RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 OR4C16Q8NGL9 310 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 OR5H2Q8NGV7 314 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 SGMS2Q8NHU3 365 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 RAB2BQ8WUD1 216 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 TOMM6Q96B49 74 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 SLAMF6Q96DU3 332 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 BORCS8Q96FH0 119 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 TRIB3Q96RU7 358 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 PEBP4Q96S96 227 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 SLC25A21Q9BQT8 299 aaPredicted RBP1.75□□□□□ -2.13
VPS41-213ENST00000485955 PLA2G12AQ9BZM1 189 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 IMUPQ9GZP8 106 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 FGF23Q9GZV9 251 aaPredicted RBP1.75□□□□□ -2.13
VPS41-213ENST00000485955 TAF9BQ9HBM6 251 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 OR5AC2Q9NZP5 309 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 ZNF230Q9UIE0 474 aaPredicted RBP1.75□□□□□ -2.13
VPS41-213ENST00000485955 TNFSF18Q9UNG2 199 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 C2orf16Q68DN1 1984 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 SCN10AQ9Y5Y9 1956 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 PLXNA4Q9HCM2 1894 aa1.75□□□□□ -2.13
VPS41-213ENST00000485955 TACC2O95359 2948 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 DCHS2Q6V1P9 2916 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 MYH2Q9UKX2 1941 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 IGLV1-50A0A075B6I6 118 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 IGHV1-45A0A0A0MS14 117 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 TRAV38-1A0A0B4J264 116 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 TRAV41A0A0B4J266 112 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 IZUMO1RA6ND01 250 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 ARRDC5A6NEK1 342 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 TLCD2A6NGC4 264 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 IGLL5B9A064 214 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 CORTO00230 105 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 RBFOX2O43251 390 aaKnown RBP eCLIP1.74□□□□□ -2.13
VPS41-213ENST00000485955 ZNF73O43830 326 aaPredicted RBP1.74□□□□□ -2.13
VPS41-213ENST00000485955 PGLYRP1O75594 196 aaPredicted RBP1.74□□□□□ -2.13
VPS41-213ENST00000485955 TRGC2P03986 189 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 INAFM2P0DMQ5 153 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 NTF3P20783 257 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 FKBP2P26885 142 aaKnown RBP1.74□□□□□ -2.13
VPS41-213ENST00000485955 PKIAP61925 76 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 HBA1P69905 142 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 ATP5G2Q06055 141 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 EIF3IQ13347 325 aaKnown RBP1.74□□□□□ -2.13
VPS41-213ENST00000485955 RTL8BQ17RB0 113 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 MORN3Q6PF18 240 aaPredicted RBP1.74□□□□□ -2.13
VPS41-213ENST00000485955 TEX261Q6UWH6 196 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 PDPNQ86YL7 162 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 C8orf59Q8N0T1 100 aaPredicted RBP1.74□□□□□ -2.13
VPS41-213ENST00000485955 ORMDL3Q8N138 153 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 OR11G2Q8NGC1 345 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 OR8A1Q8NGG7 326 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 OR51A4Q8NGJ6 313 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 FNDC9Q8TBE3 224 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 HIST1H2BAQ96A08 127 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 CMBLQ96DG6 245 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 C2orf50Q96LR7 162 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 CARD19Q96LW7 228 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 AP1S3Q96PC3 154 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 GPX7Q96SL4 187 aaPredicted RBP1.74□□□□□ -2.13
VPS41-213ENST00000485955 TM2D3Q9BRN9 247 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 PSMG3Q9BT73 122 aaPredicted RBP1.74□□□□□ -2.13
VPS41-213ENST00000485955 AICDAQ9GZX7 198 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 CST9LQ9H4G1 147 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 RNF122Q9H9V4 155 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 SND1-IT1Q9HBX3 110 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 TP73-AS1Q9UF72 201 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 ZFP30Q9Y2G7 519 aa1.74□□□□□ -2.13
VPS41-213ENST00000485955 NSD1Q96L73 2696 aaPredicted RBP1.73□□□□□ -2.13
VPS41-213ENST00000485955 ANKRD12Q6UB98 2062 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 IGLV3-12A0A075B6K2 115 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 IGHV3-72A0A0B4J1Y9 119 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 IGKV1D-43A0A0B4J1Z2 117 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 IGHV1OR15-9A0A0B4J2B8 117 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 LOC107984640A0A0U1RRK4 108 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 DHRS12A0PJE2 317 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 A8MUU9 505 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 J3QR89 54 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 UBE2L6O14933 153 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 PLA2G10O15496 165 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 SLC25A14O95258 325 aaPredicted RBP1.73□□□□□ -2.13
VPS41-213ENST00000485955 NCR2O95944 276 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 IGKV1-5P01602 117 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 IGHV3-11P01762 117 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 MAS1P04201 325 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 APODP05090 189 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 CD7P09564 240 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 ZNF705DP0CH99 300 aaPredicted RBP1.73□□□□□ -2.13
VPS41-213ENST00000485955 CSRP1P21291 193 aaKnown RBP1.73□□□□□ -2.13
VPS41-213ENST00000485955 FGF7P21781 194 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 HIST1H2BOP23527 126 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 HIST1H2BBP33778 126 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 GNG4P50150 75 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 NUDT2P50583 147 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 RAB5CP51148 216 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 INSL3P51460 131 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 HIST1H2BDP58876 126 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 FGF12P61328 243 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 COPZ1P61923 177 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 HIST1H2BCP62807 126 aa1.73□□□□□ -2.13
VPS41-213ENST00000485955 MEF2BQ02080 365 aaPredicted RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms