RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 FMC1Q96HJ9 113 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 C9orf85Q96MD7 179 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 HSD17B10Q99714 261 aaKnown RBP5.16□□□□□ -1.58
HDAC3-209ENST00000486618 DERL1Q9BUN8 251 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 SMCO4Q9NRQ5 59 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 OR5AC2Q9NZP5 309 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 LAMTOR3Q9UHA4 124 aa5.16□□□□□ -1.58
HDAC3-209ENST00000486618 IGKV1-27A0A075B6S5 117 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 TRAV8-4A0A0B4J246 113 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 LOC100130705A0A1B0GUX0 176 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 A0A1B0GW64 132 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 GAGE12BA1L429 117 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 UPK1BO75841 260 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 P01737 135 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 PMP2P02689 132 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 CCL1P22362 96 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 PSMB8P28062 276 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 C17orf58Q2M2W7 97 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 RNASE12Q5GAN4 147 aaKnown RBP5.15□□□□□ -1.59
HDAC3-209ENST00000486618 IBA57Q5T440 356 aaKnown RBP5.15□□□□□ -1.59
HDAC3-209ENST00000486618 NXNL2Q5VZ03 156 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 CEACAM19Q7Z692 300 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 LYPD6Q86Y78 171 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 SGPP2Q8IWX5 399 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 TCEANCQ8N8B7 351 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 C5orf17Q8NAS9 161 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 OR51G1Q8NGK1 321 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 OR10D4PQ8NGN7 298 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 SRSF12Q8WXF0 261 aaKnown RBP5.15□□□□□ -1.59
HDAC3-209ENST00000486618 MIEN1Q9BRT3 115 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 TM2D1Q9BX74 207 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 SPANXDQ9BXN6 97 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 Q9HAA7 133 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 KCNIP1Q9NZI2 227 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 IL36RNQ9UBH0 155 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 ZNF580Q9UK33 172 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 VSIG4Q9Y279 399 aa5.15□□□□□ -1.59
HDAC3-209ENST00000486618 HUWE1Q7Z6Z7 4374 aaKnown RBP5.14□□□□□ -1.59
HDAC3-209ENST00000486618 TRGV11A0A075B6L2 103 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 RBMY1BA6NDE4 496 aaKnown RBP5.14□□□□□ -1.59
HDAC3-209ENST00000486618 RBMY1EA6NEQ0 496 aaKnown RBP5.14□□□□□ -1.59
HDAC3-209ENST00000486618 MSGN1A6NI15 193 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 TMEM212A6NML5 194 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 OR4C45A6NMZ5 311 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 SRSF10O75494 262 aaKnown RBP5.14□□□□□ -1.59
HDAC3-209ENST00000486618 ARL6IP5O75915 188 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 OR2A4O95047 310 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 GPX1P07203 203 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 RBMY1DP0C7P1 496 aaKnown RBP5.14□□□□□ -1.59
HDAC3-209ENST00000486618 IGHV4-30-4P0DP06 118 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 PGAM2P15259 253 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 RPL29P47914 159 aaKnown RBP5.14□□□□□ -1.59
HDAC3-209ENST00000486618 AKR1C2P52895 323 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 HBG1P69891 147 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 HBG2P69892 147 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 ZNF816Q0VGE8 651 aaPredicted RBP5.14□□□□□ -1.59
HDAC3-209ENST00000486618 DIAPH2-AS1Q14236 149 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 ZNF491Q8N8L2 437 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 Q8N9W7 124 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 OR5D14Q8NGL3 314 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 OR2A7Q96R45 310 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 OR4C12Q96R67 309 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 OR51E2Q9H255 320 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 TUBA4BQ9H853 241 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 ZNF586Q9NXT0 402 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 TAS2R8Q9NYW2 309 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 EHFQ9NZC4 300 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 VAX2Q9UIW0 290 aa5.14□□□□□ -1.59
HDAC3-209ENST00000486618 A0A087WXM4 84 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 TRAV26-2A0A0B4J265 109 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 IGHV1-3A0A0C4DH29 117 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 LOC107986453A0A1B0GWG9 222 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 LINC01619G3V211 115 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 G3V3Q6 166 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 BCL2L11O43521 198 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 DPM2O94777 84 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 IGHV3-7P01780 117 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 CGB3P0DN86 165 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 CGB7P0DN87 165 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 TPPP2P59282 170 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 ECSCRQ19T08 205 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 PVRIGQ6DKI7 326 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 SCGB1D4Q6XE38 83 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 Q6ZVQ6 151 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 DEFB125Q8N687 156 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 Q8N6K4 173 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 SUMF2Q8NBJ7 301 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 MYOZ3Q8TDC0 251 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 RAB2BQ8WUD1 216 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 LEAP2Q969E1 77 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 RDH12Q96NR8 316 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 AP1S3Q96PC3 154 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 LINC00574Q9H8X3 128 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 GNB4Q9HAV0 340 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 CALYQ9NYX4 217 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 YTHDF2Q9Y5A9 579 aaKnown RBP5.13□□□□□ -1.59
HDAC3-209ENST00000486618 CSMD3Q7Z407 3707 aa5.13□□□□□ -1.59
HDAC3-209ENST00000486618 IGHV3-72A0A0B4J1Y9 119 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 TRAV8-2A0A0B4J237 113 aa5.12□□□□□ -1.59
HDAC3-209ENST00000486618 A0A1B0GWB2 263 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms