RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 RFNGQ9Y644 331 aa13.28□□□□□ -0.28
SMIM4-204ENST00000482728 A0A1W2PPV4 95 aa13.27□□□□□ -0.29
SMIM4-204ENST00000482728 PRAC2D3DTV9 90 aa13.27□□□□□ -0.29
SMIM4-204ENST00000482728 NDUFB4O95168 129 aa13.27□□□□□ -0.29
SMIM4-204ENST00000482728 HBE1P02100 147 aa13.27□□□□□ -0.29
SMIM4-204ENST00000482728 OR10J4P0C629 311 aa13.27□□□□□ -0.29
SMIM4-204ENST00000482728 CEMP1Q6PRD7 247 aaPredicted RBP13.27□□□□□ -0.29
SMIM4-204ENST00000482728 C1orf158Q8N1D5 194 aa13.27□□□□□ -0.29
SMIM4-204ENST00000482728 PHLDA1Q8WV24 401 aaPredicted RBP13.27□□□□□ -0.29
SMIM4-204ENST00000482728 TNFSF18Q9UNG2 199 aa13.27□□□□□ -0.29
SMIM4-204ENST00000482728 KLK5Q9Y337 293 aaPredicted RBP13.27□□□□□ -0.29
SMIM4-204ENST00000482728 TMEM189A5PLL7 270 aa13.26□□□□□ -0.29
SMIM4-204ENST00000482728 M6PRP20645 277 aa13.26□□□□□ -0.29
SMIM4-204ENST00000482728 TSPOP30536 169 aa13.26□□□□□ -0.29
SMIM4-204ENST00000482728 EMP1P54849 157 aa13.26□□□□□ -0.29
SMIM4-204ENST00000482728 KHDC3LQ587J8 217 aa13.26□□□□□ -0.29
SMIM4-204ENST00000482728 MRPL53Q96EL3 112 aaKnown RBP13.26□□□□□ -0.29
SMIM4-204ENST00000482728 TRAV12-2A0A075B6T6 113 aa13.25□□□□□ -0.29
SMIM4-204ENST00000482728 BORCS7-ASMTA0A0B4J1R7 106 aa13.25□□□□□ -0.29
SMIM4-204ENST00000482728 M0R3E3 92 aa13.25□□□□□ -0.29
SMIM4-204ENST00000482728 ICAM4Q14773 271 aa13.25□□□□□ -0.29
SMIM4-204ENST00000482728 RRN3P1Q2M238 152 aa13.25□□□□□ -0.29
SMIM4-204ENST00000482728 BAP18Q8IXM2 172 aa13.25□□□□□ -0.29
SMIM4-204ENST00000482728 EXOC3-AS1Q8N2X6 119 aa13.25□□□□□ -0.29
SMIM4-204ENST00000482728 OR10G4Q8NGN3 311 aa13.25□□□□□ -0.29
SMIM4-204ENST00000482728 OR10G9Q8NGN4 311 aa13.25□□□□□ -0.29
SMIM4-204ENST00000482728 OR10G7Q8NGN6 311 aa13.25□□□□□ -0.29
SMIM4-204ENST00000482728 FXYD5Q96DB9 178 aa13.25□□□□□ -0.29
SMIM4-204ENST00000482728 RNF222A6NCQ9 220 aa13.24□□□□□ -0.29
SMIM4-204ENST00000482728 CRXO43186 299 aaPredicted RBP13.24□□□□□ -0.29
SMIM4-204ENST00000482728 CDKN1BP46527 198 aa13.24□□□□□ -0.29
SMIM4-204ENST00000482728 RAB2AP61019 212 aa13.24□□□□□ -0.29
SMIM4-204ENST00000482728 UBE2L3P68036 154 aaKnown RBP13.24□□□□□ -0.29
SMIM4-204ENST00000482728 RPP25LQ8N5L8 163 aaKnown RBP13.24□□□□□ -0.29
SMIM4-204ENST00000482728 PSMG3Q9BT73 122 aaPredicted RBP13.24□□□□□ -0.29
SMIM4-204ENST00000482728 ARPC5O15511 151 aa13.23□□□□□ -0.29
SMIM4-204ENST00000482728 JTBO76095 146 aa13.23□□□□□ -0.29
SMIM4-204ENST00000482728 ATP6V0CP27449 155 aa13.23□□□□□ -0.29
SMIM4-204ENST00000482728 RANP62826 216 aaKnown RBP13.23□□□□□ -0.29
SMIM4-204ENST00000482728 SERF2P84101 59 aa13.23□□□□□ -0.29
SMIM4-204ENST00000482728 FAM122CQ6P4D5 195 aa13.23□□□□□ -0.29
SMIM4-204ENST00000482728 OR2G3Q8NGZ4 309 aa13.23□□□□□ -0.29
SMIM4-204ENST00000482728 LINC01587Q99440 93 aa13.23□□□□□ -0.29
SMIM4-204ENST00000482728 CSMD3Q7Z407 3707 aa13.23□□□□□ -0.29
SMIM4-204ENST00000482728 LOC102723971A0A1B0GUV8 181 aa13.22□□□□□ -0.29
SMIM4-204ENST00000482728 NPIPB6E9PJ23 425 aa13.22□□□□□ -0.29
SMIM4-204ENST00000482728 MBP02144 154 aa13.22□□□□□ -0.29
SMIM4-204ENST00000482728 SPART-AS1P0CW21 52 aa13.22□□□□□ -0.29
SMIM4-204ENST00000482728 RPL7L1Q6DKI1 246 aaKnown RBP13.22□□□□□ -0.29
SMIM4-204ENST00000482728 TMEM256Q8N2U0 113 aa13.22□□□□□ -0.29
SMIM4-204ENST00000482728 GNPNAT1Q96EK6 184 aaPredicted RBP13.22□□□□□ -0.29
SMIM4-204ENST00000482728 LCE6AA0A183 80 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 C11orf94C9JXX5 98 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 G3V3Q6 166 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 SMLR1H3BR10 107 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 TAAR5O14804 337 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 EIF3GO75821 320 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMIM4-204ENST00000482728 CT45A10P0DMU9 189 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 LEPP41159 167 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 CSN1S1P47710 185 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 PQLC2Q6ZP29 291 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 LYPD1Q8N2G4 141 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 ZNF503Q96F45 646 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 PHYHIPLQ96FC7 376 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 LINC00477Q96M19 166 aa13.21□□□□□ -0.29
SMIM4-204ENST00000482728 ZNF705GA8MUZ8 300 aaPredicted RBP13.2□□□□□ -0.3
SMIM4-204ENST00000482728 HTN1P15515 57 aa13.2□□□□□ -0.3
SMIM4-204ENST00000482728 ODF3Q96PU9 254 aa13.2□□□□□ -0.3
SMIM4-204ENST00000482728 CELA1Q9UNI1 258 aa13.2□□□□□ -0.3
SMIM4-204ENST00000482728 KMT2CQ8NEZ4 4911 aaKnown RBP13.2□□□□□ -0.3
SMIM4-204ENST00000482728 J3KRW8 73 aa13.19□□□□□ -0.3
SMIM4-204ENST00000482728 HMGB3O15347 200 aaKnown RBP13.19□□□□□ -0.3
SMIM4-204ENST00000482728 CDC34P49427 236 aaPredicted RBP13.19□□□□□ -0.3
SMIM4-204ENST00000482728 ERCC8Q13216 396 aa13.19□□□□□ -0.3
SMIM4-204ENST00000482728 C2CD4CQ8TF44 421 aa13.19□□□□□ -0.3
SMIM4-204ENST00000482728 AGPAT4-IT1Q9H0P7 198 aa13.19□□□□□ -0.3
SMIM4-204ENST00000482728 SH3BGRL3Q9H299 93 aa13.19□□□□□ -0.3
SMIM4-204ENST00000482728 Q9H3A6 140 aa13.19□□□□□ -0.3
SMIM4-204ENST00000482728 TRAV10A0A0B4J240 114 aa13.18□□□□□ -0.3
SMIM4-204ENST00000482728 TEX48A0A1B0GUV7 120 aa13.18□□□□□ -0.3
SMIM4-204ENST00000482728 TAS2R60P59551 318 aa13.18□□□□□ -0.3
SMIM4-204ENST00000482728 C12orf74Q32Q52 190 aa13.18□□□□□ -0.3
SMIM4-204ENST00000482728 TMEM78Q5T7P6 136 aa13.18□□□□□ -0.3
SMIM4-204ENST00000482728 C9orf47Q6ZRZ4 202 aa13.18□□□□□ -0.3
SMIM4-204ENST00000482728 Q6ZTC4 211 aa13.18□□□□□ -0.3
SMIM4-204ENST00000482728 ZNF767PQ75MW2 155 aa13.18□□□□□ -0.3
SMIM4-204ENST00000482728 RXFP4Q8TDU9 374 aa13.18□□□□□ -0.3
SMIM4-204ENST00000482728 RAB24Q969Q5 203 aa13.18□□□□□ -0.3
SMIM4-204ENST00000482728 C20orf144Q9BQM9 153 aa13.18□□□□□ -0.3
SMIM4-204ENST00000482728 ACTR3CQ9C0K3 210 aaPredicted RBP13.18□□□□□ -0.3
SMIM4-204ENST00000482728 YTHDF2Q9Y5A9 579 aaKnown RBP13.18□□□□□ -0.3
SMIM4-204ENST00000482728 STARD9Q9P2P6 4700 aa13.18□□□□□ -0.3
SMIM4-204ENST00000482728 IGKV2-40A0A087WW87 121 aaPredicted RBP13.17□□□□□ -0.3
SMIM4-204ENST00000482728 H7BYZ3 331 aa13.17□□□□□ -0.3
SMIM4-204ENST00000482728 IGKV2D-40P01614 121 aaPredicted RBP13.17□□□□□ -0.3
SMIM4-204ENST00000482728 PRM2P04554 102 aa13.17□□□□□ -0.3
SMIM4-204ENST00000482728 KIR3DS1Q14943 382 aa13.17□□□□□ -0.3
SMIM4-204ENST00000482728 FAM74A1Q5RGS3 127 aa13.17□□□□□ -0.3
SMIM4-204ENST00000482728 FAM222AQ5U5X8 452 aa13.17□□□□□ -0.3
SMIM4-204ENST00000482728 GFI1BQ5VTD9 330 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms