RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 DIRAS2Q96HU8 199 aa8.69□□□□□ -1.02
UBR4-213ENST00000483922 STRAPQ9Y3F4 350 aaKnown RBP8.69□□□□□ -1.02
UBR4-213ENST00000483922 SMCO3A2RU48 225 aa8.68□□□□□ -1.02
UBR4-213ENST00000483922 K7EPK0 472 aa8.68□□□□□ -1.02
UBR4-213ENST00000483922 SPINK4O60575 86 aa8.68□□□□□ -1.02
UBR4-213ENST00000483922 IGLC2P0DOY2 106 aa8.68□□□□□ -1.02
UBR4-213ENST00000483922 SLC38A11Q08AI6 406 aa8.68□□□□□ -1.02
UBR4-213ENST00000483922 ARL16Q0P5N6 197 aa8.68□□□□□ -1.02
UBR4-213ENST00000483922 PPP1R1AQ13522 171 aa8.68□□□□□ -1.02
UBR4-213ENST00000483922 FHL2Q14192 279 aa8.68□□□□□ -1.02
UBR4-213ENST00000483922 LINC00305Q7Z4B0 112 aa8.68□□□□□ -1.02
UBR4-213ENST00000483922 PYGO2Q9BRQ0 406 aa8.68□□□□□ -1.02
UBR4-213ENST00000483922 TP53TG3Q9ULZ0 132 aa8.68□□□□□ -1.02
UBR4-213ENST00000483922 FUT9Q9Y231 359 aa8.68□□□□□ -1.02
UBR4-213ENST00000483922 TRGV2A0A075B6R0 118 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 TRGV1A0A0A0MS02 117 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 TRAV5A0A0B4J249 113 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 LRCOL1A6NCL2 159 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 NPIPB6E9PJ23 425 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 J3QL48 77 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 PAX4O43316 350 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 PRAF2O60831 178 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 SFT2D2O95562 160 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 IGHV3-53P01767 116 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 CXCL2P19875 107 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 VAMP1P23763 118 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 S100A7P31151 101 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 CRYBA4P53673 196 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 SELENOTP62341 195 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 CD300CQ08708 224 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 ERCC8Q13216 396 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 C4orf46Q504U0 113 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 LCN15Q6UWW0 184 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 Q6ZSN1 163 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 WFDC10BQ8IUB3 73 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 FAM19A4Q96LR4 140 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 NPVFQ9HCQ7 196 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 PSENENQ9NZ42 101 aa8.67□□□□□ -1.02
UBR4-213ENST00000483922 OPCMLQ14982 345 aa8.66□□□□□ -1.02
UBR4-213ENST00000483922 TMEM14EPQ6UXP3 125 aa8.66□□□□□ -1.02
UBR4-213ENST00000483922 NFE4Q86UQ8 179 aa8.66□□□□□ -1.02
UBR4-213ENST00000483922 ODF3Q96PU9 254 aa8.66□□□□□ -1.02
UBR4-213ENST00000483922 SLC50A1Q9BRV3 221 aa8.66□□□□□ -1.02
UBR4-213ENST00000483922 ICOSQ9Y6W8 199 aa8.66□□□□□ -1.02
UBR4-213ENST00000483922 KRTAP29-1A8MX34 341 aaPredicted RBP8.65□□□□□ -1.02
UBR4-213ENST00000483922 METTL15P1P0C7V9 234 aa8.65□□□□□ -1.02
UBR4-213ENST00000483922 TNFSF8P32971 234 aa8.65□□□□□ -1.02
UBR4-213ENST00000483922 BTN1A1Q13410 526 aa8.65□□□□□ -1.02
UBR4-213ENST00000483922 ANXA2RQ3ZCQ2 193 aa8.65□□□□□ -1.02
UBR4-213ENST00000483922 DYNC2LI1Q8TCX1 351 aa8.65□□□□□ -1.02
UBR4-213ENST00000483922 TRIM63Q969Q1 353 aa8.65□□□□□ -1.02
UBR4-213ENST00000483922 ST6GAL2Q96JF0 529 aa8.65□□□□□ -1.02
UBR4-213ENST00000483922 LINC00467Q9BRT7 94 aa8.65□□□□□ -1.02
UBR4-213ENST00000483922 MSRB1Q9NZV6 116 aa8.65□□□□□ -1.02
UBR4-213ENST00000483922 C7orf71A4D174 169 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 KLLNB2CW77 178 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 M0R3E3 92 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 AGPAT2O15120 278 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 LEPP41159 167 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 TCL1AP56279 114 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 PRR9Q5T870 116 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 BPIFA4PQ86YQ2 179 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 SMIM8Q96KF7 97 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 C8orf49Q96NF6 230 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 MGST2Q99735 147 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 TMEM70Q9BUB7 260 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 AGPAT4-IT1Q9H0P7 198 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 MRPL16Q9NX20 251 aaKnown RBP8.64□□□□□ -1.03
UBR4-213ENST00000483922 RSL24D1Q9UHA3 163 aaKnown RBP8.64□□□□□ -1.03
UBR4-213ENST00000483922 HHLA3Q9XRX5 114 aa8.64□□□□□ -1.03
UBR4-213ENST00000483922 SSSCA1O60232 199 aa8.63□□□□□ -1.03
UBR4-213ENST00000483922 EIF4E3Q8N5X7 224 aaKnown RBP8.63□□□□□ -1.03
UBR4-213ENST00000483922 CCDC59Q9P031 241 aaKnown RBP8.63□□□□□ -1.03
UBR4-213ENST00000483922 PRO0255Q9UI72 69 aa8.63□□□□□ -1.03
UBR4-213ENST00000483922 PXMP4Q9Y6I8 212 aa8.63□□□□□ -1.03
UBR4-213ENST00000483922 LY96Q9Y6Y9 160 aa8.63□□□□□ -1.03
UBR4-213ENST00000483922 PKHD1L1Q86WI1 4243 aa8.62□□□□□ -1.03
UBR4-213ENST00000483922 FNDC10F2Z333 226 aa8.62□□□□□ -1.03
UBR4-213ENST00000483922 K7EQD1 137 aa8.62□□□□□ -1.03
UBR4-213ENST00000483922 NDUFB4O95168 129 aa8.62□□□□□ -1.03
UBR4-213ENST00000483922 SLC25A5P05141 298 aaKnown RBP8.62□□□□□ -1.03
UBR4-213ENST00000483922 RNASE4P34096 147 aaKnown RBP8.62□□□□□ -1.03
UBR4-213ENST00000483922 NEGR1Q7Z3B1 354 aa8.62□□□□□ -1.03
UBR4-213ENST00000483922 ZNF680Q8NEM1 530 aa8.62□□□□□ -1.03
UBR4-213ENST00000483922 MRPL32Q9BYC8 188 aaKnown RBP8.62□□□□□ -1.03
UBR4-213ENST00000483922 SLIRPQ9GZT3 109 aaKnown RBP8.62□□□□□ -1.03
UBR4-213ENST00000483922 RABL2AQ9UBK7 228 aaPredicted RBP8.62□□□□□ -1.03
UBR4-213ENST00000483922 TRAV9-2A0A087WT02 112 aa8.61□□□□□ -1.03
UBR4-213ENST00000483922 IGLV5-52A0A0A0MRZ9 124 aa8.61□□□□□ -1.03
UBR4-213ENST00000483922 PIGBOS1A0A0B4J2F0 54 aa8.61□□□□□ -1.03
UBR4-213ENST00000483922 C9orf170A2RU37 121 aa8.61□□□□□ -1.03
UBR4-213ENST00000483922 FABP12A6NFH5 140 aa8.61□□□□□ -1.03
UBR4-213ENST00000483922 E5RGE8 158 aa8.61□□□□□ -1.03
UBR4-213ENST00000483922 GOSR2O14653 212 aa8.61□□□□□ -1.03
UBR4-213ENST00000483922 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
UBR4-213ENST00000483922 PXDC1Q5TGL8 231 aa8.61□□□□□ -1.03
UBR4-213ENST00000483922 ZFAND2AQ8N6M9 145 aa8.61□□□□□ -1.03
UBR4-213ENST00000483922 COX7A2P2O60397 106 aa8.6□□□□□ -1.03
UBR4-213ENST00000483922 SFTA3P0C7M3 94 aa8.6□□□□□ -1.03
UBR4-213ENST00000483922 CRISP2P16562 243 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms