RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 OSTCQ9NRP0 149 aa11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 SERTAD4Q9NUC0 356 aa11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 MLXQ9UH92 298 aa11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 A0A1W2PS18 150 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 C1orf196B1AJZ1 125 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 ZNF207O43670 478 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 RPLP1P05386 114 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 OR5I1Q13606 314 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 FAM106AQ4KMX7 169 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 C16orf54Q6UWD8 224 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 UNQ9165/PRO28630Q6UXU0 137 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 GOLT1AQ6ZVE7 132 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 KLHDC1Q8N7A1 406 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 TMEM75Q8N9X5 138 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 GRAMD2BQ96HH9 432 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 FAM210BQ96KR6 192 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 UBE2E2Q96LR5 201 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 PYGO2Q9BRQ0 406 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 SLC50A1Q9BRV3 221 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 BIN3Q9NQY0 253 aa11.15□□□□□ -0.62
POLR2J3-204ENST00000486319 DIRC3C9JPN6 131 aa11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 LTAP01374 205 aa11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 APOHP02749 345 aaPredicted RBP11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 IBA57Q5T440 356 aaKnown RBP11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 FAM231DQ6ZW35 169 aa11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 GPHB5Q86YW7 130 aa11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 ZNF331Q9NQX6 463 aaPredicted RBP11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 IGHV3-66A0A0C4DH42 116 aa11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 ZNF320A2RRD8 509 aa11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 K7EMT4 169 aa11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 M0QZ24 198 aa11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 LGALS1P09382 135 aaKnown RBP11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 RPS10P46783 165 aaKnown RBP11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 RAB5BP61020 215 aa11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 C1QL4Q86Z23 238 aa11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 IL36BQ9NZH7 164 aa11.14□□□□□ -0.63
POLR2J3-204ENST00000486319 IGHV3OR16-13A0A075B7E8 117 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 IGHV3-49A0A0A0MS15 119 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 IGHV3-74A0A0B4J1X5 117 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 FBLL1A6NHQ2 334 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 FLI1Q01543 452 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 PSG3Q16557 428 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 Q86TA4 180 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 TMEM183AQ8IXX5 376 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 C11orf44Q8N8P7 122 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 NHLRC2Q8NBF2 726 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 GLMPQ8WWB7 406 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 SGK494Q96LW2 274 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 MLST8Q9BVC4 326 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 DAZ1Q9NQZ3 744 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 CLEC5AQ9NY25 188 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 V9GYV3 84 aa11.13□□□□□ -0.63
POLR2J3-204ENST00000486319 TRAV9-1A0A075B6T8 112 aa11.12□□□□□ -0.63
POLR2J3-204ENST00000486319 A0A1W2PPQ1 181 aa11.12□□□□□ -0.63
POLR2J3-204ENST00000486319 M0R3E3 92 aa11.12□□□□□ -0.63
POLR2J3-204ENST00000486319 IGLV2-11P01706 119 aa11.12□□□□□ -0.63
POLR2J3-204ENST00000486319 RPEL1Q2QD12 228 aa11.12□□□□□ -0.63
POLR2J3-204ENST00000486319 RNASE7Q9H1E1 156 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-204ENST00000486319 ZFP30Q9Y2G7 519 aa11.12□□□□□ -0.63
POLR2J3-204ENST00000486319 UFC1Q9Y3C8 167 aa11.12□□□□□ -0.63
POLR2J3-204ENST00000486319 NBEAL1Q6ZS30 2694 aa11.11□□□□□ -0.63
POLR2J3-204ENST00000486319 IGHV7-4-1A0A0J9YVY3 117 aa11.11□□□□□ -0.63
POLR2J3-204ENST00000486319 PRNTQ86SH4 94 aa11.11□□□□□ -0.63
POLR2J3-204ENST00000486319 PSG8Q9UQ74 426 aa11.11□□□□□ -0.63
POLR2J3-204ENST00000486319 TRAV8-1A0A0A6YYK1 113 aa11.1□□□□□ -0.63
POLR2J3-204ENST00000486319 CHEK1O14757 476 aa11.1□□□□□ -0.63
POLR2J3-204ENST00000486319 BMI1P35226 326 aa11.1□□□□□ -0.63
POLR2J3-204ENST00000486319 FAM3BP58499 235 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-204ENST00000486319 MRPL53Q96EL3 112 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-204ENST00000486319 SRD5A3Q9H8P0 318 aa11.1□□□□□ -0.63
POLR2J3-204ENST00000486319 ZNF492Q9P255 531 aa11.1□□□□□ -0.63
POLR2J3-204ENST00000486319 ZNF705GA8MUZ8 300 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 GATCO43716 136 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 TYMSP04818 313 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 CDX1P47902 265 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 HIST2H2BDQ6DRA6 164 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 LCN12Q6JVE5 192 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 PRR27Q6MZM9 219 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 C8orf86Q6ZUL3 223 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 NUDT10Q8NFP7 164 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 NUDT11Q96G61 164 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 SMPXQ9UHP9 88 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 MGAM2Q2M2H8 2515 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 CD28P10747 220 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 RPL19P84098 196 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 TM4SF20Q53R12 229 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 REC114Q7Z4M0 266 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 WIPF2Q8TF74 440 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 DAZAP1Q96EP5 407 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 RHPN1-AS1Q9BWJ2 59 aa11.09□□□□□ -0.63
POLR2J3-204ENST00000486319 LOC105371267A0A1B0GV96 52 aa11.08□□□□□ -0.64
POLR2J3-204ENST00000486319 RBAKDNA6NC62 111 aa11.08□□□□□ -0.64
POLR2J3-204ENST00000486319 LGALS9O00182 355 aa11.08□□□□□ -0.64
POLR2J3-204ENST00000486319 SAPCD1Q5SSQ6 148 aa11.08□□□□□ -0.64
POLR2J3-204ENST00000486319 ZFP82Q8N141 532 aa11.08□□□□□ -0.64
POLR2J3-204ENST00000486319 PKD1L1Q8TDX9 2849 aa11.07□□□□□ -0.64
POLR2J3-204ENST00000486319 IGHV4OR15-8A0A075B7B6 117 aa11.07□□□□□ -0.64
POLR2J3-204ENST00000486319 A0A087WW49 117 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms