RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 H2AFB2P0C5Z0 115 aa17.23■□□□□ 0.35
LIME1-206ENST00000487026 ATP5G3P48201 142 aa17.23■□□□□ 0.35
LIME1-206ENST00000487026 S100A10P60903 97 aa17.23■□□□□ 0.35
LIME1-206ENST00000487026 OR10J6PQ8NGY7 276 aa17.23■□□□□ 0.35
LIME1-206ENST00000487026 SAT2Q96F10 170 aaPredicted RBP17.23■□□□□ 0.35
LIME1-206ENST00000487026 WDR83OSQ9Y284 106 aa17.23■□□□□ 0.35
LIME1-206ENST00000487026 TIMM8BQ9Y5J9 83 aaPredicted RBP17.23■□□□□ 0.35
LIME1-206ENST00000487026 J3KRW8 73 aa17.22■□□□□ 0.35
LIME1-206ENST00000487026 PXMP4Q9Y6I8 212 aa17.22■□□□□ 0.35
LIME1-206ENST00000487026 IGSF23A1L1A6 192 aa17.21■□□□□ 0.35
LIME1-206ENST00000487026 H7BYZ3 331 aa17.21■□□□□ 0.35
LIME1-206ENST00000487026 PVALBP20472 110 aaPredicted RBP17.21■□□□□ 0.35
LIME1-206ENST00000487026 RAB32Q13637 225 aa17.21■□□□□ 0.35
LIME1-206ENST00000487026 GFI1BQ5VTD9 330 aa17.21■□□□□ 0.35
LIME1-206ENST00000487026 RNASE8Q8TDE3 154 aaKnown RBP17.21■□□□□ 0.35
LIME1-206ENST00000487026 UBE2L5PA0A1B0GUS4 154 aa17.2■□□□□ 0.34
LIME1-206ENST00000487026 SULT1A1P50225 295 aa17.2■□□□□ 0.34
LIME1-206ENST00000487026 BAXQ07812 192 aa17.2■□□□□ 0.34
LIME1-206ENST00000487026 IL15RAQ13261 267 aa17.2■□□□□ 0.34
LIME1-206ENST00000487026 VWC2Q2TAL6 325 aa17.2■□□□□ 0.34
LIME1-206ENST00000487026 C1orf134Q5TEV5 83 aa17.2■□□□□ 0.34
LIME1-206ENST00000487026 ZNF493Q6ZR52 646 aa17.2■□□□□ 0.34
LIME1-206ENST00000487026 OR1L4Q8NGR5 311 aa17.2■□□□□ 0.34
LIME1-206ENST00000487026 TMEM263Q8WUH6 116 aaKnown RBP17.2■□□□□ 0.34
LIME1-206ENST00000487026 LYRM2Q9NU23 88 aaPredicted RBP17.2■□□□□ 0.34
LIME1-206ENST00000487026 ZNF586Q9NXT0 402 aa17.2■□□□□ 0.34
LIME1-206ENST00000487026 FAM240BA0A1B0GVZ2 78 aa17.19■□□□□ 0.34
LIME1-206ENST00000487026 CT45A10P0DMU9 189 aa17.19■□□□□ 0.34
LIME1-206ENST00000487026 TMEM252Q8N6L7 170 aa17.19■□□□□ 0.34
LIME1-206ENST00000487026 SLC39A9Q9NUM3 307 aa17.19■□□□□ 0.34
LIME1-206ENST00000487026 S100A11P31949 105 aa17.18■□□□□ 0.34
LIME1-206ENST00000487026 RPL29P47914 159 aaKnown RBP17.18■□□□□ 0.34
LIME1-206ENST00000487026 SOHLH1Q5JUK2 328 aa17.18■□□□□ 0.34
LIME1-206ENST00000487026 RNF141Q8WVD5 230 aa17.18■□□□□ 0.34
LIME1-206ENST00000487026 PFDN5Q99471 154 aa17.18■□□□□ 0.34
LIME1-206ENST00000487026 CCDC32Q9BV29 185 aa17.18■□□□□ 0.34
LIME1-206ENST00000487026 FAM3BP58499 235 aaPredicted RBP17.17■□□□□ 0.34
LIME1-206ENST00000487026 GUK1Q16774 197 aa17.17■□□□□ 0.34
LIME1-206ENST00000487026 C20orf144Q9BQM9 153 aa17.17■□□□□ 0.34
LIME1-206ENST00000487026 PCLOQ9Y6V0 5065 aa17.17■□□□□ 0.34
LIME1-206ENST00000487026 TRAV12-3A0A0B4J271 114 aa17.16■□□□□ 0.34
LIME1-206ENST00000487026 FGF7P21781 194 aa17.16■□□□□ 0.34
LIME1-206ENST00000487026 STX12Q86Y82 276 aa17.16■□□□□ 0.34
LIME1-206ENST00000487026 CCDC28AQ8IWP9 274 aa17.16■□□□□ 0.34
LIME1-206ENST00000487026 ZNRF2Q8NHG8 242 aa17.16■□□□□ 0.34
LIME1-206ENST00000487026 NPIPB6E9PJ23 425 aa17.15■□□□□ 0.34
LIME1-206ENST00000487026 MED14OSP0DP75 135 aa17.15■□□□□ 0.34
LIME1-206ENST00000487026 HBG1P69891 147 aa17.15■□□□□ 0.34
LIME1-206ENST00000487026 HBG2P69892 147 aa17.15■□□□□ 0.34
LIME1-206ENST00000487026 OR5I1Q13606 314 aa17.15■□□□□ 0.34
LIME1-206ENST00000487026 GPN1Q9HCN4 374 aaPredicted RBP17.15■□□□□ 0.34
LIME1-206ENST00000487026 LINC00588Q9Y4M8 146 aa17.15■□□□□ 0.34
LIME1-206ENST00000487026 M0R3E3 92 aa17.14■□□□□ 0.33
LIME1-206ENST00000487026 LEPP41159 167 aa17.14■□□□□ 0.33
LIME1-206ENST00000487026 ERCC8Q13216 396 aa17.14■□□□□ 0.33
LIME1-206ENST00000487026 TRBV19A0A075B6N1 114 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 NBDYA0A0U1RRE5 68 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 GAGE12BA1L429 117 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 GAGE7O76087 117 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 GAGE12FP0CL80 117 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 GAGE12GP0CL81 117 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 GAGE12IP0CL82 117 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 PYYP10082 97 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 CCL18P55774 89 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 ATP6V1FQ16864 119 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 GCSAMLQ5JQS6 135 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 MZT2BQ6NZ67 158 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 CHAC2Q8WUX2 184 aa17.13■□□□□ 0.33
LIME1-206ENST00000487026 NDUFB4O95168 129 aa17.12■□□□□ 0.33
LIME1-206ENST00000487026 SIX6O95475 246 aa17.12■□□□□ 0.33
LIME1-206ENST00000487026 NHLH2Q02577 135 aa17.12■□□□□ 0.33
LIME1-206ENST00000487026 ZNF575Q86XF7 245 aa17.12■□□□□ 0.33
LIME1-206ENST00000487026 LINC00612Q8N6U2 182 aa17.12■□□□□ 0.33
LIME1-206ENST00000487026 TRAV26-1A0A087WT03 109 aa17.11■□□□□ 0.33
LIME1-206ENST00000487026 A0A0J9YY99 117 aa17.11■□□□□ 0.33
LIME1-206ENST00000487026 SNURFLB1AK76 121 aa17.11■□□□□ 0.33
LIME1-206ENST00000487026 ZNF253O75346 499 aa17.11■□□□□ 0.33
LIME1-206ENST00000487026 HOXA5P20719 270 aa17.11■□□□□ 0.33
LIME1-206ENST00000487026 CLINT1Q14677 625 aa17.11■□□□□ 0.33
LIME1-206ENST00000487026 BLNKQ8WV28 456 aa17.11■□□□□ 0.33
LIME1-206ENST00000487026 ODF3Q96PU9 254 aa17.11■□□□□ 0.33
LIME1-206ENST00000487026 TMEM14CQ9P0S9 112 aa17.11■□□□□ 0.33
LIME1-206ENST00000487026 TIMM9Q9Y5J7 89 aa17.11■□□□□ 0.33
LIME1-206ENST00000487026 RLN2P04090 185 aa17.1■□□□□ 0.33
LIME1-206ENST00000487026 HIST1H1EP10412 219 aaKnown RBP17.1■□□□□ 0.33
LIME1-206ENST00000487026 ASAH1Q13510 395 aa17.1■□□□□ 0.33
LIME1-206ENST00000487026 SSX7Q7RTT5 188 aa17.1■□□□□ 0.33
LIME1-206ENST00000487026 EXOC3-AS1Q8N2X6 119 aa17.1■□□□□ 0.33
LIME1-206ENST00000487026 THAP6Q8TBB0 222 aa17.1■□□□□ 0.33
LIME1-206ENST00000487026 GNPNAT1Q96EK6 184 aaPredicted RBP17.1■□□□□ 0.33
LIME1-206ENST00000487026 NPCDR1Q9BY65 106 aa17.1■□□□□ 0.33
LIME1-206ENST00000487026 TNP2Q05952 138 aa17.09■□□□□ 0.33
LIME1-206ENST00000487026 M6PRP20645 277 aa17.08■□□□□ 0.32
LIME1-206ENST00000487026 OR5C1Q8NGR4 320 aa17.08■□□□□ 0.32
LIME1-206ENST00000487026 MRPL53Q96EL3 112 aaKnown RBP17.08■□□□□ 0.32
LIME1-206ENST00000487026 PYGO2Q9BRQ0 406 aa17.08■□□□□ 0.32
LIME1-206ENST00000487026 AGPAT4-IT1Q9H0P7 198 aa17.08■□□□□ 0.32
LIME1-206ENST00000487026 MPDU1O75352 247 aa17.07■□□□□ 0.32
LIME1-206ENST00000487026 SLC25A5P05141 298 aaKnown RBP17.07■□□□□ 0.32
LIME1-206ENST00000487026 CD300CQ08708 224 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms