RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 IFITM3Q01628 133 aa15.6■□□□□ 0.09
HLA-F-228ENST00000486194 ZNF493Q6ZR52 646 aa15.6■□□□□ 0.09
HLA-F-228ENST00000486194 OR5C1Q8NGR4 320 aa15.6■□□□□ 0.09
HLA-F-228ENST00000486194 C16orf74Q96GX8 76 aa15.6■□□□□ 0.09
HLA-F-228ENST00000486194 NPCDR1Q9BY65 106 aa15.6■□□□□ 0.09
HLA-F-228ENST00000486194 TMEM14CQ9P0S9 112 aa15.6■□□□□ 0.09
HLA-F-228ENST00000486194 H7BYZ3 331 aa15.59■□□□□ 0.09
HLA-F-228ENST00000486194 NHLH2Q02577 135 aa15.59■□□□□ 0.09
HLA-F-228ENST00000486194 LRRC37A5PQ49AS3 106 aa15.59■□□□□ 0.09
HLA-F-228ENST00000486194 MRPL53Q96EL3 112 aaKnown RBP15.59■□□□□ 0.09
HLA-F-228ENST00000486194 MARVELD1Q9BSK0 173 aa15.59■□□□□ 0.09
HLA-F-228ENST00000486194 KCNIP2Q9NS61 270 aa15.59■□□□□ 0.09
HLA-F-228ENST00000486194 KMT2AQ03164 3969 aa15.59■□□□□ 0.09
HLA-F-228ENST00000486194 PRM2P04554 102 aa15.58■□□□□ 0.08
HLA-F-228ENST00000486194 HTN1P15515 57 aa15.58■□□□□ 0.08
HLA-F-228ENST00000486194 PDE6HQ13956 83 aa15.58■□□□□ 0.08
HLA-F-228ENST00000486194 ODF3Q96PU9 254 aa15.58■□□□□ 0.08
HLA-F-228ENST00000486194 ZNF586Q9NXT0 402 aa15.58■□□□□ 0.08
HLA-F-228ENST00000486194 BIRC6Q9NR09 4857 aa15.58■□□□□ 0.08
HLA-F-228ENST00000486194 TRBV19A0A075B6N1 114 aa15.57■□□□□ 0.08
HLA-F-228ENST00000486194 PRAC2D3DTV9 90 aa15.57■□□□□ 0.08
HLA-F-228ENST00000486194 DEFB130BP0DP73 79 aa15.57■□□□□ 0.08
HLA-F-228ENST00000486194 DEFB130AP0DP74 79 aa15.57■□□□□ 0.08
HLA-F-228ENST00000486194 HIST1H1EP10412 219 aaKnown RBP15.57■□□□□ 0.08
HLA-F-228ENST00000486194 AZU1P20160 251 aa15.57■□□□□ 0.08
HLA-F-228ENST00000486194 LEPP41159 167 aa15.57■□□□□ 0.08
HLA-F-228ENST00000486194 UBE2DNLQ8IWF7 75 aa15.57■□□□□ 0.08
HLA-F-228ENST00000486194 OR5AC2Q9NZP5 309 aa15.57■□□□□ 0.08
HLA-F-228ENST00000486194 PRELID1Q9Y255 219 aa15.57■□□□□ 0.08
HLA-F-228ENST00000486194 TIMM8BQ9Y5J9 83 aaPredicted RBP15.57■□□□□ 0.08
HLA-F-228ENST00000486194 PET100P0DJ07 73 aa15.56■□□□□ 0.08
HLA-F-228ENST00000486194 PRB4P10163 310 aaPredicted RBP15.56■□□□□ 0.08
HLA-F-228ENST00000486194 TMEM88Q6PEY1 159 aa15.56■□□□□ 0.08
HLA-F-228ENST00000486194 C15orf53Q8NAA6 179 aa15.56■□□□□ 0.08
HLA-F-228ENST00000486194 THAP6Q8TBB0 222 aa15.56■□□□□ 0.08
HLA-F-228ENST00000486194 TMEM263Q8WUH6 116 aaKnown RBP15.56■□□□□ 0.08
HLA-F-228ENST00000486194 TIMM9Q9Y5J7 89 aa15.56■□□□□ 0.08
HLA-F-228ENST00000486194 PLAC8L1A1L4L8 177 aa15.55■□□□□ 0.08
HLA-F-228ENST00000486194 NPIPB6E9PJ23 425 aa15.55■□□□□ 0.08
HLA-F-228ENST00000486194 SSNA1O43805 119 aa15.55■□□□□ 0.08
HLA-F-228ENST00000486194 CLINT1Q14677 625 aa15.55■□□□□ 0.08
HLA-F-228ENST00000486194 RNF212Q495C1 297 aa15.55■□□□□ 0.08
HLA-F-228ENST00000486194 CCDC28AQ8IWP9 274 aa15.55■□□□□ 0.08
HLA-F-228ENST00000486194 BATF3Q9NR55 127 aa15.55■□□□□ 0.08
HLA-F-228ENST00000486194 C17orf112F2Z3M2 114 aa15.54■□□□□ 0.08
HLA-F-228ENST00000486194 ATP5G1P05496 136 aa15.54■□□□□ 0.08
HLA-F-228ENST00000486194 ATP5G3P48201 142 aa15.54■□□□□ 0.08
HLA-F-228ENST00000486194 GFI1BQ5VTD9 330 aa15.54■□□□□ 0.08
HLA-F-228ENST00000486194 PPP1R1CQ8WVI7 109 aa15.54■□□□□ 0.08
HLA-F-228ENST00000486194 AAMDCQ9H7C9 122 aa15.54■□□□□ 0.08
HLA-F-228ENST00000486194 CBY3A6NI87 242 aa15.53■□□□□ 0.08
HLA-F-228ENST00000486194 H0YIZ8 118 aa15.53■□□□□ 0.08
HLA-F-228ENST00000486194 H2BFSP57053 126 aa15.53■□□□□ 0.08
HLA-F-228ENST00000486194 LINC00336Q6ZUF6 198 aa15.53■□□□□ 0.08
HLA-F-228ENST00000486194 RNASE8Q8TDE3 154 aaKnown RBP15.53■□□□□ 0.08
HLA-F-228ENST00000486194 WDR61Q9GZS3 305 aaKnown RBP15.53■□□□□ 0.08
HLA-F-228ENST00000486194 CT45A10P0DMU9 189 aa15.52■□□□□ 0.08
HLA-F-228ENST00000486194 GCSAMLQ5JQS6 135 aa15.52■□□□□ 0.08
HLA-F-228ENST00000486194 MRPL32Q9BYC8 188 aaKnown RBP15.52■□□□□ 0.08
HLA-F-228ENST00000486194 PARD6GQ9BYG4 376 aaPredicted RBP15.52■□□□□ 0.08
HLA-F-228ENST00000486194 VPS13DQ5THJ4 4388 aa15.52■□□□□ 0.07
HLA-F-228ENST00000486194 F5H768 121 aa15.51■□□□□ 0.07
HLA-F-228ENST00000486194 NDUFB4O95168 129 aa15.51■□□□□ 0.07
HLA-F-228ENST00000486194 PYYP10082 97 aa15.51■□□□□ 0.07
HLA-F-228ENST00000486194 KIR3DS1Q14943 382 aa15.51■□□□□ 0.07
HLA-F-228ENST00000486194 FCN2Q15485 313 aa15.51■□□□□ 0.07
HLA-F-228ENST00000486194 BLNKQ8WV28 456 aa15.51■□□□□ 0.07
HLA-F-228ENST00000486194 LINC00477Q96M19 166 aa15.51■□□□□ 0.07
HLA-F-228ENST00000486194 ATP5SQ99766 215 aa15.51■□□□□ 0.07
HLA-F-228ENST00000486194 SLC25A2Q9BXI2 301 aa15.51■□□□□ 0.07
HLA-F-228ENST00000486194 M0R3E3 92 aa15.5■□□□□ 0.07
HLA-F-228ENST00000486194 MPC2O95563 127 aa15.5■□□□□ 0.07
HLA-F-228ENST00000486194 SLC25A5P05141 298 aaKnown RBP15.5■□□□□ 0.07
HLA-F-228ENST00000486194 LGALS9BQ3B8N2 356 aa15.5■□□□□ 0.07
HLA-F-228ENST00000486194 PYGO2Q9BRQ0 406 aa15.5■□□□□ 0.07
HLA-F-228ENST00000486194 OR51M1Q9H341 326 aa15.5■□□□□ 0.07
HLA-F-228ENST00000486194 NOP10Q9NPE3 64 aaKnown RBP15.5■□□□□ 0.07
HLA-F-228ENST00000486194 J3KRW8 73 aa15.49■□□□□ 0.07
HLA-F-228ENST00000486194 FAM3BP58499 235 aaPredicted RBP15.49■□□□□ 0.07
HLA-F-228ENST00000486194 HSPB11Q9Y547 144 aa15.49■□□□□ 0.07
HLA-F-228ENST00000486194 TRAV12-3A0A0B4J271 114 aa15.48■□□□□ 0.07
HLA-F-228ENST00000486194 SNURFLB1AK76 121 aa15.48■□□□□ 0.07
HLA-F-228ENST00000486194 IFNA5P01569 189 aa15.48■□□□□ 0.07
HLA-F-228ENST00000486194 NBEAP1P0C6P0 100 aa15.48■□□□□ 0.07
HLA-F-228ENST00000486194 MIR17HGQ75NE6 70 aa15.48■□□□□ 0.07
HLA-F-228ENST00000486194 EXOC3-AS1Q8N2X6 119 aa15.48■□□□□ 0.07
HLA-F-228ENST00000486194 FAM167A-AS1Q96KT0 104 aa15.48■□□□□ 0.07
HLA-F-228ENST00000486194 PAXXQ9BUH6 204 aa15.48■□□□□ 0.07
HLA-F-228ENST00000486194 FUT9Q9Y231 359 aa15.48■□□□□ 0.07
HLA-F-228ENST00000486194 M0R2N4 97 aa15.47■□□□□ 0.07
HLA-F-228ENST00000486194 ICAM4Q14773 271 aa15.47■□□□□ 0.07
HLA-F-228ENST00000486194 SCGB1C1Q8TD33 95 aa15.47■□□□□ 0.07
HLA-F-228ENST00000486194 ATG101Q9BSB4 218 aa15.47■□□□□ 0.07
HLA-F-228ENST00000486194 C7orf71A4D174 169 aa15.46■□□□□ 0.07
HLA-F-228ENST00000486194 RPL12P30050 165 aaKnown RBP15.46■□□□□ 0.07
HLA-F-228ENST00000486194 ERCC8Q13216 396 aa15.46■□□□□ 0.07
HLA-F-228ENST00000486194 TMEM78Q5T7P6 136 aa15.46■□□□□ 0.07
HLA-F-228ENST00000486194 C9orf47Q6ZRZ4 202 aa15.46■□□□□ 0.07
HLA-F-228ENST00000486194 AGPAT4-IT1Q9H0P7 198 aa15.46■□□□□ 0.07
HLA-F-228ENST00000486194 NMBP08949 121 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms