RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 C11orf52Q96A22 123 aa13.25□□□□□ -0.29
SH3D21-203ENST00000480549 AJUBAQ96IF1 538 aa13.25□□□□□ -0.29
SH3D21-203ENST00000480549 ZNF479Q96JC4 524 aa13.25□□□□□ -0.29
SH3D21-203ENST00000480549 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.24□□□□□ -0.29
SH3D21-203ENST00000480549 LEPROTL1O95214 131 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 TRGV9Q99603 122 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 A0A1W2PPM0 123 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 HELTA6NFD8 242 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 EBI3Q14213 229 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 HES1Q14469 280 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 C5orf64Q2M2E5 130 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 CSMD1Q96PZ7 3565 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 FLNCQ14315 2725 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 COX7A2P2O60397 106 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 CNIH1O95406 144 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 ADAMTSL5Q6ZMM2 481 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 OR1L4Q8NGR5 311 aa13.24□□□□□ -0.29
SH3D21-203ENST00000480549 C9JCJ5 164 aa13.23□□□□□ -0.29
SH3D21-203ENST00000480549 I3L2K1 104 aa13.23□□□□□ -0.29
SH3D21-203ENST00000480549 C10orf113Q5VZT2 155 aa13.23□□□□□ -0.29
SH3D21-203ENST00000480549 AKAP6Q13023 2319 aa13.23□□□□□ -0.29
SH3D21-203ENST00000480549 TCTEX1D4Q5JR98 221 aa13.23□□□□□ -0.29
SH3D21-203ENST00000480549 FAM120AOSQ5T036 256 aa13.23□□□□□ -0.29
SH3D21-203ENST00000480549 IBA57Q5T440 356 aaKnown RBP13.23□□□□□ -0.29
SH3D21-203ENST00000480549 GDF5OSQ5U4N7 250 aa13.23□□□□□ -0.29
SH3D21-203ENST00000480549 NHLRC2Q8NBF2 726 aa13.23□□□□□ -0.29
SH3D21-203ENST00000480549 UBE2E1P51965 193 aa13.22□□□□□ -0.29
SH3D21-203ENST00000480549 FOXA3P55318 350 aaPredicted RBP13.22□□□□□ -0.29
SH3D21-203ENST00000480549 FAM168AQ92567 244 aa13.22□□□□□ -0.29
SH3D21-203ENST00000480549 ZNF355PQ9NSJ1 428 aa13.22□□□□□ -0.29
SH3D21-203ENST00000480549 WNK2Q9Y3S1 2297 aa13.22□□□□□ -0.29
SH3D21-203ENST00000480549 PRB1P04280 392 aa13.22□□□□□ -0.29
SH3D21-203ENST00000480549 FABP2P12104 132 aa13.22□□□□□ -0.29
SH3D21-203ENST00000480549 TIGITQ495A1 244 aa13.22□□□□□ -0.29
SH3D21-203ENST00000480549 URB1-AS1Q96HZ7 61 aa13.22□□□□□ -0.29
SH3D21-203ENST00000480549 CCL19Q99731 98 aa13.22□□□□□ -0.29
SH3D21-203ENST00000480549 DOPEY1Q5JWR5 2465 aa13.22□□□□□ -0.29
SH3D21-203ENST00000480549 BBC3Q96PG8 261 aaPredicted RBP13.22□□□□□ -0.29
SH3D21-203ENST00000480549 IZUMO1RA6ND01 250 aa13.21□□□□□ -0.29
SH3D21-203ENST00000480549 GGTLC3B5MD39 225 aa13.21□□□□□ -0.29
SH3D21-203ENST00000480549 ATP5G2Q06055 141 aa13.21□□□□□ -0.29
SH3D21-203ENST00000480549 ABCA2Q9BZC7 2435 aa13.21□□□□□ -0.29
SH3D21-203ENST00000480549 IGHV1-24A0A0C4DH33 117 aa13.21□□□□□ -0.3
SH3D21-203ENST00000480549 COX8AP10176 69 aa13.21□□□□□ -0.3
SH3D21-203ENST00000480549 CRXO43186 299 aaPredicted RBP13.2□□□□□ -0.3
SH3D21-203ENST00000480549 OSTCQ9NRP0 149 aa13.2□□□□□ -0.3
SH3D21-203ENST00000480549 RABAC1Q9UI14 185 aa13.2□□□□□ -0.3
SH3D21-203ENST00000480549 USP9XQ93008 2570 aaPredicted RBP13.2□□□□□ -0.3
SH3D21-203ENST00000480549 A0A1W2PRE2 83 aa13.2□□□□□ -0.3
SH3D21-203ENST00000480549 SMIM27A0A1W2PRY6 76 aa13.2□□□□□ -0.3
SH3D21-203ENST00000480549 K7EIM0 57 aa13.2□□□□□ -0.3
SH3D21-203ENST00000480549 PYYP10082 97 aa13.2□□□□□ -0.3
SH3D21-203ENST00000480549 NDPQ00604 133 aa13.2□□□□□ -0.3
SH3D21-203ENST00000480549 LINC00305Q7Z4B0 112 aa13.2□□□□□ -0.3
SH3D21-203ENST00000480549 MS4A6AQ9H2W1 248 aa13.2□□□□□ -0.3
SH3D21-203ENST00000480549 MED13LQ71F56 2210 aa13.19□□□□□ -0.3
SH3D21-203ENST00000480549 UBE2L3P68036 154 aaKnown RBP13.19□□□□□ -0.3
SH3D21-203ENST00000480549 ZNF562Q6V9R5 426 aa13.19□□□□□ -0.3
SH3D21-203ENST00000480549 FA2HQ7L5A8 372 aa13.19□□□□□ -0.3
SH3D21-203ENST00000480549 MAP1LC3CQ9BXW4 147 aa13.19□□□□□ -0.3
SH3D21-203ENST00000480549 PGPEP1Q9NXJ5 209 aa13.19□□□□□ -0.3
SH3D21-203ENST00000480549 LY96Q9Y6Y9 160 aa13.19□□□□□ -0.3
SH3D21-203ENST00000480549 J3QR89 54 aa13.19□□□□□ -0.3
SH3D21-203ENST00000480549 SAA4P35542 130 aa13.19□□□□□ -0.3
SH3D21-203ENST00000480549 KLF5Q13887 457 aaPredicted RBP13.19□□□□□ -0.3
SH3D21-203ENST00000480549 TM4SF20Q53R12 229 aa13.19□□□□□ -0.3
SH3D21-203ENST00000480549 NCBP2LA6PVI3 153 aaKnown RBP13.18□□□□□ -0.3
SH3D21-203ENST00000480549 ORM2P19652 201 aa13.18□□□□□ -0.3
SH3D21-203ENST00000480549 HERV-K104P63124 156 aa13.18□□□□□ -0.3
SH3D21-203ENST00000480549 FXYD5Q96DB9 178 aa13.18□□□□□ -0.3
SH3D21-203ENST00000480549 CACNA1BQ00975 2339 aa13.18□□□□□ -0.3
SH3D21-203ENST00000480549 VWC2LB2RUY7 222 aa13.18□□□□□ -0.3
SH3D21-203ENST00000480549 C10orf105Q8TEF2 133 aa13.18□□□□□ -0.3
SH3D21-203ENST00000480549 PAXXQ9BUH6 204 aa13.18□□□□□ -0.3
SH3D21-203ENST00000480549 IGHV4-61A0A0C4DH41 118 aa13.18□□□□□ -0.3
SH3D21-203ENST00000480549 SAMD5Q5TGI4 173 aa13.18□□□□□ -0.3
SH3D21-203ENST00000480549 ARPC1AQ92747 370 aa13.18□□□□□ -0.3
SH3D21-203ENST00000480549 SPATA25Q9BR10 227 aa13.18□□□□□ -0.3
SH3D21-203ENST00000480549 PIMREGQ9BSJ6 248 aa13.18□□□□□ -0.3
SH3D21-203ENST00000480549 WFDC2Q14508 124 aa13.17□□□□□ -0.3
SH3D21-203ENST00000480549 SH2D6Q7Z4S9 175 aa13.17□□□□□ -0.3
SH3D21-203ENST00000480549 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
SH3D21-203ENST00000480549 NPIPB5A8MRT5 1133 aa13.17□□□□□ -0.3
SH3D21-203ENST00000480549 ZNF138P52744 262 aa13.17□□□□□ -0.3
SH3D21-203ENST00000480549 KLF17Q5JT82 389 aaPredicted RBP13.17□□□□□ -0.3
SH3D21-203ENST00000480549 Q8N9W7 124 aa13.17□□□□□ -0.3
SH3D21-203ENST00000480549 ZFHX3Q15911 3703 aa13.16□□□□□ -0.3
SH3D21-203ENST00000480549 TMEM189A5PLL7 270 aa13.16□□□□□ -0.3
SH3D21-203ENST00000480549 IGKV1-17P01599 117 aa13.16□□□□□ -0.3
SH3D21-203ENST00000480549 FCGR2BP31994 310 aaPredicted RBP13.16□□□□□ -0.3
SH3D21-203ENST00000480549 PAX8Q06710 450 aa13.16□□□□□ -0.3
SH3D21-203ENST00000480549 FANCD2OSQ96PS1 177 aa13.16□□□□□ -0.3
SH3D21-203ENST00000480549 SPAG8Q99932 426 aaPredicted RBP13.16□□□□□ -0.3
SH3D21-203ENST00000480549 C1RLQ9NZP8 487 aa13.16□□□□□ -0.3
SH3D21-203ENST00000480549 PSG8Q9UQ74 426 aa13.16□□□□□ -0.3
SH3D21-203ENST00000480549 CENPVL3A0A0U1RRI6 287 aa13.16□□□□□ -0.3
SH3D21-203ENST00000480549 NPFFO15130 113 aa13.16□□□□□ -0.3
SH3D21-203ENST00000480549 FAM106CPP0CH98 169 aa13.16□□□□□ -0.3
SH3D21-203ENST00000480549 RNF183Q96D59 192 aa13.16□□□□□ -0.3
SH3D21-203ENST00000480549 UTP20O75691 2785 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms