RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 MRPL53Q96EL3 112 aaKnown RBP13.14□□□□□ -0.31
COL1A1-207ENST00000486572 KMT2CQ8NEZ4 4911 aaKnown RBP13.13□□□□□ -0.31
COL1A1-207ENST00000486572 TENM2Q9NT68 2774 aa13.13□□□□□ -0.31
COL1A1-207ENST00000486572 CRXO43186 299 aaPredicted RBP13.13□□□□□ -0.31
COL1A1-207ENST00000486572 OR10J4P0C629 311 aa13.13□□□□□ -0.31
COL1A1-207ENST00000486572 NBEAP1P0C6P0 100 aa13.13□□□□□ -0.31
COL1A1-207ENST00000486572 M6PRP20645 277 aa13.13□□□□□ -0.31
COL1A1-207ENST00000486572 TAS2R45P59539 299 aa13.13□□□□□ -0.31
COL1A1-207ENST00000486572 NANOS2P60321 138 aaKnown RBP13.13□□□□□ -0.31
COL1A1-207ENST00000486572 KHDC3LQ587J8 217 aa13.13□□□□□ -0.31
COL1A1-207ENST00000486572 RNF141Q8WVD5 230 aa13.13□□□□□ -0.31
COL1A1-207ENST00000486572 FXYD5Q96DB9 178 aa13.13□□□□□ -0.31
COL1A1-207ENST00000486572 AAMDCQ9H7C9 122 aa13.13□□□□□ -0.31
COL1A1-207ENST00000486572 PRELID1Q9Y255 219 aa13.13□□□□□ -0.31
COL1A1-207ENST00000486572 BAP18Q8IXM2 172 aa13.12□□□□□ -0.31
COL1A1-207ENST00000486572 OR2G3Q8NGZ4 309 aa13.12□□□□□ -0.31
COL1A1-207ENST00000486572 PSMG3Q9BT73 122 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-207ENST00000486572 TMEM208Q9BTX3 173 aa13.12□□□□□ -0.31
COL1A1-207ENST00000486572 STARD9Q9P2P6 4700 aa13.11□□□□□ -0.31
COL1A1-207ENST00000486572 M0R3E3 92 aa13.11□□□□□ -0.31
COL1A1-207ENST00000486572 RAB2AP61019 212 aa13.11□□□□□ -0.31
COL1A1-207ENST00000486572 UBE2L3P68036 154 aaKnown RBP13.11□□□□□ -0.31
COL1A1-207ENST00000486572 CEMP1Q6PRD7 247 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-207ENST00000486572 EXOC3-AS1Q8N2X6 119 aa13.11□□□□□ -0.31
COL1A1-207ENST00000486572 PHLDA1Q8WV24 401 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-207ENST00000486572 ZNF503Q96F45 646 aa13.11□□□□□ -0.31
COL1A1-207ENST00000486572 TRAV12-2A0A075B6T6 113 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 BORCS7-ASMTA0A0B4J1R7 106 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 A0A1W2PPV4 95 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 TMEM189A5PLL7 270 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 NPIPB6E9PJ23 425 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 ARPC5O15511 151 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 HBE1P02100 147 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 ATP6V0CP27449 155 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 CDKN1BP46527 198 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 ICAM4Q14773 271 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 OR10G4Q8NGN3 311 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 OR10G9Q8NGN4 311 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 OR10G7Q8NGN6 311 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 PHYHIPLQ96FC7 376 aa13.1□□□□□ -0.31
COL1A1-207ENST00000486572 SMLR1H3BR10 107 aa13.09□□□□□ -0.31
COL1A1-207ENST00000486572 TSPOP30536 169 aa13.09□□□□□ -0.31
COL1A1-207ENST00000486572 RRN3P1Q2M238 152 aa13.09□□□□□ -0.31
COL1A1-207ENST00000486572 RPL7L1Q6DKI1 246 aaKnown RBP13.09□□□□□ -0.31
COL1A1-207ENST00000486572 FAM122CQ6P4D5 195 aa13.09□□□□□ -0.31
COL1A1-207ENST00000486572 RPP25LQ8N5L8 163 aaKnown RBP13.09□□□□□ -0.31
COL1A1-207ENST00000486572 KLK5Q9Y337 293 aaPredicted RBP13.09□□□□□ -0.31
COL1A1-207ENST00000486572 LCE6AA0A183 80 aa13.08□□□□□ -0.32
COL1A1-207ENST00000486572 EIF3GO75821 320 aaKnown RBP eCLIP13.08□□□□□ -0.32
COL1A1-207ENST00000486572 SERF2P84101 59 aa13.08□□□□□ -0.32
COL1A1-207ENST00000486572 PQLC2Q6ZP29 291 aa13.08□□□□□ -0.32
COL1A1-207ENST00000486572 GNPNAT1Q96EK6 184 aaPredicted RBP13.08□□□□□ -0.32
COL1A1-207ENST00000486572 ODF3Q96PU9 254 aa13.08□□□□□ -0.32
COL1A1-207ENST00000486572 SH3BGRL3Q9H299 93 aa13.08□□□□□ -0.32
COL1A1-207ENST00000486572 CELA1Q9UNI1 258 aa13.08□□□□□ -0.32
COL1A1-207ENST00000486572 LOC102723971A0A1B0GUV8 181 aa13.07□□□□□ -0.32
COL1A1-207ENST00000486572 MBP02144 154 aa13.07□□□□□ -0.32
COL1A1-207ENST00000486572 CDC34P49427 236 aaPredicted RBP13.07□□□□□ -0.32
COL1A1-207ENST00000486572 EMP1P54849 157 aa13.07□□□□□ -0.32
COL1A1-207ENST00000486572 LYPD1Q8N2G4 141 aa13.07□□□□□ -0.32
COL1A1-207ENST00000486572 TMEM256Q8N2U0 113 aa13.07□□□□□ -0.32
COL1A1-207ENST00000486572 C11orf94C9JXX5 98 aa13.06□□□□□ -0.32
COL1A1-207ENST00000486572 TAAR5O14804 337 aa13.06□□□□□ -0.32
COL1A1-207ENST00000486572 JTBO76095 146 aa13.06□□□□□ -0.32
COL1A1-207ENST00000486572 CT45A10P0DMU9 189 aa13.06□□□□□ -0.32
COL1A1-207ENST00000486572 LEPP41159 167 aa13.06□□□□□ -0.32
COL1A1-207ENST00000486572 RANP62826 216 aaKnown RBP13.06□□□□□ -0.32
COL1A1-207ENST00000486572 Q9H3A6 140 aa13.06□□□□□ -0.32
COL1A1-207ENST00000486572 HMGB3O15347 200 aaKnown RBP13.05□□□□□ -0.32
COL1A1-207ENST00000486572 SPART-AS1P0CW21 52 aa13.05□□□□□ -0.32
COL1A1-207ENST00000486572 ERCC8Q13216 396 aa13.05□□□□□ -0.32
COL1A1-207ENST00000486572 GFI1BQ5VTD9 330 aa13.05□□□□□ -0.32
COL1A1-207ENST00000486572 Q6ZTC4 211 aa13.05□□□□□ -0.32
COL1A1-207ENST00000486572 C20orf144Q9BQM9 153 aa13.05□□□□□ -0.32
COL1A1-207ENST00000486572 IGKV2-40A0A087WW87 121 aaPredicted RBP13.04□□□□□ -0.32
COL1A1-207ENST00000486572 TEX48A0A1B0GUV7 120 aa13.04□□□□□ -0.32
COL1A1-207ENST00000486572 ZNF705GA8MUZ8 300 aaPredicted RBP13.04□□□□□ -0.32
COL1A1-207ENST00000486572 IGKV2D-40P01614 121 aaPredicted RBP13.04□□□□□ -0.32
COL1A1-207ENST00000486572 CSN1S1P47710 185 aa13.04□□□□□ -0.32
COL1A1-207ENST00000486572 ZNF345Q14585 488 aa13.04□□□□□ -0.32
COL1A1-207ENST00000486572 KIR3DS1Q14943 382 aa13.04□□□□□ -0.32
COL1A1-207ENST00000486572 C9orf47Q6ZRZ4 202 aa13.04□□□□□ -0.32
COL1A1-207ENST00000486572 RAB24Q969Q5 203 aa13.04□□□□□ -0.32
COL1A1-207ENST00000486572 LINC00477Q96M19 166 aa13.04□□□□□ -0.32
COL1A1-207ENST00000486572 LINC01587Q99440 93 aa13.04□□□□□ -0.32
COL1A1-207ENST00000486572 AGPAT4-IT1Q9H0P7 198 aa13.04□□□□□ -0.32
COL1A1-207ENST00000486572 YTHDF2Q9Y5A9 579 aaKnown RBP13.04□□□□□ -0.32
COL1A1-207ENST00000486572 H7BYZ3 331 aa13.03□□□□□ -0.32
COL1A1-207ENST00000486572 STAG3L2P0CL84 134 aa13.03□□□□□ -0.32
COL1A1-207ENST00000486572 STAG3L3P0CL85 134 aa13.03□□□□□ -0.32
COL1A1-207ENST00000486572 ARL14EPLP0DKL9 152 aa13.03□□□□□ -0.32
COL1A1-207ENST00000486572 TAS2R60P59551 318 aa13.03□□□□□ -0.32
COL1A1-207ENST00000486572 C12orf74Q32Q52 190 aa13.03□□□□□ -0.32
COL1A1-207ENST00000486572 TMEM78Q5T7P6 136 aa13.03□□□□□ -0.32
COL1A1-207ENST00000486572 FAM222AQ5U5X8 452 aa13.03□□□□□ -0.32
COL1A1-207ENST00000486572 ZNF767PQ75MW2 155 aa13.03□□□□□ -0.32
COL1A1-207ENST00000486572 DKK2Q9UBU2 259 aa13.03□□□□□ -0.32
COL1A1-207ENST00000486572 TRAV10A0A0B4J240 114 aa13.02□□□□□ -0.33
COL1A1-207ENST00000486572 HMSDA8MTL9 139 aa13.02□□□□□ -0.33
COL1A1-207ENST00000486572 J3KRW8 73 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms