RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 BIN3Q9NQY0 253 aa0.43□□□□□ -2.34
GCFC2-209ENST00000486016 ASCC3Q8N3C0 2202 aaKnown RBP0.43□□□□□ -2.34
GCFC2-209ENST00000486016 CHD3Q12873 2000 aaKnown RBP0.43□□□□□ -2.34
GCFC2-209ENST00000486016 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 CITO14578 2027 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 ERBINQ96RT1 1412 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 A0A096LPI6 279 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 CD14P08571 375 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 GNG10P50151 68 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 MIR22HGQ0VDD5 57 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 C3orf33Q6P1S2 294 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 FOXI2Q6ZQN5 318 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 CROCCP2Q86T23 111 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 OR10AC1Q8NH08 325 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 DYDC1Q8WWB3 177 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 BORCS8Q96FH0 119 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 TCEAL2Q9H3H9 227 aaPredicted RBP0.42□□□□□ -2.34
GCFC2-209ENST00000486016 MED11Q9P086 117 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 HSPB8Q9UJY1 196 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 RTL9Q8NET4 1388 aa0.42□□□□□ -2.34
GCFC2-209ENST00000486016 MYH2Q9UKX2 1941 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 E5RI56 91 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 PPP5D1E7EU14 171 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 H3BQV1 296 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 MT-ND6P03923 174 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 TRIQKQ629K1 86 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 PRR15Q8IV56 129 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 CST11Q9H112 138 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 LRTM1Q9HBL6 345 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 TAF9BQ9HBM6 251 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 LAMTOR3Q9UHA4 124 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 NAT8BQ9UHF3 227 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 NUBP2Q9Y5Y2 271 aa0.41□□□□□ -2.34
GCFC2-209ENST00000486016 SYNMO15061 1565 aa0.4□□□□□ -2.34
GCFC2-209ENST00000486016 PIK3C2AO00443 1686 aa0.4□□□□□ -2.34
GCFC2-209ENST00000486016 TECPR2O15040 1411 aa0.4□□□□□ -2.34
GCFC2-209ENST00000486016 YTHDC2Q9H6S0 1430 aaKnown RBP0.4□□□□□ -2.34
GCFC2-209ENST00000486016 TRDV1A0A1B0GX56 115 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 MAP1LC3B2A6NCE7 125 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 KPNA4O00629 521 aaPredicted RBP0.4□□□□□ -2.35
GCFC2-209ENST00000486016 IGHV3-33P01772 117 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 FXYD4P59646 89 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 DIAPH2-AS1Q14236 149 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 VMA21Q3ZAQ7 101 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 OCIAD2Q56VL3 154 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 DCUN1D2Q6PH85 259 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 ZCCHC23Q6ZST2 131 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 LINC00269Q8N2A0 174 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 DIRC1Q969H9 104 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 LIMD2Q9BT23 127 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 IL20Q9NYY1 176 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 TPRKBQ9Y3C4 175 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 ROCK1Q13464 1354 aa0.4□□□□□ -2.35
GCFC2-209ENST00000486016 KMT2DO14686 5537 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 BCL9O00512 1426 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 MYH3P11055 1940 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 GABARAPH6UMI1 98 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 H7BYZ3 331 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 K7EIL1 84 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 FABP2P12104 132 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 FABP4P15090 132 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 TMEM78Q5T7P6 136 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 SPATA8Q6RVD6 105 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 ANGPTL5Q86XS5 388 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 CCL4L1Q8NHW4 92 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 ISOC1Q96CN7 298 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 MCEEQ96PE7 176 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 OR4C12Q96R67 309 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 EFCAB11Q9BUY7 163 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 C10orf95Q9H7T3 257 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 ADGBQ8N7X0 1667 aa0.39□□□□□ -2.35
GCFC2-209ENST00000486016 KIAA1107Q9UPP5 1409 aa0.38□□□□□ -2.35
GCFC2-209ENST00000486016 TRAPPC8Q9Y2L5 1435 aa0.38□□□□□ -2.35
GCFC2-209ENST00000486016 A0A0D9SG42 100 aa0.38□□□□□ -2.35
GCFC2-209ENST00000486016 TRBV30A0A0K0K1B3 111 aa0.38□□□□□ -2.35
GCFC2-209ENST00000486016 NUPR2A6NF83 97 aa0.38□□□□□ -2.35
GCFC2-209ENST00000486016 ZNF727A8MUV8 499 aa0.38□□□□□ -2.35
GCFC2-209ENST00000486016 FOXA3P55318 350 aaPredicted RBP0.38□□□□□ -2.35
GCFC2-209ENST00000486016 MRPS36P82909 103 aaKnown RBP0.38□□□□□ -2.35
GCFC2-209ENST00000486016 SPINK9Q5DT21 86 aa0.38□□□□□ -2.35
GCFC2-209ENST00000486016 LINC00299Q6ZSB3 139 aa0.38□□□□□ -2.35
GCFC2-209ENST00000486016 STX12Q86Y82 276 aa0.38□□□□□ -2.35
GCFC2-209ENST00000486016 OR4B1Q8NGF8 309 aa0.38□□□□□ -2.35
GCFC2-209ENST00000486016 PCBD2Q9H0N5 130 aa0.38□□□□□ -2.35
GCFC2-209ENST00000486016 FANCMQ8IYD8 2048 aa0.38□□□□□ -2.35
GCFC2-209ENST00000486016 ZFC3H1O60293 1989 aaKnown RBP0.37□□□□□ -2.35
GCFC2-209ENST00000486016 A0A0J9YY99 117 aa0.37□□□□□ -2.35
GCFC2-209ENST00000486016 BCL2P10415 239 aa0.37□□□□□ -2.35
GCFC2-209ENST00000486016 PDE6GP18545 87 aa0.37□□□□□ -2.35
GCFC2-209ENST00000486016 S100A11P31949 105 aa0.37□□□□□ -2.35
GCFC2-209ENST00000486016 OR5H6Q8NGV6 325 aa0.37□□□□□ -2.35
GCFC2-209ENST00000486016 NIT2Q9NQR4 276 aa0.37□□□□□ -2.35
GCFC2-209ENST00000486016 BOKQ9UMX3 212 aaPredicted RBP0.37□□□□□ -2.35
GCFC2-209ENST00000486016 MUC4Q99102 2169 aa0.36□□□□□ -2.35
GCFC2-209ENST00000486016 C3orf85A0A1B0GTC6 90 aa0.36□□□□□ -2.35
GCFC2-209ENST00000486016 A0A1W2PRE2 83 aa0.36□□□□□ -2.35
GCFC2-209ENST00000486016 C5orf58C9J3I9 102 aa0.36□□□□□ -2.35
GCFC2-209ENST00000486016 TRACP01848 142 aa0.36□□□□□ -2.35
GCFC2-209ENST00000486016 SDC2P34741 201 aa0.36□□□□□ -2.35
GCFC2-209ENST00000486016 RPL37AP61513 92 aaKnown RBP0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms