RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 SHANK2-AS3Q9BTD1 123 aa13.26□□□□□ -0.29
MRPL28-210ENST00000483764 SLC25A39Q9BZJ4 359 aaPredicted RBP13.26□□□□□ -0.29
MRPL28-210ENST00000483764 SERTM2A0A1B0GWG4 89 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 FAM231BA6NCW3 169 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 FBLL1A6NHQ2 334 aaKnown RBP13.25□□□□□ -0.29
MRPL28-210ENST00000483764 TSTD3H0UI37 97 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 K7EQM0 130 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 CTSGP08311 255 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 CRISP2P16562 243 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 GPR183P32249 361 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 PKIAP61925 76 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 SRSF2Q01130 221 aaKnown RBP13.25□□□□□ -0.29
MRPL28-210ENST00000483764 PDE6HQ13956 83 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 USF2Q15853 346 aaPredicted RBP13.25□□□□□ -0.29
MRPL28-210ENST00000483764 OR10J3Q5JRS4 329 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 CLEC19AQ6UXS0 136 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 RNF152Q8N8N0 203 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 OR4F17Q8NGA8 305 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 NAT8BQ9UHF3 227 aa13.25□□□□□ -0.29
MRPL28-210ENST00000483764 SNURFLB1AK76 121 aa13.24□□□□□ -0.29
MRPL28-210ENST00000483764 IGHV3-11P01762 117 aa13.24□□□□□ -0.29
MRPL28-210ENST00000483764 RPLP1P05386 114 aaKnown RBP13.24□□□□□ -0.29
MRPL28-210ENST00000483764 ADMP35318 185 aa13.24□□□□□ -0.29
MRPL28-210ENST00000483764 LYZP61626 148 aa13.24□□□□□ -0.29
MRPL28-210ENST00000483764 IQCJQ1A5X6 159 aa13.24□□□□□ -0.29
MRPL28-210ENST00000483764 ZNF600Q6ZNG1 722 aa13.24□□□□□ -0.29
MRPL28-210ENST00000483764 CMTM2Q8TAZ6 248 aa13.24□□□□□ -0.29
MRPL28-210ENST00000483764 GFRA4Q9GZZ7 299 aa13.24□□□□□ -0.29
MRPL28-210ENST00000483764 Q9H3A6 140 aa13.24□□□□□ -0.29
MRPL28-210ENST00000483764 ZNF331Q9NQX6 463 aaPredicted RBP13.24□□□□□ -0.29
MRPL28-210ENST00000483764 WI2-2373I1.2A0A1W2PRP0 233 aa13.23□□□□□ -0.29
MRPL28-210ENST00000483764 H3BRN7 92 aa13.23□□□□□ -0.29
MRPL28-210ENST00000483764 TCRAP04437 139 aa13.23□□□□□ -0.29
MRPL28-210ENST00000483764 ZNF491Q8N8L2 437 aa13.23□□□□□ -0.29
MRPL28-210ENST00000483764 OR4B1Q8NGF8 309 aa13.23□□□□□ -0.29
MRPL28-210ENST00000483764 MYOZ3Q8TDC0 251 aa13.23□□□□□ -0.29
MRPL28-210ENST00000483764 TSKUQ8WUA8 353 aa13.23□□□□□ -0.29
MRPL28-210ENST00000483764 RNASE7Q9H1E1 156 aaKnown RBP13.23□□□□□ -0.29
MRPL28-210ENST00000483764 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.23□□□□□ -0.29
MRPL28-210ENST00000483764 LTAP01374 205 aa13.23□□□□□ -0.29
MRPL28-210ENST00000483764 OR4X2Q8NGF9 303 aa13.23□□□□□ -0.29
MRPL28-210ENST00000483764 RNF125Q96EQ8 232 aa13.23□□□□□ -0.29
MRPL28-210ENST00000483764 MLST8Q9BVC4 326 aa13.23□□□□□ -0.29
MRPL28-210ENST00000483764 NIPBLQ6KC79 2804 aaeCLIP13.22□□□□□ -0.29
MRPL28-210ENST00000483764 A8MWL6 223 aa13.22□□□□□ -0.29
MRPL28-210ENST00000483764 CBLN1P23435 193 aa13.22□□□□□ -0.29
MRPL28-210ENST00000483764 FAM162BQ5T6X4 162 aa13.22□□□□□ -0.29
MRPL28-210ENST00000483764 BLNKQ8WV28 456 aa13.22□□□□□ -0.29
MRPL28-210ENST00000483764 TEP1Q99973 2627 aaKnown RBP13.22□□□□□ -0.29
MRPL28-210ENST00000483764 CLPSL1A2RUU4 121 aa13.21□□□□□ -0.29
MRPL28-210ENST00000483764 GZMBP10144 247 aa13.21□□□□□ -0.29
MRPL28-210ENST00000483764 TMEM136Q6ZRR5 245 aa13.21□□□□□ -0.29
MRPL28-210ENST00000483764 NUDT10Q8NFP7 164 aa13.21□□□□□ -0.29
MRPL28-210ENST00000483764 NUDT11Q96G61 164 aa13.21□□□□□ -0.29
MRPL28-210ENST00000483764 UBE2E2Q96LR5 201 aa13.21□□□□□ -0.29
MRPL28-210ENST00000483764 ZFP30Q9Y2G7 519 aa13.21□□□□□ -0.29
MRPL28-210ENST00000483764 RNF114Q9Y508 228 aa13.21□□□□□ -0.29
MRPL28-210ENST00000483764 ARL3P36405 182 aa13.2□□□□□ -0.3
MRPL28-210ENST00000483764 TCTEX1D4Q5JR98 221 aa13.2□□□□□ -0.3
MRPL28-210ENST00000483764 FAM209BQ5JX69 171 aa13.2□□□□□ -0.3
MRPL28-210ENST00000483764 TMEM75Q8N9X5 138 aa13.2□□□□□ -0.3
MRPL28-210ENST00000483764 DAZAP1Q96EP5 407 aaKnown RBP13.2□□□□□ -0.3
MRPL28-210ENST00000483764 RPP21Q9H633 154 aaKnown RBP13.2□□□□□ -0.3
MRPL28-210ENST00000483764 GNB4Q9HAV0 340 aa13.2□□□□□ -0.3
MRPL28-210ENST00000483764 TRBV19A0A075B6N1 114 aa13.19□□□□□ -0.3
MRPL28-210ENST00000483764 LINC00587B1AMM8 73 aa13.19□□□□□ -0.3
MRPL28-210ENST00000483764 HAX1O00165 279 aa13.19□□□□□ -0.3
MRPL28-210ENST00000483764 TRBV12-3P01733 135 aa13.19□□□□□ -0.3
MRPL28-210ENST00000483764 DMRTA1Q5VZB9 504 aa13.19□□□□□ -0.3
MRPL28-210ENST00000483764 PEF1Q9UBV8 284 aaKnown RBP13.19□□□□□ -0.3
MRPL28-210ENST00000483764 IGHV3-35A0A0C4DH35 117 aa13.18□□□□□ -0.3
MRPL28-210ENST00000483764 ZNF253O75346 499 aa13.18□□□□□ -0.3
MRPL28-210ENST00000483764 IGLC2P0DOY2 106 aa13.18□□□□□ -0.3
MRPL28-210ENST00000483764 PROK1P58294 105 aa13.18□□□□□ -0.3
MRPL28-210ENST00000483764 PSG9Q00887 426 aa13.18□□□□□ -0.3
MRPL28-210ENST00000483764 RELQ04864 619 aaPredicted RBP13.18□□□□□ -0.3
MRPL28-210ENST00000483764 BAGE3Q86Y29 109 aa13.18□□□□□ -0.3
MRPL28-210ENST00000483764 C19orf71A6NCJ1 209 aa13.18□□□□□ -0.3
MRPL28-210ENST00000483764 P01737 135 aa13.18□□□□□ -0.3
MRPL28-210ENST00000483764 APCSP02743 223 aa13.18□□□□□ -0.3
MRPL28-210ENST00000483764 IL4P05112 153 aa13.18□□□□□ -0.3
MRPL28-210ENST00000483764 LGALS1P09382 135 aaKnown RBP13.18□□□□□ -0.3
MRPL28-210ENST00000483764 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
MRPL28-210ENST00000483764 ZNF586Q9NXT0 402 aa13.18□□□□□ -0.3
MRPL28-210ENST00000483764 Q86TA4 180 aa13.17□□□□□ -0.3
MRPL28-210ENST00000483764 ZNF414Q96IQ9 312 aa13.17□□□□□ -0.3
MRPL28-210ENST00000483764 LINC00479Q96M42 142 aa13.17□□□□□ -0.3
MRPL28-210ENST00000483764 AAMDCQ9H7C9 122 aa13.17□□□□□ -0.3
MRPL28-210ENST00000483764 TRAV34A0A0B4J273 112 aa13.16□□□□□ -0.3
MRPL28-210ENST00000483764 A0A1B0GUS0 222 aa13.16□□□□□ -0.3
MRPL28-210ENST00000483764 A0A1B0GW15 77 aa13.16□□□□□ -0.3
MRPL28-210ENST00000483764 NPIPB6E9PJ23 425 aa13.16□□□□□ -0.3
MRPL28-210ENST00000483764 BMPR1BO00238 502 aa13.16□□□□□ -0.3
MRPL28-210ENST00000483764 CD28P10747 220 aa13.16□□□□□ -0.3
MRPL28-210ENST00000483764 GNG5P63218 68 aa13.16□□□□□ -0.3
MRPL28-210ENST00000483764 KHDC1LQ5JSQ8 128 aa13.16□□□□□ -0.3
MRPL28-210ENST00000483764 Q6AWC8 147 aa13.16□□□□□ -0.3
MRPL28-210ENST00000483764 TOMM20LQ6UXN7 152 aa13.16□□□□□ -0.3
MRPL28-210ENST00000483764 WFDC12Q8WWY7 111 aa13.16□□□□□ -0.3
MRPL28-210ENST00000483764 CSN1S1P47710 185 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms