RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TEX46H3BTG2 121 aa9.48□□□□□ -0.89
HDAC6-229ENST00000486665 PAGE4O60829 102 aa9.48□□□□□ -0.89
HDAC6-229ENST00000486665 SNRPD3P62318 126 aaKnown RBP9.48□□□□□ -0.89
HDAC6-229ENST00000486665 LYPD1Q8N2G4 141 aa9.48□□□□□ -0.89
HDAC6-229ENST00000486665 WFDC10AQ9H1F0 79 aa9.48□□□□□ -0.89
HDAC6-229ENST00000486665 OTORQ9NRC9 128 aa9.48□□□□□ -0.89
HDAC6-229ENST00000486665 A0A1W2PRE2 83 aa9.47□□□□□ -0.89
HDAC6-229ENST00000486665 GGTLC3B5MD39 225 aa9.47□□□□□ -0.89
HDAC6-229ENST00000486665 F6UB75 175 aa9.47□□□□□ -0.89
HDAC6-229ENST00000486665 SUMO1P63165 101 aaKnown RBP9.47□□□□□ -0.89
HDAC6-229ENST00000486665 PMS2P11Q13670 270 aa9.47□□□□□ -0.89
HDAC6-229ENST00000486665 DEFB125Q8N687 156 aa9.47□□□□□ -0.89
HDAC6-229ENST00000486665 ZMAT5Q9UDW3 170 aaKnown RBP9.47□□□□□ -0.89
HDAC6-229ENST00000486665 DYNC2H1Q8NCM8 4307 aaKnown RBP9.47□□□□□ -0.89
HDAC6-229ENST00000486665 KNCNA6PVL3 124 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 OR11H12B2RN74 326 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 RGS13O14921 159 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 ZNF705DP0CH99 300 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-229ENST00000486665 ZNF705BP0CI00 300 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-229ENST00000486665 ATP5G3P48201 142 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 PPT1P50897 306 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 CMC4P56277 68 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-229ENST00000486665 RAB14P61106 215 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 GNG5P63218 68 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 HAGHQ16775 308 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 DEFB121Q5J5C9 76 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 CLLU1Q5K131 121 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 GDF5OSQ5U4N7 250 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 CST9LP1Q5W188 147 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 GTSCR1Q86UQ5 136 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 CCDC28AQ8IWP9 274 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 ZNF738Q8NE65 137 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 RPUSD4Q96CM3 377 aaKnown RBP9.46□□□□□ -0.9
HDAC6-229ENST00000486665 CITED4Q96RK1 184 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 RARRES2Q99969 163 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 AAMDCQ9H7C9 122 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 CLEC5AQ9NY25 188 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 PRELID1Q9Y255 219 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 DNAH7Q8WXX0 4024 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 SORL1Q92673 2214 aa9.46□□□□□ -0.9
HDAC6-229ENST00000486665 MRPL53Q96EL3 112 aaKnown RBP9.45□□□□□ -0.9
HDAC6-229ENST00000486665 FAM110AQ9BQ89 295 aa9.45□□□□□ -0.9
HDAC6-229ENST00000486665 MANBALQ9NQG1 85 aa9.45□□□□□ -0.9
HDAC6-229ENST00000486665 LOC102723971A0A1B0GUV8 181 aa9.44□□□□□ -0.9
HDAC6-229ENST00000486665 DIRC3C9JPN6 131 aa9.44□□□□□ -0.9
HDAC6-229ENST00000486665 SLC25A5P05141 298 aaKnown RBP9.44□□□□□ -0.9
HDAC6-229ENST00000486665 ACTL10Q5JWF8 245 aa9.44□□□□□ -0.9
HDAC6-229ENST00000486665 SAV1Q9H4B6 383 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-229ENST00000486665 EPDR1Q9UM22 224 aa9.44□□□□□ -0.9
HDAC6-229ENST00000486665 ARL2-SNX15V9GYD0 113 aa9.44□□□□□ -0.9
HDAC6-229ENST00000486665 IGKV2-40A0A087WW87 121 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-229ENST00000486665 A0A0J9YX75 114 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 RBFOX3A6NFN3 312 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 C11orf94C9JXX5 98 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 IFNA1P01562 189 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 IGKV2D-40P01614 121 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-229ENST00000486665 BCL2P10415 239 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 CSN1S1P47710 185 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 ERCC8Q13216 396 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 FOXI2Q6ZQN5 318 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 C5orf17Q8NAS9 161 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 CMTM2Q8TAZ6 248 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 RXFP4Q8TDU9 374 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 VGLL1Q99990 258 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 NKX6-2Q9C056 277 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-229ENST00000486665 VAX2Q9UIW0 290 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 RPH3ALQ9UNE2 315 aa9.43□□□□□ -0.9
HDAC6-229ENST00000486665 HUWE1Q7Z6Z7 4374 aaKnown RBP9.43□□□□□ -0.9
HDAC6-229ENST00000486665 STAB2Q8WWQ8 2551 aa9.42□□□□□ -0.9
HDAC6-229ENST00000486665 H3BMM0 161 aa9.42□□□□□ -0.9
HDAC6-229ENST00000486665 TCRAP04437 139 aa9.42□□□□□ -0.9
HDAC6-229ENST00000486665 SRSF3P84103 164 aaKnown RBP9.42□□□□□ -0.9
HDAC6-229ENST00000486665 TOR2AQ5JU69 321 aa9.42□□□□□ -0.9
HDAC6-229ENST00000486665 ZNF506Q5JVG8 444 aa9.42□□□□□ -0.9
HDAC6-229ENST00000486665 EBLN2Q6P2I7 272 aa9.42□□□□□ -0.9
HDAC6-229ENST00000486665 GOLT1AQ6ZVE7 132 aa9.42□□□□□ -0.9
HDAC6-229ENST00000486665 LINC00479Q96M42 142 aa9.42□□□□□ -0.9
HDAC6-229ENST00000486665 FAM210AQ96ND0 272 aa9.42□□□□□ -0.9
HDAC6-229ENST00000486665 B9D2Q9BPU9 175 aa9.42□□□□□ -0.9
HDAC6-229ENST00000486665 AGPAT4-IT1Q9H0P7 198 aa9.42□□□□□ -0.9
HDAC6-229ENST00000486665 RBMY1BA6NDE4 496 aaKnown RBP9.41□□□□□ -0.9
HDAC6-229ENST00000486665 RBMY1EA6NEQ0 496 aaKnown RBP9.41□□□□□ -0.9
HDAC6-229ENST00000486665 PEX7O00628 323 aa9.41□□□□□ -0.9
HDAC6-229ENST00000486665 IGKV3-20P01619 116 aa9.41□□□□□ -0.9
HDAC6-229ENST00000486665 RBMY1DP0C7P1 496 aaKnown RBP9.41□□□□□ -0.9
HDAC6-229ENST00000486665 HLA-DRB4P13762 266 aa9.41□□□□□ -0.9
HDAC6-229ENST00000486665 CNN1P51911 297 aaKnown RBP9.41□□□□□ -0.9
HDAC6-229ENST00000486665 MEF2BQ02080 365 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-229ENST00000486665 HIST1H1AQ02539 215 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-229ENST00000486665 ARL6IP6Q8N6S5 226 aa9.41□□□□□ -0.9
HDAC6-229ENST00000486665 SGK494Q96LW2 274 aa9.41□□□□□ -0.9
HDAC6-229ENST00000486665 WWC2-AS2Q96NR7 200 aa9.41□□□□□ -0.9
HDAC6-229ENST00000486665 ASCL2Q99929 193 aa9.41□□□□□ -0.9
HDAC6-229ENST00000486665 SRD5A3Q9H8P0 318 aa9.41□□□□□ -0.9
HDAC6-229ENST00000486665 HLA-DRB4X5D2U9 266 aa9.41□□□□□ -0.9
HDAC6-229ENST00000486665 TRAV34A0A0B4J273 112 aa9.4□□□□□ -0.9
HDAC6-229ENST00000486665 SCO2A0A1W2PP80 73 aa9.4□□□□□ -0.9
HDAC6-229ENST00000486665 C9JQL5 133 aa9.4□□□□□ -0.9
HDAC6-229ENST00000486665 NPIPB6E9PJ23 425 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms