENST00000487461 IL15RAQ13261 267 aa8.47□□□□□ -1.05
VPS16-208ENST00000487461 GUK1Q16774 197 aa8.47□□□□□ -1.05
VPS16-208ENST00000487461 C12orf45Q8N5I9 185 aaPredicted RBP8.47□□□□□ -1.05
VPS16-208ENST00000487461 OR1L4Q8NGR5 311 aa8.47□□□□□ -1.05
VPS16-208ENST00000487461 RXFP4Q8TDU9 374 aa8.47□□□□□ -1.05
VPS16-208ENST00000487461 GNPNAT1Q96EK6 184 aaPredicted RBP8.47□□□□□ -1.05
VPS16-208ENST00000487461 ODF3Q96PU9 254 aa8.47□□□□□ -1.05
VPS16-208ENST00000487461 SLC39A9Q9NUM3 307 aa8.47□□□□□ -1.05
VPS16-208ENST00000487461 IGSF23A1L1A6 192 aa8.46□□□□□ -1.06
VPS16-208ENST00000487461 C16orf90A8MZG2 172 aa8.46□□□□□ -1.06
VPS16-208ENST00000487461 SNURFLB1AK76 121 aa8.46□□□□□ -1.06
VPS16-208ENST00000487461 RLN2P04090 185 aa8.46□□□□□ -1.06
VPS16-208ENST00000487461 H2AFB2P0C5Z0 115 aa8.46□□□□□ -1.06
VPS16-208ENST00000487461 S100A11P31949 105 aa8.46□□□□□ -1.06
VPS16-208ENST00000487461 SULT1A1P50225 295 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms