RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 NUDT3O95989 172 aa13.02□□□□□ -0.33
CLK1-211ENST00000481641 ATP5G1P05496 136 aa13.02□□□□□ -0.33
CLK1-211ENST00000481641 ATP5G3P48201 142 aa13.02□□□□□ -0.33
CLK1-211ENST00000481641 BAXQ07812 192 aa13.02□□□□□ -0.33
CLK1-211ENST00000481641 IL15RAQ13261 267 aa13.02□□□□□ -0.33
CLK1-211ENST00000481641 GFI1BQ5VTD9 330 aa13.02□□□□□ -0.33
CLK1-211ENST00000481641 OR10J6PQ8NGY7 276 aa13.02□□□□□ -0.33
CLK1-211ENST00000481641 RNASE8Q8TDE3 154 aaKnown RBP13.02□□□□□ -0.33
CLK1-211ENST00000481641 LYRM2Q9NU23 88 aaPredicted RBP13.02□□□□□ -0.33
CLK1-211ENST00000481641 ZNF586Q9NXT0 402 aa13.02□□□□□ -0.33
CLK1-211ENST00000481641 TIMM8BQ9Y5J9 83 aaPredicted RBP13.02□□□□□ -0.33
CLK1-211ENST00000481641 PXMP4Q9Y6I8 212 aa13.02□□□□□ -0.33
CLK1-211ENST00000481641 FAM240BA0A1B0GVZ2 78 aa13.01□□□□□ -0.33
CLK1-211ENST00000481641 CBY3A6NI87 242 aa13.01□□□□□ -0.33
CLK1-211ENST00000481641 CT45A10P0DMU9 189 aa13.01□□□□□ -0.33
CLK1-211ENST00000481641 PVALBP20472 110 aaPredicted RBP13.01□□□□□ -0.33
CLK1-211ENST00000481641 SULT1A1P50225 295 aa13.01□□□□□ -0.33
CLK1-211ENST00000481641 VWC2Q2TAL6 325 aa13.01□□□□□ -0.33
CLK1-211ENST00000481641 TMEM252Q8N6L7 170 aa13.01□□□□□ -0.33
CLK1-211ENST00000481641 OR1L4Q8NGR5 311 aa13.01□□□□□ -0.33
CLK1-211ENST00000481641 ATG101Q9BSB4 218 aa13.01□□□□□ -0.33
CLK1-211ENST00000481641 CCDC32Q9BV29 185 aa13.01□□□□□ -0.33
CLK1-211ENST00000481641 SLC39A9Q9NUM3 307 aa13.01□□□□□ -0.33
CLK1-211ENST00000481641 H7BYZ3 331 aa13□□□□□ -0.33
CLK1-211ENST00000481641 TMEM263Q8WUH6 116 aaKnown RBP13□□□□□ -0.33
CLK1-211ENST00000481641 FGF7P21781 194 aa12.99□□□□□ -0.33
CLK1-211ENST00000481641 S100A11P31949 105 aa12.99□□□□□ -0.33
CLK1-211ENST00000481641 RPL29P47914 159 aaKnown RBP12.99□□□□□ -0.33
CLK1-211ENST00000481641 ZNF493Q6ZR52 646 aa12.99□□□□□ -0.33
CLK1-211ENST00000481641 RNF141Q8WVD5 230 aa12.99□□□□□ -0.33
CLK1-211ENST00000481641 PFDN5Q99471 154 aa12.99□□□□□ -0.33
CLK1-211ENST00000481641 TRAV12-3A0A0B4J271 114 aa12.98□□□□□ -0.33
CLK1-211ENST00000481641 M0R3E3 92 aa12.98□□□□□ -0.33
CLK1-211ENST00000481641 GCSAMLQ5JQS6 135 aa12.98□□□□□ -0.33
CLK1-211ENST00000481641 C1orf134Q5TEV5 83 aa12.98□□□□□ -0.33
CLK1-211ENST00000481641 STX12Q86Y82 276 aa12.98□□□□□ -0.33
CLK1-211ENST00000481641 C20orf144Q9BQM9 153 aa12.98□□□□□ -0.33
CLK1-211ENST00000481641 GPN1Q9HCN4 374 aaPredicted RBP12.98□□□□□ -0.33
CLK1-211ENST00000481641 NPIPB6E9PJ23 425 aa12.97□□□□□ -0.33
CLK1-211ENST00000481641 SIX6O95475 246 aa12.97□□□□□ -0.33
CLK1-211ENST00000481641 ERCC8Q13216 396 aa12.97□□□□□ -0.33
CLK1-211ENST00000481641 GUK1Q16774 197 aa12.97□□□□□ -0.33
CLK1-211ENST00000481641 ZNRF2Q8NHG8 242 aa12.97□□□□□ -0.33
CLK1-211ENST00000481641 TRBV19A0A075B6N1 114 aa12.96□□□□□ -0.33
CLK1-211ENST00000481641 PYYP10082 97 aa12.96□□□□□ -0.33
CLK1-211ENST00000481641 LEPP41159 167 aa12.96□□□□□ -0.33
CLK1-211ENST00000481641 FAM3BP58499 235 aaPredicted RBP12.96□□□□□ -0.33
CLK1-211ENST00000481641 HBG1P69891 147 aa12.96□□□□□ -0.33
CLK1-211ENST00000481641 HBG2P69892 147 aa12.96□□□□□ -0.33
CLK1-211ENST00000481641 NHLH2Q02577 135 aa12.96□□□□□ -0.33
CLK1-211ENST00000481641 OR5I1Q13606 314 aa12.96□□□□□ -0.33
CLK1-211ENST00000481641 MZT2BQ6NZ67 158 aa12.96□□□□□ -0.33
CLK1-211ENST00000481641 CCDC28AQ8IWP9 274 aa12.96□□□□□ -0.33
CLK1-211ENST00000481641 LINC00588Q9Y4M8 146 aa12.96□□□□□ -0.33
CLK1-211ENST00000481641 GAGE12BA1L429 117 aa12.95□□□□□ -0.34
CLK1-211ENST00000481641 GAGE7O76087 117 aa12.95□□□□□ -0.34
CLK1-211ENST00000481641 NDUFB4O95168 129 aa12.95□□□□□ -0.34
CLK1-211ENST00000481641 GAGE12FP0CL80 117 aa12.95□□□□□ -0.34
CLK1-211ENST00000481641 GAGE12GP0CL81 117 aa12.95□□□□□ -0.34
CLK1-211ENST00000481641 GAGE12IP0CL82 117 aa12.95□□□□□ -0.34
CLK1-211ENST00000481641 ASAH1Q13510 395 aa12.95□□□□□ -0.34
CLK1-211ENST00000481641 ATP6V1FQ16864 119 aa12.95□□□□□ -0.34
CLK1-211ENST00000481641 SOHLH1Q5JUK2 328 aa12.95□□□□□ -0.34
CLK1-211ENST00000481641 THAP6Q8TBB0 222 aa12.95□□□□□ -0.34
CLK1-211ENST00000481641 CHAC2Q8WUX2 184 aa12.95□□□□□ -0.34
CLK1-211ENST00000481641 BLNKQ8WV28 456 aa12.95□□□□□ -0.34
CLK1-211ENST00000481641 A0A0J9YY99 117 aa12.94□□□□□ -0.34
CLK1-211ENST00000481641 NBDYA0A0U1RRE5 68 aa12.94□□□□□ -0.34
CLK1-211ENST00000481641 ZNF253O75346 499 aa12.94□□□□□ -0.34
CLK1-211ENST00000481641 HOXA5P20719 270 aa12.94□□□□□ -0.34
CLK1-211ENST00000481641 ZNF575Q86XF7 245 aa12.94□□□□□ -0.34
CLK1-211ENST00000481641 EXOC3-AS1Q8N2X6 119 aa12.94□□□□□ -0.34
CLK1-211ENST00000481641 LINC00612Q8N6U2 182 aa12.94□□□□□ -0.34
CLK1-211ENST00000481641 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
CLK1-211ENST00000481641 NPCDR1Q9BY65 106 aa12.94□□□□□ -0.34
CLK1-211ENST00000481641 TMEM14CQ9P0S9 112 aa12.94□□□□□ -0.34
CLK1-211ENST00000481641 TRAV26-1A0A087WT03 109 aa12.93□□□□□ -0.34
CLK1-211ENST00000481641 MED14OSP0DP75 135 aa12.93□□□□□ -0.34
CLK1-211ENST00000481641 HIST1H1EP10412 219 aaKnown RBP12.93□□□□□ -0.34
CLK1-211ENST00000481641 CCL18P55774 89 aa12.93□□□□□ -0.34
CLK1-211ENST00000481641 CLINT1Q14677 625 aa12.93□□□□□ -0.34
CLK1-211ENST00000481641 SLC25A2Q9BXI2 301 aa12.93□□□□□ -0.34
CLK1-211ENST00000481641 OR5AC2Q9NZP5 309 aa12.93□□□□□ -0.34
CLK1-211ENST00000481641 TIMM9Q9Y5J7 89 aa12.93□□□□□ -0.34
CLK1-211ENST00000481641 SNURFLB1AK76 121 aa12.92□□□□□ -0.34
CLK1-211ENST00000481641 RLN2P04090 185 aa12.92□□□□□ -0.34
CLK1-211ENST00000481641 TNP2Q05952 138 aa12.92□□□□□ -0.34
CLK1-211ENST00000481641 CD300CQ08708 224 aa12.92□□□□□ -0.34
CLK1-211ENST00000481641 LRRC37A5PQ49AS3 106 aa12.92□□□□□ -0.34
CLK1-211ENST00000481641 MIR17HGQ75NE6 70 aa12.92□□□□□ -0.34
CLK1-211ENST00000481641 SSX7Q7RTT5 188 aa12.92□□□□□ -0.34
CLK1-211ENST00000481641 OR5C1Q8NGR4 320 aa12.92□□□□□ -0.34
CLK1-211ENST00000481641 S100ZQ8WXG8 99 aa12.92□□□□□ -0.34
CLK1-211ENST00000481641 GNPNAT1Q96EK6 184 aaPredicted RBP12.92□□□□□ -0.34
CLK1-211ENST00000481641 MRPL53Q96EL3 112 aaKnown RBP12.92□□□□□ -0.34
CLK1-211ENST00000481641 MUC4Q99102 2169 aa12.92□□□□□ -0.34
CLK1-211ENST00000481641 AGPAT4-IT1Q9H0P7 198 aa12.92□□□□□ -0.34
CLK1-211ENST00000481641 H0YIZ8 118 aa12.91□□□□□ -0.34
CLK1-211ENST00000481641 IFITM3Q01628 133 aa12.91□□□□□ -0.34
CLK1-211ENST00000481641 BTN1A1Q13410 526 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms