RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 ST6GALNAC3Q8NDV1 305 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 WFDC5Q8TCV5 224 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 ZC2HC1AQ96GY0 325 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 NIPSNAP1Q9BPW8 284 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 OR51I1Q9H343 314 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 FBXL12Q9NXK8 326 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 NINQ8N4C6 2090 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 HELZP42694 1942 aaKnown RBP-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 CLASP1Q7Z460 1538 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 EHBP1L1Q8N3D4 1523 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 PAPPA2Q9BXP8 1791 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 ADCY9O60503 1353 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 NHSL1Q5SYE7 1610 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 PREX2Q70Z35 1606 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 RIMBP3Q9UFD9 1639 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 PLXNA1Q9UIW2 1896 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 NCOA2Q15596 1464 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 PXDNQ92626 1479 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 CDC42BPAQ5VT25 1732 aa-0.35□□□□□ -2.47
CCDC66-219ENST00000484441 AFDNP55196 1824 aaKnown RBP-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 TAF1LQ8IZX4 1826 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 DOCK11Q5JSL3 2073 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 ZC3H13Q5T200 1668 aaKnown RBP-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 CASZ1Q86V15 1759 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 A0A087X0T9 212 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 FAM236DA0A1B0GTK5 79 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 PQLC2LA1A4F0 135 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 FAM92AA1XBS5 289 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 DPRXA6NFQ7 191 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 OR2T8A6NH00 312 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 C5orf67F2Z3F1 127 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 H3BNG1 76 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 H7BYZ3 331 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 FAAHO00519 579 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 APOEP02649 317 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 FAM236CP0DP71 79 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 TFAMQ00059 246 aaKnown RBP-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 SPAG11BQ08648 103 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 KLKP1Q107X0 134 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 IMPG1Q17R60 797 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 C6orf52Q5T4I8 152 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 LINC00575Q6W349 94 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 OR13D1Q8NGV5 346 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 DNAJC9Q8WXX5 260 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 TOMM6Q96B49 74 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 Q96NJ1 140 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 TLNRD1Q9H1K6 362 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 APLNQ9ULZ1 77 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 RAPGEF6Q8TEU7 1601 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 RNF17Q9BXT8 1623 aaKnown RBP-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 ERVK-7P63135 1459 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 TEX14Q8IWB6 1497 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 CEP164Q9UPV0 1460 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 WDR7Q9Y4E6 1490 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 PLXNC1O60486 1568 aa-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.36□□□□□ -2.47
CCDC66-219ENST00000484441 CROCC2H7BZ55 1655 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 PLCH1Q4KWH8 1693 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 QRICH2Q9H0J4 1663 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 HEATR1Q9H583 2144 aaKnown RBP-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 UHRF1BP1Q6BDS2 1440 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 PRG4Q92954 1404 aaPredicted RBP-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 ADGRL3Q9HAR2 1447 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 OBSL1O75147 1896 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 MYO5AQ9Y4I1 1855 aaKnown RBP-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 CUX1P39880 1505 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 USP32Q8NFA0 1604 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 TRBV20-1A0A075B6N2 111 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 A0A087WVE0 104 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 TRBV6-4A0A1B0GX49 114 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 LOC730098B7Z3J9 87 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 CCL16O15467 120 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 SSSCA1O60232 199 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 CST7O76096 145 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 DNAL4O96015 105 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 IFNA10P01566 189 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 C1QBP02746 253 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 COX6B1P14854 86 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 RPS12P25398 132 aaKnown RBP-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 SRIP30626 198 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 NKX2-5P52952 324 aaPredicted RBP-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 DEFB110Q30KQ9 67 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 CLPSL2Q6UWE3 100 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 Q6ZRX8 168 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 VMO1Q7Z5L0 202 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 Q86TA4 180 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 PRR15Q8IV56 129 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 PDZD9Q8IXQ8 264 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 FAM213BQ8TBF2 198 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 UPF3BQ9BZI7 483 aaKnown RBP-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 XPNPEP1Q9NQW7 623 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 SLC39A9Q9NUM3 307 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 UQCC1Q9NVA1 299 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 NHP2Q9NX24 153 aaKnown RBP-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 CRIPTQ9P021 101 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 FBXO5Q9UKT4 447 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 ERGIC3Q9Y282 383 aa-0.37□□□□□ -2.47
CCDC66-219ENST00000484441 PLXNB2O15031 1838 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms