RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 IGHV3-66A0A0C4DH42 116 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 DIRC3C9JPN6 131 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 H3BS24 57 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 K7EN84 100 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 LGALS9O00182 355 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 ISLRO14498 428 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 GCGP01275 180 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 IGLV2-8P01709 118 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 APOHP02749 345 aaPredicted RBP5.39□□□□□ -1.55
SF3A3-206ENST00000487062 CTAG1AP78358 180 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 RPL19P84098 196 aaKnown RBP5.39□□□□□ -1.55
SF3A3-206ENST00000487062 ELOBQ15370 118 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 KHDC1LQ5JSQ8 128 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 IBA57Q5T440 356 aaKnown RBP5.39□□□□□ -1.55
SF3A3-206ENST00000487062 UNQ9165/PRO28630Q6UXU0 137 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 GOLT1AQ6ZVE7 132 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 FAM231DQ6ZW35 169 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 GLMPQ8WWB7 406 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 DPF1Q92782 380 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 MRPL53Q96EL3 112 aaKnown RBP5.39□□□□□ -1.55
SF3A3-206ENST00000487062 LINC00479Q96M42 142 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 SMR3AQ99954 134 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 SMPXQ9UHP9 88 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 ZFP30Q9Y2G7 519 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 URGCP-MRPS24S4R325 110 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 CSMD2Q7Z408 3487 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 MXRA5Q9NR99 2828 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 TRBV24-1A0A075B6N3 115 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 TRAV9-1A0A075B6T8 112 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 IGHV4OR15-8A0A075B7B6 117 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 A0A087WW49 117 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 C1orf196B1AJZ1 125 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 LINC01619G3V211 115 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 M0QZ24 198 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 M0R3E3 92 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 GATCO43716 136 aaKnown RBP5.38□□□□□ -1.55
SF3A3-206ENST00000487062 NDUFA7O95182 113 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 LTAP01374 205 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 PFN1P07737 140 aaKnown RBP5.38□□□□□ -1.55
SF3A3-206ENST00000487062 FOLR2P14207 255 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 RAB5AP20339 215 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 OR5I1Q13606 314 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 PSG3Q16557 428 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 SAMD13Q5VXD3 122 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 PRNTQ86SH4 94 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 Q86TA4 180 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 C1QL4Q86Z23 238 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 TMEM183AQ8IXX5 376 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 C4orf3Q8WVX3 66 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 DAZAP1Q96EP5 407 aaKnown RBP5.38□□□□□ -1.55
SF3A3-206ENST00000487062 YPEL4Q96NS1 127 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 RHPN1-AS1Q9BWJ2 59 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 IL36BQ9NZH7 164 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 PSG8Q9UQ74 426 aa5.38□□□□□ -1.55
SF3A3-206ENST00000487062 FASNP49327 2511 aaKnown RBP5.38□□□□□ -1.55
SF3A3-206ENST00000487062 HECTD1Q9ULT8 2610 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 A0A1W2PPQ1 181 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 RBAKDNA6NC62 111 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 ZNF705GA8MUZ8 300 aaPredicted RBP5.37□□□□□ -1.55
SF3A3-206ENST00000487062 A8MWP6 167 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 CHEK1O14757 476 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 TCF21O43680 179 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 HOXD3P31249 432 aaPredicted RBP5.37□□□□□ -1.55
SF3A3-206ENST00000487062 ID1P41134 155 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 RPS10P46783 165 aaKnown RBP5.37□□□□□ -1.55
SF3A3-206ENST00000487062 RAB5BP61020 215 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 FOXL1Q12952 345 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 SAPCD1Q5SSQ6 148 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 LCN12Q6JVE5 192 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 PRR27Q6MZM9 219 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 TCF24Q7RTU0 167 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 NHLRC2Q8NBF2 726 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 KLHL30-AS1Q8NEE0 82 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 OR1N2Q8NGR9 330 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 FAM210BQ96KR6 192 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 SGK494Q96LW2 274 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 NDFIP1Q9BT67 221 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 MLST8Q9BVC4 326 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 ZNF492Q9P255 531 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 PEMTQ9UBM1 199 aa5.37□□□□□ -1.55
SF3A3-206ENST00000487062 TRAV8-1A0A0A6YYK1 113 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 TGIF2-C20orf24A0A0A6YYL0 155 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 INAFM1C9JVW0 142 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 IGLV2-11P01706 119 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 P01737 135 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 S100A8P05109 93 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 CXCL1P09341 107 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 CT45A10P0DMU9 189 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 SYNJ2BPP57105 145 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 KLF5Q13887 457 aaPredicted RBP5.36□□□□□ -1.55
SF3A3-206ENST00000487062 GBGT1Q8N5D6 347 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 NUDT10Q8NFP7 164 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 OR11H1Q8NG94 326 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 OR4B1Q8NGF8 309 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 LINC01006Q8NI28 216 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 WIPF2Q8TF74 440 aaPredicted RBP5.36□□□□□ -1.55
SF3A3-206ENST00000487062 NUDT11Q96G61 164 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 PYGO2Q9BRQ0 406 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 RNASE7Q9H1E1 156 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms