RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ARL16Q0P5N6 197 aa8.16□□□□□ -1.1
CCM2-213ENST00000480658 OPCMLQ14982 345 aa8.16□□□□□ -1.1
CCM2-213ENST00000480658 ZNF767PQ75MW2 155 aa8.16□□□□□ -1.1
CCM2-213ENST00000480658 C11orf1Q9H5F2 150 aa8.16□□□□□ -1.1
CCM2-213ENST00000480658 FAM24AA6NFZ4 105 aa8.15□□□□□ -1.1
CCM2-213ENST00000480658 ATP5G1P05496 136 aa8.15□□□□□ -1.1
CCM2-213ENST00000480658 ATP5G3P48201 142 aa8.15□□□□□ -1.1
CCM2-213ENST00000480658 IL15RAQ13261 267 aa8.15□□□□□ -1.1
CCM2-213ENST00000480658 LGALS9BQ3B8N2 356 aa8.15□□□□□ -1.1
CCM2-213ENST00000480658 MIC13Q5XKP0 118 aa8.15□□□□□ -1.1
CCM2-213ENST00000480658 BAP18Q8IXM2 172 aa8.15□□□□□ -1.1
CCM2-213ENST00000480658 NPCDR1Q9BY65 106 aa8.15□□□□□ -1.1
CCM2-213ENST00000480658 MRPL32Q9BYC8 188 aaKnown RBP8.15□□□□□ -1.1
CCM2-213ENST00000480658 TIMM9Q9Y5J7 89 aa8.15□□□□□ -1.1
CCM2-213ENST00000480658 HYDINQ4G0P3 5121 aa8.15□□□□□ -1.11
CCM2-213ENST00000480658 CBY3A6NI87 242 aa8.14□□□□□ -1.11
CCM2-213ENST00000480658 HIST1H1EP10412 219 aaKnown RBP8.14□□□□□ -1.11
CCM2-213ENST00000480658 IGFL4Q6B9Z1 124 aa8.14□□□□□ -1.11
CCM2-213ENST00000480658 ZNF680Q8NEM1 530 aa8.14□□□□□ -1.11
CCM2-213ENST00000480658 OR5C1Q8NGR4 320 aa8.14□□□□□ -1.11
CCM2-213ENST00000480658 SAT2Q96F10 170 aaPredicted RBP8.14□□□□□ -1.11
CCM2-213ENST00000480658 PYGO2Q9BRQ0 406 aa8.14□□□□□ -1.11
CCM2-213ENST00000480658 KRTAP3-3Q9BYR6 98 aa8.14□□□□□ -1.11
CCM2-213ENST00000480658 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
CCM2-213ENST00000480658 TRBV19A0A075B6N1 114 aa8.13□□□□□ -1.11
CCM2-213ENST00000480658 TRAV12-2A0A075B6T6 113 aa8.13□□□□□ -1.11
CCM2-213ENST00000480658 IGSF23A1L1A6 192 aa8.13□□□□□ -1.11
CCM2-213ENST00000480658 ZNF705GA8MUZ8 300 aaPredicted RBP8.13□□□□□ -1.11
CCM2-213ENST00000480658 SNURFLB1AK76 121 aa8.13□□□□□ -1.11
CCM2-213ENST00000480658 INMT-MINDY4F8WBC2 141 aa8.13□□□□□ -1.11
CCM2-213ENST00000480658 SLC25A5P05141 298 aaKnown RBP8.13□□□□□ -1.11
CCM2-213ENST00000480658 NMBP08949 121 aa8.13□□□□□ -1.11
CCM2-213ENST00000480658 HTN3P15516 51 aa8.13□□□□□ -1.11
CCM2-213ENST00000480658 RNASE8Q8TDE3 154 aaKnown RBP8.13□□□□□ -1.11
CCM2-213ENST00000480658 LINC00477Q96M19 166 aa8.13□□□□□ -1.11
CCM2-213ENST00000480658 ATG101Q9BSB4 218 aa8.13□□□□□ -1.11
CCM2-213ENST00000480658 MARVELD1Q9BSK0 173 aa8.13□□□□□ -1.11
CCM2-213ENST00000480658 TRBV7-9A0A0J9YWB2 115 aa8.12□□□□□ -1.11
CCM2-213ENST00000480658 NPIPB6E9PJ23 425 aa8.12□□□□□ -1.11
CCM2-213ENST00000480658 SSNA1O43805 119 aa8.12□□□□□ -1.11
CCM2-213ENST00000480658 DEFB130BP0DP73 79 aa8.12□□□□□ -1.11
CCM2-213ENST00000480658 DEFB130AP0DP74 79 aa8.12□□□□□ -1.11
CCM2-213ENST00000480658 TAS2R45P59539 299 aa8.12□□□□□ -1.11
CCM2-213ENST00000480658 TMEM88Q6PEY1 159 aa8.12□□□□□ -1.11
CCM2-213ENST00000480658 EPPK1P58107 5090 aaKnown RBP8.12□□□□□ -1.11
CCM2-213ENST00000480658 SLC17A3O00476 420 aa8.11□□□□□ -1.11
CCM2-213ENST00000480658 HTN1P15515 57 aa8.11□□□□□ -1.11
CCM2-213ENST00000480658 CSN1S1P47710 185 aa8.11□□□□□ -1.11
CCM2-213ENST00000480658 CCL18P55774 89 aa8.11□□□□□ -1.11
CCM2-213ENST00000480658 TMEM78Q5T7P6 136 aa8.11□□□□□ -1.11
CCM2-213ENST00000480658 GFI1BQ5VTD9 330 aa8.11□□□□□ -1.11
CCM2-213ENST00000480658 LYPD1Q8N2G4 141 aa8.11□□□□□ -1.11
CCM2-213ENST00000480658 ZNF503Q96F45 646 aa8.11□□□□□ -1.11
CCM2-213ENST00000480658 ATP5SQ99766 215 aa8.11□□□□□ -1.11
CCM2-213ENST00000480658 KMT2AQ03164 3969 aa8.1□□□□□ -1.11
CCM2-213ENST00000480658 F5H768 121 aa8.1□□□□□ -1.11
CCM2-213ENST00000480658 H3BNG1 76 aa8.1□□□□□ -1.11
CCM2-213ENST00000480658 H3BQ15 152 aa8.1□□□□□ -1.11
CCM2-213ENST00000480658 IFNA5P01569 189 aa8.1□□□□□ -1.11
CCM2-213ENST00000480658 LRRC37A5PQ49AS3 106 aa8.1□□□□□ -1.11
CCM2-213ENST00000480658 KHDC3LQ587J8 217 aa8.1□□□□□ -1.11
CCM2-213ENST00000480658 DMRTA1Q5VZB9 504 aa8.1□□□□□ -1.11
CCM2-213ENST00000480658 SCGB1C1Q8TD33 95 aa8.1□□□□□ -1.11
CCM2-213ENST00000480658 PPP1R1CQ8WVI7 109 aa8.1□□□□□ -1.11
CCM2-213ENST00000480658 LINC00467Q9BRT7 94 aa8.1□□□□□ -1.11
CCM2-213ENST00000480658 WDR61Q9GZS3 305 aaKnown RBP8.1□□□□□ -1.11
CCM2-213ENST00000480658 ZNF586Q9NXT0 402 aa8.1□□□□□ -1.11
CCM2-213ENST00000480658 PLAC8L1A1L4L8 177 aa8.09□□□□□ -1.11
CCM2-213ENST00000480658 DAZ2Q13117 558 aaKnown RBP8.09□□□□□ -1.11
CCM2-213ENST00000480658 CLINT1Q14677 625 aa8.09□□□□□ -1.11
CCM2-213ENST00000480658 FAM74A1Q5RGS3 127 aa8.09□□□□□ -1.11
CCM2-213ENST00000480658 MORN5Q5VZ52 161 aa8.09□□□□□ -1.11
CCM2-213ENST00000480658 C9orf47Q6ZRZ4 202 aa8.09□□□□□ -1.11
CCM2-213ENST00000480658 THAP6Q8TBB0 222 aa8.09□□□□□ -1.11
CCM2-213ENST00000480658 ASB13Q8WXK3 278 aa8.09□□□□□ -1.11
CCM2-213ENST00000480658 PARD6GQ9BYG4 376 aaPredicted RBP8.09□□□□□ -1.11
CCM2-213ENST00000480658 OR51M1Q9H341 326 aa8.09□□□□□ -1.11
CCM2-213ENST00000480658 FUT9Q9Y231 359 aa8.09□□□□□ -1.11
CCM2-213ENST00000480658 C7orf71A4D174 169 aa8.08□□□□□ -1.12
CCM2-213ENST00000480658 RBAKDNA6NC62 111 aa8.08□□□□□ -1.12
CCM2-213ENST00000480658 KLLNB2CW77 178 aa8.08□□□□□ -1.12
CCM2-213ENST00000480658 NBEAP1P0C6P0 100 aa8.08□□□□□ -1.12
CCM2-213ENST00000480658 M6PRP20645 277 aa8.08□□□□□ -1.12
CCM2-213ENST00000480658 NHLH2Q02577 135 aa8.08□□□□□ -1.12
CCM2-213ENST00000480658 LINC00612Q8N6U2 182 aa8.08□□□□□ -1.12
CCM2-213ENST00000480658 RXFP4Q8TDU9 374 aa8.08□□□□□ -1.12
CCM2-213ENST00000480658 C18orf15Q96N68 181 aa8.08□□□□□ -1.12
CCM2-213ENST00000480658 PAXXQ9BUH6 204 aa8.08□□□□□ -1.12
CCM2-213ENST00000480658 NOP10Q9NPE3 64 aaKnown RBP8.08□□□□□ -1.12
CCM2-213ENST00000480658 TRAV5A0A0B4J249 113 aa8.07□□□□□ -1.12
CCM2-213ENST00000480658 OR7C2O60412 319 aa8.07□□□□□ -1.12
CCM2-213ENST00000480658 MPC2O95563 127 aa8.07□□□□□ -1.12
CCM2-213ENST00000480658 GPX1P07203 203 aa8.07□□□□□ -1.12
CCM2-213ENST00000480658 CT45A10P0DMU9 189 aa8.07□□□□□ -1.12
CCM2-213ENST00000480658 CRISP2P16562 243 aa8.07□□□□□ -1.12
CCM2-213ENST00000480658 AZU1P20160 251 aa8.07□□□□□ -1.12
CCM2-213ENST00000480658 BTF3P20290 206 aaKnown RBP8.07□□□□□ -1.12
CCM2-213ENST00000480658 H2BFSP57053 126 aa8.07□□□□□ -1.12
CCM2-213ENST00000480658 ZNF266Q14584 549 aa8.07□□□□□ -1.12
CCM2-213ENST00000480658 ANXA2RQ3ZCQ2 193 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms