RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 CR1LQ2VPA4 569 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 PRSS46E5RG02 174 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 CFC1BP0CG36 223 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 CFC1P0CG37 223 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 PSMB8P28062 276 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 FGFBP3Q8TAT2 258 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 ITLN2Q8WWU7 325 aaPredicted RBP8.37□□□□□ -1.07
COL12A1-207ENST00000483888 F6UB75 175 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 WFDC9Q8NEX5 89 aa8.37□□□□□ -1.07
COL12A1-207ENST00000483888 J3QW42 95 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 CELA2AP08217 269 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 M0R1W7 72 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 H0YJW9 148 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 SMIM10L1P0DMW3 83 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 SMIM10Q96HG1 83 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 ZNF492Q9P255 531 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 TRBV25-1A0A075B6N4 114 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 SORL1Q92673 2214 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 TMEM75Q8N9X5 138 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 C16orf97H3BN30 126 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 SIGLEC15Q6ZMC9 328 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.36□□□□□ -1.07
COL12A1-207ENST00000483888 EIF4EBP2Q13542 120 aaPredicted RBP8.36□□□□□ -1.07
COL12A1-207ENST00000483888 C1orf195Q5TG92 126 aa8.36□□□□□ -1.07
COL12A1-207ENST00000483888 M0QXV9 152 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 FXYD2P54710 66 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 TRGV11A0A075B6L2 103 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 TRAV12-2A0A075B6T6 113 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 hADV29S1A0JD25 119 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 UQCRQO14949 82 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 ZNF493Q6ZR52 646 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 SPANXB1Q9NS25 103 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-207ENST00000483888 ASPHD1Q5U4P2 390 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 C6orf226Q5I0X4 101 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 STPG1Q5TH74 334 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 PLCE1Q9P212 2302 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 C8orf49Q96NF6 230 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 AGRNO00468 2067 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 A0A087WX48 190 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 TRAV13-2A0A0B4J235 113 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 TMEM167AQ8TBQ9 72 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 NUP210Q8TEM1 1887 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-207ENST00000483888 IGHV5-10-1A0A0J9YXX1 117 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 FAM166AQ6J272 317 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 C2orf66Q6UXQ4 117 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 SSC4DQ8WTU2 575 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 A0A0G2JRQ6 117 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 QRFPP83859 136 aa8.35□□□□□ -1.07
COL12A1-207ENST00000483888 CRLF1O75462 422 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 CRYGBP07316 175 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 LY6EQ16553 131 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.34□□□□□ -1.07
COL12A1-207ENST00000483888 ZNF747Q9BV97 191 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 TRAV3A0A0B4J244 114 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 F8WEM9 126 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 IGHV1-45A0A0A0MS14 117 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 LYPD1Q8N2G4 141 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 C3orf22Q8N5N4 141 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 LTBP4Q8N2S1 1624 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 EFEMP2O95967 443 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 FAM90A1Q86YD7 464 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 ZNF106Q9H2Y7 1883 aaKnown RBP8.34□□□□□ -1.07
COL12A1-207ENST00000483888 J3QQQ9 107 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 K7EN84 100 aa8.34□□□□□ -1.07
COL12A1-207ENST00000483888 NLRC5Q86WI3 1866 aa8.33□□□□□ -1.08
COL12A1-207ENST00000483888 HERVK_113P63121 156 aa8.33□□□□□ -1.08
COL12A1-207ENST00000483888 A0A087WWL8 130 aa8.33□□□□□ -1.08
COL12A1-207ENST00000483888 OVOL1O14753 267 aa8.33□□□□□ -1.08
COL12A1-207ENST00000483888 BAALCQ8WXS3 180 aa8.33□□□□□ -1.08
COL12A1-207ENST00000483888 PLA2G2FQ9BZM2 168 aa8.33□□□□□ -1.08
COL12A1-207ENST00000483888 SPAARA0A1B0GVQ0 90 aa8.33□□□□□ -1.08
COL12A1-207ENST00000483888 C1orf159Q96HA4 380 aa8.33□□□□□ -1.08
COL12A1-207ENST00000483888 DAD1P61803 113 aa8.33□□□□□ -1.08
COL12A1-207ENST00000483888 TRAV25A0A0B4J276 109 aa8.33□□□□□ -1.08
COL12A1-207ENST00000483888 C20orf78Q9BR46 151 aa8.33□□□□□ -1.08
COL12A1-207ENST00000483888 TRAV26-2A0A0B4J265 109 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 FAM240AA0A1B0GVK7 77 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 CLPSL1A2RUU4 121 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 Q6ZS52 159 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 FAM231DQ6ZW35 169 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 LINC00312Q9Y6C7 94 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 LYPD3O95274 346 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 Q6ZRM9 215 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 ORMDL1Q9P0S3 153 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 NDPQ00604 133 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 TMEM92Q6UXU6 159 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 EFNA4P52798 201 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 NDUFA12Q9UI09 145 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 MED13Q9UHV7 2174 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 FAM201AQ5SY85 155 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 LINC01545Q5VT33 79 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 ICOSQ9Y6W8 199 aa8.32□□□□□ -1.08
COL12A1-207ENST00000483888 IGKV1-12A0A0C4DH73 117 aa8.31□□□□□ -1.08
COL12A1-207ENST00000483888 IGKV1D-12P01611 117 aa8.31□□□□□ -1.08
COL12A1-207ENST00000483888 TFF1P04155 84 aa8.31□□□□□ -1.08
COL12A1-207ENST00000483888 ZNF837Q96EG3 531 aaPredicted RBP8.31□□□□□ -1.08
COL12A1-207ENST00000483888 C20orf173Q96LM9 149 aa8.31□□□□□ -1.08
COL12A1-207ENST00000483888 IGKV1-27A0A075B6S5 117 aa8.31□□□□□ -1.08
COL12A1-207ENST00000483888 SRRM4A7MD48 611 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms