RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 TRAV6A0A075B6T7 132 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 TRAV5A0A0B4J249 113 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 FNDC10F2Z333 226 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 J3KRW8 73 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 K7EPK0 472 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 L7N2F9 121 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 SLC17A3O00476 420 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 PLA2G10O15496 165 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 COX7A2P2O60397 106 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 CST7O76096 145 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 TSPOP30536 169 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 TAS2R60P59551 318 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 VAMP2P63027 116 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 ZNF846Q147U1 533 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 OPCMLQ14982 345 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 ZNF546Q86UE3 836 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 C15orf53Q8NAA6 179 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 TMEM37Q8WXS4 190 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 C20orf85Q9H1P6 137 aa7.42□□□□□ -1.22
HMGN1-215ENST00000485550 NOP10Q9NPE3 64 aaKnown RBP7.42□□□□□ -1.22
HMGN1-215ENST00000485550 ZNF331Q9NQX6 463 aaPredicted RBP7.42□□□□□ -1.22
HMGN1-215ENST00000485550 DNAH5Q8TE73 4624 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 C5orf51A6NDU8 294 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 FAM24AA6NFZ4 105 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 PAX4O43316 350 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 LYRM1O43325 122 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 ATP5G1P05496 136 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 CDKN1BP46527 198 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 ATP5G3P48201 142 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 CAMLGP49069 296 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 CAV2P51636 162 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 PXDC1Q5TGL8 231 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 C10orf113Q5VZT2 155 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 MIC13Q5XKP0 118 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 LCN15Q6UWW0 184 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 BPIFA4PQ86YQ2 179 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 SEC22CQ9BRL7 303 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 GGACTQ9BVM4 153 aa7.41□□□□□ -1.22
HMGN1-215ENST00000485550 KRTAP4-8A0A0G2JLE6 195 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 CBY3A6NI87 242 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 H3BQ15 152 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 TCRBP04435 133 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 CXCL2P19875 107 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 OR5I1Q13606 314 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 NRARPQ7Z6K4 114 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 TMEM256Q8N2U0 113 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 OR10J6PQ8NGY7 276 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 C16orf74Q96GX8 76 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 SLC50A1Q9BRV3 221 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 DNAJC4Q9NNZ3 241 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 RNF24Q9Y225 148 aa7.4□□□□□ -1.22
HMGN1-215ENST00000485550 TIMM8BQ9Y5J9 83 aaPredicted RBP7.4□□□□□ -1.22
HMGN1-215ENST00000485550 FLG2Q5D862 2391 aaPredicted RBP7.4□□□□□ -1.23
HMGN1-215ENST00000485550 H7BYZ3 331 aa7.39□□□□□ -1.23
HMGN1-215ENST00000485550 S100A10P60903 97 aa7.39□□□□□ -1.23
HMGN1-215ENST00000485550 RAB31Q13636 194 aa7.39□□□□□ -1.23
HMGN1-215ENST00000485550 CNPY1Q3B7I2 92 aa7.39□□□□□ -1.23
HMGN1-215ENST00000485550 GFI1BQ5VTD9 330 aa7.39□□□□□ -1.23
HMGN1-215ENST00000485550 Q6ZRG5 221 aa7.39□□□□□ -1.23
HMGN1-215ENST00000485550 C12orf45Q8N5I9 185 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-215ENST00000485550 RNASE8Q8TDE3 154 aaKnown RBP7.39□□□□□ -1.23
HMGN1-215ENST00000485550 ZNF431Q8TF32 576 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-215ENST00000485550 RNF141Q8WVD5 230 aa7.39□□□□□ -1.23
HMGN1-215ENST00000485550 SAT2Q96F10 170 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-215ENST00000485550 UQCC1Q9NVA1 299 aa7.39□□□□□ -1.23
HMGN1-215ENST00000485550 TRAV12-3A0A0B4J271 114 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 A0A0J9YY99 117 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 GAGE12BA1L429 117 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 GAGE7O76087 117 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 GAGE12FP0CL80 117 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 GAGE12GP0CL81 117 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 GAGE12IP0CL82 117 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 CT45A10P0DMU9 189 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 IGLC2P0DOY2 106 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 CCL18P55774 89 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 BAXQ07812 192 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 CLINT1Q14677 625 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 ZNF493Q6ZR52 646 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 CCDC28AQ8IWP9 274 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 ZNRF2Q8NHG8 242 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 TMEM263Q8WUH6 116 aaKnown RBP7.38□□□□□ -1.23
HMGN1-215ENST00000485550 C2orf50Q96LR7 162 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 C11orf1Q9H5F2 150 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 NUDT15Q9NV35 164 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 ZNF586Q9NXT0 402 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 LINC00588Q9Y4M8 146 aa7.38□□□□□ -1.23
HMGN1-215ENST00000485550 NBDYA0A0U1RRE5 68 aa7.37□□□□□ -1.23
HMGN1-215ENST00000485550 UBE2L5PA0A1B0GUS4 154 aa7.37□□□□□ -1.23
HMGN1-215ENST00000485550 TMEM238LA0A1B0GVL6 79 aa7.37□□□□□ -1.23
HMGN1-215ENST00000485550 IGSF23A1L1A6 192 aa7.37□□□□□ -1.23
HMGN1-215ENST00000485550 PVALBP20472 110 aaPredicted RBP7.37□□□□□ -1.23
HMGN1-215ENST00000485550 FAM3BP58499 235 aaPredicted RBP7.37□□□□□ -1.23
HMGN1-215ENST00000485550 RAB32Q13637 225 aa7.37□□□□□ -1.23
HMGN1-215ENST00000485550 SSX7Q7RTT5 188 aa7.37□□□□□ -1.23
HMGN1-215ENST00000485550 SPATA12Q7Z6I5 190 aa7.37□□□□□ -1.23
HMGN1-215ENST00000485550 OR1L4Q8NGR5 311 aa7.37□□□□□ -1.23
HMGN1-215ENST00000485550 SLC39A9Q9NUM3 307 aa7.37□□□□□ -1.23
HMGN1-215ENST00000485550 WDR83OSQ9Y284 106 aa7.37□□□□□ -1.23
HMGN1-215ENST00000485550 PXMP4Q9Y6I8 212 aa7.37□□□□□ -1.23
HMGN1-215ENST00000485550 TRAV26-1A0A087WT03 109 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms