RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 SAV1Q9H4B6 383 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-224ENST00000483359 AAMDCQ9H7C9 122 aa13.16□□□□□ -0.3
CPNE1-224ENST00000483359 FOXI2Q6ZQN5 318 aa13.15□□□□□ -0.3
CPNE1-224ENST00000483359 OR4B1Q8NGF8 309 aa13.15□□□□□ -0.3
CPNE1-224ENST00000483359 PRAC2D3DTV9 90 aa13.14□□□□□ -0.31
CPNE1-224ENST00000483359 EBLN2Q6P2I7 272 aa13.14□□□□□ -0.31
CPNE1-224ENST00000483359 SBSPONQ8IVN8 264 aa13.14□□□□□ -0.31
CPNE1-224ENST00000483359 SFT2D1Q8WV19 159 aa13.14□□□□□ -0.31
CPNE1-224ENST00000483359 Q9H3A6 140 aa13.14□□□□□ -0.31
CPNE1-224ENST00000483359 HLA-DRB4P13762 266 aa13.14□□□□□ -0.31
CPNE1-224ENST00000483359 SULT1A2P50226 295 aa13.14□□□□□ -0.31
CPNE1-224ENST00000483359 LINC00322Q6ZN03 302 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-224ENST00000483359 TRPT1Q86TN4 253 aaKnown RBP13.14□□□□□ -0.31
CPNE1-224ENST00000483359 HLA-DRB4X5D2U9 266 aa13.14□□□□□ -0.31
CPNE1-224ENST00000483359 A0A0J9YX75 114 aa13.13□□□□□ -0.31
CPNE1-224ENST00000483359 H3BMM0 161 aa13.13□□□□□ -0.31
CPNE1-224ENST00000483359 HIST1H1AQ02539 215 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-224ENST00000483359 DPPA3Q6W0C5 159 aa13.13□□□□□ -0.31
CPNE1-224ENST00000483359 H2AFB1P0C5Y9 115 aa13.12□□□□□ -0.31
CPNE1-224ENST00000483359 UBE2G2P60604 165 aa13.12□□□□□ -0.31
CPNE1-224ENST00000483359 HAGHQ16775 308 aa13.12□□□□□ -0.31
CPNE1-224ENST00000483359 TMEM167BQ9NRX6 74 aa13.12□□□□□ -0.31
CPNE1-224ENST00000483359 RPH3ALQ9UNE2 315 aa13.12□□□□□ -0.31
CPNE1-224ENST00000483359 DNAH9Q9NYC9 4486 aa13.12□□□□□ -0.31
CPNE1-224ENST00000483359 RAB5CP51148 216 aa13.12□□□□□ -0.31
CPNE1-224ENST00000483359 CNN1P51911 297 aaKnown RBP13.12□□□□□ -0.31
CPNE1-224ENST00000483359 B9D2Q9BPU9 175 aa13.12□□□□□ -0.31
CPNE1-224ENST00000483359 OR8A1Q8NGG7 326 aa13.11□□□□□ -0.31
CPNE1-224ENST00000483359 CLEC5AQ9NY25 188 aa13.11□□□□□ -0.31
CPNE1-224ENST00000483359 PGPA6NDG6 321 aa13.11□□□□□ -0.31
CPNE1-224ENST00000483359 ZNF705EA8MWA4 302 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-224ENST00000483359 APOC4P55056 127 aa13.11□□□□□ -0.31
CPNE1-224ENST00000483359 FXYD7P58549 80 aa13.11□□□□□ -0.31
CPNE1-224ENST00000483359 CA1P00915 261 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-224ENST00000483359 LYPD1Q8N2G4 141 aa13.1□□□□□ -0.31
CPNE1-224ENST00000483359 SUN5Q8TC36 379 aa13.1□□□□□ -0.31
CPNE1-224ENST00000483359 MBD3L1Q8WWY6 194 aa13.1□□□□□ -0.31
CPNE1-224ENST00000483359 IGKV2-40A0A087WW87 121 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-224ENST00000483359 IGKV2D-40P01614 121 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-224ENST00000483359 MRPL53Q96EL3 112 aaKnown RBP13.09□□□□□ -0.31
CPNE1-224ENST00000483359 CSTL1Q9H114 145 aa13.09□□□□□ -0.31
CPNE1-224ENST00000483359 SLC35B3Q9H1N7 401 aa13.09□□□□□ -0.31
CPNE1-224ENST00000483359 RETNQ9HD89 108 aa13.09□□□□□ -0.31
CPNE1-224ENST00000483359 OTORQ9NRC9 128 aa13.09□□□□□ -0.31
CPNE1-224ENST00000483359 PRELID1Q9Y255 219 aa13.09□□□□□ -0.31
CPNE1-224ENST00000483359 YTHDF2Q9Y5A9 579 aaKnown RBP13.09□□□□□ -0.31
CPNE1-224ENST00000483359 GNG5P63218 68 aa13.09□□□□□ -0.31
CPNE1-224ENST00000483359 OR10J6PQ8NGY7 276 aa13.09□□□□□ -0.31
CPNE1-224ENST00000483359 CMTM2Q8TAZ6 248 aa13.09□□□□□ -0.31
CPNE1-224ENST00000483359 GGTLC3B5MD39 225 aa13.08□□□□□ -0.32
CPNE1-224ENST00000483359 DEFB135Q30KP9 77 aa13.08□□□□□ -0.32
CPNE1-224ENST00000483359 DUSP14O95147 198 aaKnown RBP13.07□□□□□ -0.32
CPNE1-224ENST00000483359 SLC25A5P05141 298 aaKnown RBP13.07□□□□□ -0.32
CPNE1-224ENST00000483359 CSN1S1P47710 185 aa13.07□□□□□ -0.32
CPNE1-224ENST00000483359 ERCC8Q13216 396 aa13.07□□□□□ -0.32
CPNE1-224ENST00000483359 KIR2DL5BA0A0G2JN68 375 aa13.07□□□□□ -0.32
CPNE1-224ENST00000483359 KIR2DL5BA0A0G2JPC4 375 aa13.07□□□□□ -0.32
CPNE1-224ENST00000483359 SUMO1P63165 101 aaKnown RBP13.07□□□□□ -0.32
CPNE1-224ENST00000483359 KIR2DL5AQ8N109 375 aa13.07□□□□□ -0.32
CPNE1-224ENST00000483359 KIR2DL5BQ8NHK3 375 aa13.07□□□□□ -0.32
CPNE1-224ENST00000483359 NBEAL2Q6ZNJ1 2754 aa13.07□□□□□ -0.32
CPNE1-224ENST00000483359 HUWE1Q7Z6Z7 4374 aaKnown RBP13.06□□□□□ -0.32
CPNE1-224ENST00000483359 M0R2Z0 102 aa13.06□□□□□ -0.32
CPNE1-224ENST00000483359 NUTF2P61970 127 aaKnown RBP13.06□□□□□ -0.32
CPNE1-224ENST00000483359 CCL20P78556 96 aa13.06□□□□□ -0.32
CPNE1-224ENST00000483359 PPP1R14DQ9NXH3 145 aa13.06□□□□□ -0.32
CPNE1-224ENST00000483359 XCL2Q9UBD3 114 aa13.06□□□□□ -0.32
CPNE1-224ENST00000483359 FAM74A7A6NL05 159 aa13.05□□□□□ -0.32
CPNE1-224ENST00000483359 SPINK13Q1W4C9 94 aa13.05□□□□□ -0.32
CPNE1-224ENST00000483359 AMTNQ6UX39 209 aa13.05□□□□□ -0.32
CPNE1-224ENST00000483359 VGLL1Q99990 258 aa13.05□□□□□ -0.32
CPNE1-224ENST00000483359 COL7A1Q02388 2944 aa13.05□□□□□ -0.32
CPNE1-224ENST00000483359 A0A1W2PRE2 83 aa13.05□□□□□ -0.32
CPNE1-224ENST00000483359 DIRC3C9JPN6 131 aa13.05□□□□□ -0.32
CPNE1-224ENST00000483359 GIG44P09565 113 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-224ENST00000483359 CST9LP1Q5W188 147 aa13.05□□□□□ -0.32
CPNE1-224ENST00000483359 MORN3Q6PF18 240 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-224ENST00000483359 TEX261Q6UWH6 196 aa13.05□□□□□ -0.32
CPNE1-224ENST00000483359 RXFP4Q8TDU9 374 aa13.05□□□□□ -0.32
CPNE1-224ENST00000483359 NPIPB6E9PJ23 425 aa13.04□□□□□ -0.32
CPNE1-224ENST00000483359 PAGE4O60829 102 aa13.04□□□□□ -0.32
CPNE1-224ENST00000483359 GOLT1AQ6ZVE7 132 aa13.04□□□□□ -0.32
CPNE1-224ENST00000483359 C5orf17Q8NAS9 161 aa13.04□□□□□ -0.32
CPNE1-224ENST00000483359 Q8TAT8 98 aa13.04□□□□□ -0.32
CPNE1-224ENST00000483359 PCNPQ8WW12 178 aaKnown RBP13.04□□□□□ -0.32
CPNE1-224ENST00000483359 TM2D3Q9BRN9 247 aa13.04□□□□□ -0.32
CPNE1-224ENST00000483359 GNG13Q9P2W3 67 aa13.04□□□□□ -0.32
CPNE1-224ENST00000483359 TEX46H3BTG2 121 aa13.03□□□□□ -0.32
CPNE1-224ENST00000483359 J3KRW8 73 aa13.03□□□□□ -0.32
CPNE1-224ENST00000483359 HBE1P02100 147 aa13.03□□□□□ -0.32
CPNE1-224ENST00000483359 ATP5G3P48201 142 aa13.03□□□□□ -0.32
CPNE1-224ENST00000483359 SGK494Q96LW2 274 aa13.03□□□□□ -0.32
CPNE1-224ENST00000483359 SPATA25Q9BR10 227 aa13.03□□□□□ -0.32
CPNE1-224ENST00000483359 AGPAT4-IT1Q9H0P7 198 aa13.03□□□□□ -0.32
CPNE1-224ENST00000483359 TRAV12-2A0A075B6T6 113 aa13.03□□□□□ -0.32
CPNE1-224ENST00000483359 A8MTW9 85 aa13.03□□□□□ -0.32
CPNE1-224ENST00000483359 IFNA7P01567 189 aa13.03□□□□□ -0.32
CPNE1-224ENST00000483359 TMEM78Q5T7P6 136 aa13.03□□□□□ -0.32
CPNE1-224ENST00000483359 ZMAT4Q9H898 229 aa13.03□□□□□ -0.32
CPNE1-224ENST00000483359 TRAV8-1A0A0A6YYK1 113 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms