RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 LRRC20Q8TCA0 184 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 MITD1Q8WV92 249 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 MRPL53Q96EL3 112 aaKnown RBP2.94□□□□□ -1.94
VPS13D-208ENST00000481484 ATG101Q9BSB4 218 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 RSG1Q9BU20 258 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 SCRT1Q9BWW7 348 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 RBM38Q9H0Z9 239 aaKnown RBP2.94□□□□□ -1.94
VPS13D-208ENST00000481484 SLC35B3Q9H1N7 401 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 NPVFQ9HCQ7 196 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 PSENENQ9NZ42 101 aa2.94□□□□□ -1.94
VPS13D-208ENST00000481484 RCL1Q9Y2P8 373 aaKnown RBP2.94□□□□□ -1.94
VPS13D-208ENST00000481484 HSPG2P98160 4391 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 A0A1B0GVY2 172 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 A0A1W2PPQ1 181 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 F6UB75 175 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 H3BNG1 76 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 M0R2Z0 102 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 GOSR2O14653 212 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 SCGB1D2O95969 90 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 IGKV3-20P01619 116 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 OR5G3P0C626 314 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 LEPP41159 167 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 CCL18P55774 89 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 RHOBP62745 196 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 SLC38A11Q08AI6 406 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 PSG3Q16557 428 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 C1orf134Q5TEV5 83 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 Q6ZRG5 221 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 LINC00299Q6ZSB3 139 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 ZNF767PQ75MW2 155 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 CCDC28AQ8IWP9 274 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 BAP18Q8IXM2 172 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 C1orf158Q8N1D5 194 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 C12orf45Q8N5I9 185 aaPredicted RBP2.93□□□□□ -1.94
VPS13D-208ENST00000481484 RNASE8Q8TDE3 154 aaKnown RBP2.93□□□□□ -1.94
VPS13D-208ENST00000481484 RPUSD4Q96CM3 377 aaKnown RBP2.93□□□□□ -1.94
VPS13D-208ENST00000481484 PYGO2Q9BRQ0 406 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 CCDC32Q9BV29 185 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 C20orf85Q9H1P6 137 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 ARV1Q9H2C2 271 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 ZNF331Q9NQX6 463 aaPredicted RBP2.93□□□□□ -1.94
VPS13D-208ENST00000481484 UQCC1Q9NVA1 299 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 NDUFA13Q9P0J0 144 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 PRELID1Q9Y255 219 aa2.93□□□□□ -1.94
VPS13D-208ENST00000481484 TIMM8BQ9Y5J9 83 aaPredicted RBP2.93□□□□□ -1.94
VPS13D-208ENST00000481484 LRP1BQ9NZR2 4599 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 TRAV8-2A0A0B4J237 113 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 TRBV7-9A0A0J9YWB2 115 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 NBDYA0A0U1RRE5 68 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 CBY3A6NI87 242 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 PMS2P5A8MQ11 134 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 SNURFLB1AK76 121 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 AGPAT2O15120 278 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 MRPS12O15235 138 aaKnown RBP2.92□□□□□ -1.94
VPS13D-208ENST00000481484 RTL8CO15255 209 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 CRXO43186 299 aaPredicted RBP2.92□□□□□ -1.94
VPS13D-208ENST00000481484 LYRM1O43325 122 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 RLN2P04090 185 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 NMBP08949 121 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 METTL15P1P0C7V9 234 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 PET100P0DJ07 73 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 IGLC2P0DOY2 106 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 IL7P13232 177 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 HTN3P15516 51 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 ANXA7P20073 488 aaKnown RBP2.92□□□□□ -1.94
VPS13D-208ENST00000481484 BTCP35070 178 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 CAMLGP49069 296 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 FXYD7P58549 80 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 BAXQ07812 192 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 FGL1Q08830 312 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 CLINT1Q14677 625 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 VWC2Q2TAL6 325 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 C10orf113Q5VZT2 155 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 LINC00305Q7Z4B0 112 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 RNF182Q8N6D2 247 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 LINC00612Q8N6U2 182 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 CHAC2Q8WUX2 184 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 C18orf15Q96N68 181 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 UHRF2Q96PU4 802 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 LINC01587Q99440 93 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 LINC00467Q9BRT7 94 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 UPK3BQ9BT76 320 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 ARL6Q9H0F7 186 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 LYRM2Q9NU23 88 aaPredicted RBP2.92□□□□□ -1.94
VPS13D-208ENST00000481484 TMEM14CQ9P0S9 112 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 C11orf21Q9P2W6 132 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 WDR83OSQ9Y284 106 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 ABCA13Q86UQ4 5058 aa2.92□□□□□ -1.94
VPS13D-208ENST00000481484 UBE2L5PA0A1B0GUS4 154 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 PLAC8L1A1L4L8 177 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 C7orf66A4D0T2 115 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 F5H768 121 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 K7EP13 123 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 CDK2AP2O75956 126 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 MBPP02686 304 aaPredicted RBP2.91□□□□□ -1.94
VPS13D-208ENST00000481484 SLC25A5P05141 298 aaKnown RBP2.91□□□□□ -1.94
VPS13D-208ENST00000481484 HIST1H1EP10412 219 aaKnown RBP2.91□□□□□ -1.94
VPS13D-208ENST00000481484 M6PRP20645 277 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 GATA2P23769 480 aaPredicted RBP2.91□□□□□ -1.94
VPS13D-208ENST00000481484 S100A11P31949 105 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms