RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 IFNA1P01562 189 aa0.52□□□□□ -2.33
PMS1-219ENST00000483293 MT-ND6P03923 174 aa0.52□□□□□ -2.33
PMS1-219ENST00000483293 CSN2P05814 226 aa0.52□□□□□ -2.33
PMS1-219ENST00000483293 SPINK7P58062 85 aa0.52□□□□□ -2.33
PMS1-219ENST00000483293 HBBP68871 147 aa0.52□□□□□ -2.33
PMS1-219ENST00000483293 RPL19P84098 196 aaKnown RBP0.52□□□□□ -2.33
PMS1-219ENST00000483293 MIR22HGQ0VDD5 57 aa0.52□□□□□ -2.33
PMS1-219ENST00000483293 C1orf140Q5VVS0 124 aa0.52□□□□□ -2.33
PMS1-219ENST00000483293 FOXI2Q6ZQN5 318 aa0.52□□□□□ -2.33
PMS1-219ENST00000483293 SMIM20Q8N5G0 67 aa0.52□□□□□ -2.33
PMS1-219ENST00000483293 FAM216BQ8N7L0 139 aa0.52□□□□□ -2.33
PMS1-219ENST00000483293 RNF11Q9Y3C5 154 aa0.52□□□□□ -2.33
PMS1-219ENST00000483293 GPR31O00270 319 aa0.51□□□□□ -2.33
PMS1-219ENST00000483293 MFSD11O43934 449 aa0.51□□□□□ -2.33
PMS1-219ENST00000483293 BASP1P80723 227 aaKnown RBP0.51□□□□□ -2.33
PMS1-219ENST00000483293 DIAPH2-AS1Q14236 149 aa0.51□□□□□ -2.33
PMS1-219ENST00000483293 Q6ZQY7 126 aa0.51□□□□□ -2.33
PMS1-219ENST00000483293 MALSU1Q96EH3 234 aa0.51□□□□□ -2.33
PMS1-219ENST00000483293 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
PMS1-219ENST00000483293 LOC285556D6RIA3 1793 aa0.5□□□□□ -2.33
PMS1-219ENST00000483293 TRAV5A0A0B4J249 113 aa0.5□□□□□ -2.33
PMS1-219ENST00000483293 RPL37AP61513 92 aaKnown RBP0.5□□□□□ -2.33
PMS1-219ENST00000483293 ARF6P62330 175 aa0.5□□□□□ -2.33
PMS1-219ENST00000483293 GNG3P63215 75 aa0.5□□□□□ -2.33
PMS1-219ENST00000483293 FKBP1CQ5VVH2 108 aa0.5□□□□□ -2.33
PMS1-219ENST00000483293 ZCCHC23Q6ZST2 131 aa0.5□□□□□ -2.33
PMS1-219ENST00000483293 CROCCP2Q86T23 111 aa0.5□□□□□ -2.33
PMS1-219ENST00000483293 BOKQ9UMX3 212 aaPredicted RBP0.5□□□□□ -2.33
PMS1-219ENST00000483293 PIK3C2AO00443 1686 aa0.49□□□□□ -2.33
PMS1-219ENST00000483293 TAS2R41P59536 307 aa0.49□□□□□ -2.33
PMS1-219ENST00000483293 Q6ZS92 163 aa0.49□□□□□ -2.33
PMS1-219ENST00000483293 PLAC8Q9NZF1 115 aa0.49□□□□□ -2.33
PMS1-219ENST00000483293 STOML2Q9UJZ1 356 aa0.49□□□□□ -2.33
PMS1-219ENST00000483293 BCORL1Q5H9F3 1711 aa0.48□□□□□ -2.33
PMS1-219ENST00000483293 NEK7Q8TDX7 302 aa0.48□□□□□ -2.33
PMS1-219ENST00000483293 CCL19Q99731 98 aa0.48□□□□□ -2.33
PMS1-219ENST00000483293 FAM103A1Q9BTL3 118 aaKnown RBP0.48□□□□□ -2.33
PMS1-219ENST00000483293 OR2H1Q9GZK4 316 aa0.48□□□□□ -2.33
PMS1-219ENST00000483293 CST11Q9H112 138 aa0.48□□□□□ -2.33
PMS1-219ENST00000483293 KCPQ6ZWJ8 1503 aa0.48□□□□□ -2.33
PMS1-219ENST00000483293 NISCHQ9Y2I1 1504 aa0.48□□□□□ -2.33
PMS1-219ENST00000483293 CST7O76096 145 aa0.47□□□□□ -2.33
PMS1-219ENST00000483293 KRTAP2-3P0C7H8 128 aa0.47□□□□□ -2.33
PMS1-219ENST00000483293 GLRXP35754 106 aa0.47□□□□□ -2.33
PMS1-219ENST00000483293 RPL35P42766 123 aaKnown RBP0.47□□□□□ -2.33
PMS1-219ENST00000483293 LTC4SQ16873 150 aa0.47□□□□□ -2.33
PMS1-219ENST00000483293 RTL8BQ17RB0 113 aa0.47□□□□□ -2.33
PMS1-219ENST00000483293 RTL8AQ9BWD3 113 aa0.47□□□□□ -2.33
PMS1-219ENST00000483293 KRTAP2-4Q9BYR9 128 aa0.47□□□□□ -2.33
PMS1-219ENST00000483293 KRTAP2-1Q9BYU5 128 aa0.47□□□□□ -2.33
PMS1-219ENST00000483293 FAT4Q6V0I7 4981 aa0.46□□□□□ -2.34
PMS1-219ENST00000483293 NEDD8Q15843 81 aa0.46□□□□□ -2.34
PMS1-219ENST00000483293 TSKUQ8WUA8 353 aa0.46□□□□□ -2.34
PMS1-219ENST00000483293 AP3S1Q92572 193 aa0.46□□□□□ -2.34
PMS1-219ENST00000483293 MED11Q9P086 117 aa0.46□□□□□ -2.34
PMS1-219ENST00000483293 TPRKBQ9Y3C4 175 aa0.46□□□□□ -2.34
PMS1-219ENST00000483293 TNCP24821 2201 aa0.46□□□□□ -2.34
PMS1-219ENST00000483293 POU6F1Q14863 301 aa0.45□□□□□ -2.34
PMS1-219ENST00000483293 LINC00299Q6ZSB3 139 aa0.45□□□□□ -2.34
PMS1-219ENST00000483293 ATOH7Q8N100 152 aa0.45□□□□□ -2.34
PMS1-219ENST00000483293 PLAC4Q8WY50 150 aa0.45□□□□□ -2.34
PMS1-219ENST00000483293 BORCS8Q96FH0 119 aa0.45□□□□□ -2.34
PMS1-219ENST00000483293 OR4C12Q96R67 309 aa0.45□□□□□ -2.34
PMS1-219ENST00000483293 IGHV3-33P01772 117 aa0.44□□□□□ -2.34
PMS1-219ENST00000483293 TMED4Q7Z7H5 227 aa0.44□□□□□ -2.34
PMS1-219ENST00000483293 ANGPTL5Q86XS5 388 aa0.44□□□□□ -2.34
PMS1-219ENST00000483293 EFCAB11Q9BUY7 163 aa0.44□□□□□ -2.34
PMS1-219ENST00000483293 OTORQ9NRC9 128 aa0.44□□□□□ -2.34
PMS1-219ENST00000483293 JPT1Q9UK76 154 aa0.44□□□□□ -2.34
PMS1-219ENST00000483293 ANKRD31Q8N7Z5 1873 aa0.44□□□□□ -2.34
PMS1-219ENST00000483293 CASC2Q6XLA1 102 aa0.43□□□□□ -2.34
PMS1-219ENST00000483293 LINC00269Q8N2A0 174 aa0.43□□□□□ -2.34
PMS1-219ENST00000483293 NUP35Q8NFH5 326 aa0.43□□□□□ -2.34
PMS1-219ENST00000483293 DYDC1Q8WWB3 177 aa0.43□□□□□ -2.34
PMS1-219ENST00000483293 CARD19Q96LW7 228 aa0.43□□□□□ -2.34
PMS1-219ENST00000483293 HOPXQ9BPY8 73 aaPredicted RBP0.43□□□□□ -2.34
PMS1-219ENST00000483293 TAF9BQ9HBM6 251 aa0.43□□□□□ -2.34
PMS1-219ENST00000483293 NAT8BQ9UHF3 227 aa0.43□□□□□ -2.34
PMS1-219ENST00000483293 UFC1Q9Y3C8 167 aa0.43□□□□□ -2.34
PMS1-219ENST00000483293 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
PMS1-219ENST00000483293 C5orf58C9J3I9 102 aa0.42□□□□□ -2.34
PMS1-219ENST00000483293 CCL4P13236 92 aa0.42□□□□□ -2.34
PMS1-219ENST00000483293 FABP4P15090 132 aa0.42□□□□□ -2.34
PMS1-219ENST00000483293 FXYD6P3P58550 94 aa0.42□□□□□ -2.34
PMS1-219ENST00000483293 PHF5AQ7RTV0 110 aaKnown RBP0.42□□□□□ -2.34
PMS1-219ENST00000483293 CDC26Q8NHZ8 85 aa0.42□□□□□ -2.34
PMS1-219ENST00000483293 RMND5BQ96G75 393 aaPredicted RBP0.42□□□□□ -2.34
PMS1-219ENST00000483293 TANC2Q9HCD6 1990 aa0.42□□□□□ -2.34
PMS1-219ENST00000483293 ADGBQ8N7X0 1667 aa0.42□□□□□ -2.34
PMS1-219ENST00000483293 RTL9Q8NET4 1388 aa0.42□□□□□ -2.34
PMS1-219ENST00000483293 ANK1P16157 1881 aa0.41□□□□□ -2.34
PMS1-219ENST00000483293 KPNA4O00629 521 aaPredicted RBP0.41□□□□□ -2.34
PMS1-219ENST00000483293 FABP2P12104 132 aa0.41□□□□□ -2.34
PMS1-219ENST00000483293 STX19Q8N4C7 294 aa0.41□□□□□ -2.34
PMS1-219ENST00000483293 FAM24BQ8N5W8 94 aa0.41□□□□□ -2.34
PMS1-219ENST00000483293 PLEKHB2Q96CS7 222 aa0.41□□□□□ -2.34
PMS1-219ENST00000483293 NUP210Q8TEM1 1887 aaPredicted RBP0.41□□□□□ -2.34
PMS1-219ENST00000483293 NINQ8N4C6 2090 aa0.41□□□□□ -2.34
PMS1-219ENST00000483293 C3orf85A0A1B0GTC6 90 aa0.4□□□□□ -2.35
PMS1-219ENST00000483293 H3BQV1 296 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms