RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 ADORA2A-AS1P86434 159 aa15.4■□□□□ 0.06
LIMS2-215ENST00000484252 NDPQ00604 133 aa15.4■□□□□ 0.06
LIMS2-215ENST00000484252 BCL6BQ8N143 479 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-215ENST00000484252 ASCL2Q99929 193 aa15.4■□□□□ 0.06
LIMS2-215ENST00000484252 TLN1Q9Y490 2541 aaKnown RBP15.39■□□□□ 0.05
LIMS2-215ENST00000484252 A0A1W2PRD5 423 aa15.39■□□□□ 0.05
LIMS2-215ENST00000484252 A0A1W2PRF3 423 aa15.39■□□□□ 0.05
LIMS2-215ENST00000484252 A0A1W2PRM7 423 aa15.39■□□□□ 0.05
LIMS2-215ENST00000484252 MPV17L2Q567V2 206 aa15.39■□□□□ 0.05
LIMS2-215ENST00000484252 PRSS3P2Q8NHM4 247 aa15.39■□□□□ 0.05
LIMS2-215ENST00000484252 TPPP3Q9BW30 176 aa15.39■□□□□ 0.05
LIMS2-215ENST00000484252 SH2D1AO60880 128 aa15.39■□□□□ 0.05
LIMS2-215ENST00000484252 LINC01545Q5VT33 79 aa15.39■□□□□ 0.05
LIMS2-215ENST00000484252 OR10AG1Q8NH19 301 aa15.39■□□□□ 0.05
LIMS2-215ENST00000484252 RABAC1Q9UI14 185 aa15.39■□□□□ 0.05
LIMS2-215ENST00000484252 hDV102S1A0JD36 115 aa15.38■□□□□ 0.05
LIMS2-215ENST00000484252 UCNP55089 124 aa15.38■□□□□ 0.05
LIMS2-215ENST00000484252 KLRB1Q12918 225 aa15.38■□□□□ 0.05
LIMS2-215ENST00000484252 BVES-AS1Q5T3Y7 98 aa15.38■□□□□ 0.05
LIMS2-215ENST00000484252 SLC25A34Q6PIV7 304 aa15.38■□□□□ 0.05
LIMS2-215ENST00000484252 CHTOPQ9Y3Y2 248 aaKnown RBP15.38■□□□□ 0.05
LIMS2-215ENST00000484252 U3KQK5 164 aa15.38■□□□□ 0.05
LIMS2-215ENST00000484252 CD5LO43866 347 aa15.37■□□□□ 0.05
LIMS2-215ENST00000484252 TMEM11P17152 192 aa15.37■□□□□ 0.05
LIMS2-215ENST00000484252 LYZL1Q6UWQ5 148 aa15.37■□□□□ 0.05
LIMS2-215ENST00000484252 NUDT3O95989 172 aa15.37■□□□□ 0.05
LIMS2-215ENST00000484252 CDSNQ15517 529 aa15.37■□□□□ 0.05
LIMS2-215ENST00000484252 DYNAPQ8N1N2 210 aa15.37■□□□□ 0.05
LIMS2-215ENST00000484252 ZNF747Q9BV97 191 aa15.37■□□□□ 0.05
LIMS2-215ENST00000484252 CTSGP08311 255 aa15.36■□□□□ 0.05
LIMS2-215ENST00000484252 PRR25Q96S07 402 aa15.36■□□□□ 0.05
LIMS2-215ENST00000484252 SCRT2Q9NQ03 307 aa15.36■□□□□ 0.05
LIMS2-215ENST00000484252 OR2T8A6NH00 312 aa15.36■□□□□ 0.05
LIMS2-215ENST00000484252 BMI1P35226 326 aa15.36■□□□□ 0.05
LIMS2-215ENST00000484252 FAM104BQ5XKR9 115 aa15.36■□□□□ 0.05
LIMS2-215ENST00000484252 MSRB2Q9Y3D2 182 aa15.36■□□□□ 0.05
LIMS2-215ENST00000484252 IGKV2-40A0A087WW87 121 aaPredicted RBP15.35■□□□□ 0.05
LIMS2-215ENST00000484252 IGKV2D-40P01614 121 aaPredicted RBP15.35■□□□□ 0.05
LIMS2-215ENST00000484252 SRSF2Q01130 221 aaKnown RBP15.35■□□□□ 0.05
LIMS2-215ENST00000484252 DTX2Q86UW9 622 aa15.35■□□□□ 0.05
LIMS2-215ENST00000484252 SPOCK3Q9BQ16 436 aa15.35■□□□□ 0.05
LIMS2-215ENST00000484252 PEF1Q9UBV8 284 aaKnown RBP15.35■□□□□ 0.05
LIMS2-215ENST00000484252 IGHV7-81A0A0B4J1V7 117 aa15.34■□□□□ 0.05
LIMS2-215ENST00000484252 GAGE12BA1L429 117 aa15.34■□□□□ 0.05
LIMS2-215ENST00000484252 CIDEAO60543 219 aa15.34■□□□□ 0.05
LIMS2-215ENST00000484252 EGR2P11161 476 aaPredicted RBP15.34■□□□□ 0.05
LIMS2-215ENST00000484252 AMMECR1LQ6DCA0 310 aa15.34■□□□□ 0.05
LIMS2-215ENST00000484252 ORMDL3Q8N138 153 aa15.34■□□□□ 0.05
LIMS2-215ENST00000484252 IGHV3-23P01764 117 aa15.34■□□□□ 0.05
LIMS2-215ENST00000484252 FAM106CPP0CH98 169 aa15.34■□□□□ 0.05
LIMS2-215ENST00000484252 ABCA1O95477 2261 aa15.33■□□□□ 0.04
LIMS2-215ENST00000484252 D6R8Y8 96 aa15.33■□□□□ 0.04
LIMS2-215ENST00000484252 PRELID3AQ96N28 172 aa15.33■□□□□ 0.04
LIMS2-215ENST00000484252 SMAD5-AS1Q9Y6J3 95 aa15.33■□□□□ 0.04
LIMS2-215ENST00000484252 TMSB15BA0A087X1C1 80 aa15.32■□□□□ 0.04
LIMS2-215ENST00000484252 PRB4P10163 310 aaPredicted RBP15.32■□□□□ 0.04
LIMS2-215ENST00000484252 RAB9AP51151 201 aa15.32■□□□□ 0.04
LIMS2-215ENST00000484252 KLK9Q2XQG4 91 aa15.32■□□□□ 0.04
LIMS2-215ENST00000484252 Q8N9W7 124 aa15.32■□□□□ 0.04
LIMS2-215ENST00000484252 FAM110DQ8TAY7 271 aaPredicted RBP15.32■□□□□ 0.04
LIMS2-215ENST00000484252 PMCHL2Q9BQD1 86 aa15.32■□□□□ 0.04
LIMS2-215ENST00000484252 SIRPDQ9H106 197 aa15.32■□□□□ 0.04
LIMS2-215ENST00000484252 KLK9Q9UKQ9 250 aa15.32■□□□□ 0.04
LIMS2-215ENST00000484252 TMEM213A2RRL7 107 aa15.32■□□□□ 0.04
LIMS2-215ENST00000484252 IFI27P40305 119 aaPredicted RBP15.32■□□□□ 0.04
LIMS2-215ENST00000484252 HIST1H1AQ02539 215 aaPredicted RBP15.32■□□□□ 0.04
LIMS2-215ENST00000484252 SIGLEC8Q9NYZ4 499 aa15.32■□□□□ 0.04
LIMS2-215ENST00000484252 TMEM238C9JI98 176 aa15.31■□□□□ 0.04
LIMS2-215ENST00000484252 H0Y8G0 127 aa15.31■□□□□ 0.04
LIMS2-215ENST00000484252 AMN1Q8IY45 258 aa15.31■□□□□ 0.04
LIMS2-215ENST00000484252 FER1L6-AS1Q8NA97 138 aa15.31■□□□□ 0.04
LIMS2-215ENST00000484252 MUC21A0A0G2JKD1 596 aa15.31■□□□□ 0.04
LIMS2-215ENST00000484252 MUC21A0A140T8X8 626 aa15.31■□□□□ 0.04
LIMS2-215ENST00000484252 ZFP36P26651 326 aaKnown RBP15.31■□□□□ 0.04
LIMS2-215ENST00000484252 MUC21Q5SSG8 566 aa15.31■□□□□ 0.04
LIMS2-215ENST00000484252 TIMM8BQ9Y5J9 83 aaPredicted RBP15.31■□□□□ 0.04
LIMS2-215ENST00000484252 ANKHD1Q8IWZ3 2542 aaKnown RBP15.3■□□□□ 0.04
LIMS2-215ENST00000484252 A0A087X0K7 114 aa15.3■□□□□ 0.04
LIMS2-215ENST00000484252 MRPL51Q4U2R6 128 aaKnown RBP15.3■□□□□ 0.04
LIMS2-215ENST00000484252 DPF1Q92782 380 aa15.3■□□□□ 0.04
LIMS2-215ENST00000484252 IGHG4P01861 327 aa15.29■□□□□ 0.04
LIMS2-215ENST00000484252 IGLC6P0CF74 106 aa15.29■□□□□ 0.04
LIMS2-215ENST00000484252 ZNF502Q8TBZ5 544 aa15.29■□□□□ 0.04
LIMS2-215ENST00000484252 VGLL1Q99990 258 aa15.29■□□□□ 0.04
LIMS2-215ENST00000484252 COL25A1Q9BXS0 654 aaPredicted RBP15.29■□□□□ 0.04
LIMS2-215ENST00000484252 UBE2E1P51965 193 aa15.29■□□□□ 0.04
LIMS2-215ENST00000484252 MCRIP2Q9BUT9 160 aaKnown RBP15.29■□□□□ 0.04
LIMS2-215ENST00000484252 A0A096LNJ9 63 aa15.28■□□□□ 0.04
LIMS2-215ENST00000484252 COX8AP10176 69 aa15.28■□□□□ 0.04
LIMS2-215ENST00000484252 RAXQ9Y2V3 346 aa15.28■□□□□ 0.04
LIMS2-215ENST00000484252 LOC389332A0A1B0GUA5 103 aa15.28■□□□□ 0.04
LIMS2-215ENST00000484252 ZNF80P51504 273 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-215ENST00000484252 SEC11AP67812 179 aa15.28■□□□□ 0.04
LIMS2-215ENST00000484252 TWIST1Q15672 202 aa15.28■□□□□ 0.04
LIMS2-215ENST00000484252 GTF2H5Q6ZYL4 71 aa15.28■□□□□ 0.04
LIMS2-215ENST00000484252 Q8TAT8 98 aa15.28■□□□□ 0.04
LIMS2-215ENST00000484252 ZZEF1O43149 2961 aa15.27■□□□□ 0.04
LIMS2-215ENST00000484252 RBAKDNA6NC62 111 aa15.27■□□□□ 0.03
LIMS2-215ENST00000484252 C15orf32Q32M92 178 aa15.27■□□□□ 0.03
LIMS2-215ENST00000484252 LGALS9BQ3B8N2 356 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms