RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 C2orf83Q53S99 150 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 GFI1BQ5VTD9 330 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 LAIR2Q6ISS4 152 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 DHRS11Q6UWP2 260 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 CCDC190Q86UF4 302 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 C11orf72Q8NBR9 251 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 RNASEH2CQ8TDP1 164 aaKnown RBP3.41□□□□□ -1.86
PTPN4-210ENST00000485247 PCNPQ8WW12 178 aaKnown RBP3.41□□□□□ -1.86
PTPN4-210ENST00000485247 RRNAD1Q96FB5 475 aaKnown RBP3.41□□□□□ -1.86
PTPN4-210ENST00000485247 ST6GAL2Q96JF0 529 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 C20orf144Q9BQM9 153 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 FXYD6Q9H0Q3 95 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 MED4Q9NPJ6 270 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 RPH3ALQ9UNE2 315 aa3.41□□□□□ -1.86
PTPN4-210ENST00000485247 LSM2Q9Y333 95 aaKnown RBP3.41□□□□□ -1.86
PTPN4-210ENST00000485247 TRAV18A0A075B6X5 111 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 TRAV12-3A0A0B4J271 114 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 TRGV4A0A0C4DH28 118 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 A0A0D9SG52 128 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 A0A0J9YXV3 536 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 SNRPGP15A8MWD9 76 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 NDUFB4O95168 129 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 PMP2P02689 132 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 S100GP29377 79 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 PPT1P50897 306 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 TRAM1Q15629 374 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 Q8N976 141 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 OR1B1Q8NGR6 318 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 CYGBQ8WWM9 190 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 MRPL32Q9BYC8 188 aaKnown RBP3.4□□□□□ -1.87
PTPN4-210ENST00000485247 MRPL16Q9NX20 251 aaKnown RBP3.4□□□□□ -1.87
PTPN4-210ENST00000485247 KLF12Q9Y4X4 402 aa3.4□□□□□ -1.87
PTPN4-210ENST00000485247 IGKV1D-37A0A075B6S9 117 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 TRAV8-6A0A0B4J262 113 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 RNF222A6NCQ9 220 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 SPINK4O60575 86 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 SCGNO76038 276 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 CXCL3P19876 107 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 RAB3BP20337 219 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 MYL9P24844 172 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 HRH1P35367 487 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 KRTAP10-8P60410 259 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 SPCS3P61009 180 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 LAGE3Q14657 143 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 TRIM16LQ309B1 348 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 OR10J3Q5JRS4 329 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 ZNF680Q8NEM1 530 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 RPUSD4Q96CM3 377 aaKnown RBP3.39□□□□□ -1.87
PTPN4-210ENST00000485247 TXNDC17Q9BRA2 123 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 PYGO2Q9BRQ0 406 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 SLC25A31Q9H0C2 315 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 ACOT13Q9NPJ3 140 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 IFT46Q9NQC8 304 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 DIABLOQ9NR28 239 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 FKBP14Q9NWM8 211 aa3.39□□□□□ -1.87
PTPN4-210ENST00000485247 TRAV1-2A0A0B4J238 106 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 A0A0G2JRQ6 117 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 LOC100131303A0A0U1RQF7 123 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 CEBPZOSA8MTT3 80 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 VCYO14598 125 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 CIB2O75838 187 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 ORM1P02763 201 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 FABP1P07148 127 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 SFTA3P0C7M3 94 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 ORM2P19652 201 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 ZNF846Q147U1 533 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 FFAR4Q5NUL3 377 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 LPCAT3Q6P1A2 487 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 C10orf67Q8IYJ2 551 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 ZBTB8BQ8NAP8 495 aaPredicted RBP3.38□□□□□ -1.87
PTPN4-210ENST00000485247 NHLRC2Q8NBF2 726 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 OR4D5Q8NGN0 318 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 RNASE11Q8TAA1 199 aaKnown RBP3.38□□□□□ -1.87
PTPN4-210ENST00000485247 LRRC20Q8TCA0 184 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 ZNF431Q8TF32 576 aaPredicted RBP3.38□□□□□ -1.87
PTPN4-210ENST00000485247 VGLL1Q99990 258 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 PLCXD1Q9NUJ7 323 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 RHBDL2Q9NX52 303 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 TMEM56-RWDD3S4R434 201 aa3.38□□□□□ -1.87
PTPN4-210ENST00000485247 TRAV8-3A0A0A6YYJ7 113 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 LINC00854A0A1B0GVQ3 168 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 GABARAPH6UMI1 98 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 PANO1I0J062 215 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 GABARAPO95166 117 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 GNAO1P09471 354 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 TCL1AP56279 114 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 TSPAN5P62079 268 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 PAPPA-AS1Q5QFB9 102 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 STEAP1BQ6NZ63 245 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 WDR73Q6P4I2 378 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 PQLC2Q6ZP29 291 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 FAM219AQ8IW50 185 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 OR5H2Q8NGV7 314 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 ATP6V0E2Q8NHE4 81 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 GPR82Q96P67 336 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 TP53RKQ96S44 253 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 AUNIPQ9H7T9 357 aa3.37□□□□□ -1.87
PTPN4-210ENST00000485247 IGKV1OR2-108A0A075B7D4 117 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 CRYM-AS1A6NIL9 109 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 PRAC2D3DTV9 90 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms