RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 USMG5Q96IX5 58 aa9.39□□□□□ -0.91
TRIM27-205ENST00000481474 TRBV20-1A0A075B6N2 111 aa9.38□□□□□ -0.91
TRIM27-205ENST00000481474 FAM120AOSQ5T036 256 aa9.38□□□□□ -0.91
TRIM27-205ENST00000481474 TRPT1Q86TN4 253 aaKnown RBP9.38□□□□□ -0.91
TRIM27-205ENST00000481474 SIGLEC1Q9BZZ2 1709 aa9.38□□□□□ -0.91
TRIM27-205ENST00000481474 TRBV9A0A0B4J1U6 114 aa9.38□□□□□ -0.91
TRIM27-205ENST00000481474 TRAV3A0A0B4J244 114 aa9.38□□□□□ -0.91
TRIM27-205ENST00000481474 E7EQL1 145 aa9.38□□□□□ -0.91
TRIM27-205ENST00000481474 HLA-DQB1P01920 261 aa9.38□□□□□ -0.91
TRIM27-205ENST00000481474 PCP2Q8IVA1 136 aa9.38□□□□□ -0.91
TRIM27-205ENST00000481474 CDKN1BP46527 198 aa9.38□□□□□ -0.91
TRIM27-205ENST00000481474 C5orf64Q2M2E5 130 aa9.38□□□□□ -0.91
TRIM27-205ENST00000481474 ASPHD1Q5U4P2 390 aa9.38□□□□□ -0.91
TRIM27-205ENST00000481474 AMTNQ6UX39 209 aa9.38□□□□□ -0.91
TRIM27-205ENST00000481474 TCRBV5S1A1TA0A578 114 aa9.37□□□□□ -0.91
TRIM27-205ENST00000481474 WFDC6Q9BQY6 131 aa9.37□□□□□ -0.91
TRIM27-205ENST00000481474 A0A1W2PR77 199 aa9.37□□□□□ -0.91
TRIM27-205ENST00000481474 FGFBP3Q8TAT2 258 aa9.37□□□□□ -0.91
TRIM27-205ENST00000481474 DOCK1Q14185 1865 aa9.37□□□□□ -0.91
TRIM27-205ENST00000481474 IGLV1-36A0A0B4J1U3 117 aa9.37□□□□□ -0.91
TRIM27-205ENST00000481474 PLA2G10O15496 165 aa9.37□□□□□ -0.91
TRIM27-205ENST00000481474 GUSBP1Q15486 140 aa9.37□□□□□ -0.91
TRIM27-205ENST00000481474 HERV-K104P63124 156 aa9.37□□□□□ -0.91
TRIM27-205ENST00000481474 TMEM30BQ3MIR4 351 aa9.37□□□□□ -0.91
TRIM27-205ENST00000481474 AMN1Q8IY45 258 aa9.37□□□□□ -0.91
TRIM27-205ENST00000481474 SHANK3Q9BYB0 1731 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 FAM223BA6NKX1 122 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 EFNB3Q15768 340 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 FAM223AQ8IWN6 122 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 GNB1LQ9BYB4 327 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 U3KQE9 123 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 TJP1Q07157 1748 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 IGLV3-9A0A075B6K5 115 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
TRIM27-205ENST00000481474 HIGD2AQ9BW72 106 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 COX7B2Q8TF08 81 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 WIPF2Q8TF74 440 aaPredicted RBP9.36□□□□□ -0.91
TRIM27-205ENST00000481474 MYO5AQ9Y4I1 1855 aaKnown RBP9.36□□□□□ -0.91
TRIM27-205ENST00000481474 IGHV1-69DA0A0B4J2H0 117 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 IGHV1-69P01742 117 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 MLST8Q9BVC4 326 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 K7EMI3 77 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 ERVH48-1M5A8F1 160 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 C5P01031 1676 aa9.36□□□□□ -0.91
TRIM27-205ENST00000481474 C4orf51C9J302 202 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 NDUFS7O75251 213 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 WISP1O95388 367 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 NOVP48745 357 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 DEFB112Q30KQ8 113 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 RPRMLQ8N4K4 120 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.35□□□□□ -0.91
TRIM27-205ENST00000481474 AJUBAQ96IF1 538 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 PAPPAQ13219 1627 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 NMBP08949 121 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 UTF1Q5T230 341 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 Q6AWC8 147 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 CD177Q8N6Q3 437 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 ZC2HC1AQ96GY0 325 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 PRR25Q96S07 402 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 NEUROG3Q9Y4Z2 214 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 ICOSQ9Y6W8 199 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 DENND4AQ7Z401 1863 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 MRPS18AQ9NVS2 196 aaKnown RBP9.35□□□□□ -0.91
TRIM27-205ENST00000481474 SHISA9B4DS77 424 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 PAQR4Q8N4S7 273 aaPredicted RBP9.35□□□□□ -0.91
TRIM27-205ENST00000481474 ZNF664Q8N3J9 261 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 KIR3DS1Q14943 382 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 TEX36Q5VZQ5 186 aa9.35□□□□□ -0.91
TRIM27-205ENST00000481474 TRAV4A0A0B4J268 109 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 FXYD1O00168 92 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 IFITM1P13164 125 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 HIGD2BQ4VC39 106 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 RETNLBQ9BQ08 111 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 GAGE12HA6NDE8 117 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 WDR86Q86TI4 376 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 LOC285556D6RIA3 1793 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 PATJQ8NI35 1801 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 MST1P26927 711 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 SRSF3P84103 164 aaKnown RBP9.34□□□□□ -0.91
TRIM27-205ENST00000481474 MINOS1Q5TGZ0 78 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 MINOS1-NBL1R4GNA1 71 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 ANKRD36A6QL64 1941 aa9.34□□□□□ -0.91
TRIM27-205ENST00000481474 TANC2Q9HCD6 1990 aa9.33□□□□□ -0.92
TRIM27-205ENST00000481474 SPART-AS1P0CW21 52 aa9.33□□□□□ -0.92
TRIM27-205ENST00000481474 CRYBA4P53673 196 aa9.33□□□□□ -0.92
TRIM27-205ENST00000481474 KNDC1Q76NI1 1749 aa9.33□□□□□ -0.92
TRIM27-205ENST00000481474 YPEL1O60688 119 aa9.33□□□□□ -0.92
TRIM27-205ENST00000481474 FAM104BQ5XKR9 115 aa9.33□□□□□ -0.92
TRIM27-205ENST00000481474 YPEL2Q96QA6 119 aa9.33□□□□□ -0.92
TRIM27-205ENST00000481474 SMAD5-AS1Q9Y6J3 95 aa9.33□□□□□ -0.92
TRIM27-205ENST00000481474 RGPD3A6NKT7 1758 aaPredicted RBP9.33□□□□□ -0.92
TRIM27-205ENST00000481474 C1QTNF5Q9BXJ0 243 aa9.33□□□□□ -0.92
TRIM27-205ENST00000481474 ETV2O00321 342 aaPredicted RBP9.33□□□□□ -0.92
TRIM27-205ENST00000481474 OCC1Q8TAD7 63 aa9.33□□□□□ -0.92
TRIM27-205ENST00000481474 IGHV4-61A0A0C4DH41 118 aa9.33□□□□□ -0.92
TRIM27-205ENST00000481474 ATRAIDQ6UW56 229 aa9.33□□□□□ -0.92
TRIM27-205ENST00000481474 IGHV1-24A0A0C4DH33 117 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 OVOL2Q9BRP0 275 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 IGHV1OR15-1A0A075B7D0 117 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 A0A1W2PRE2 83 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms