RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 Q9H3A6 140 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 TMEM167BQ9NRX6 74 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 SIGLEC8Q9NYZ4 499 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 TRAV8-2A0A0B4J237 113 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 TRAV1-1A0A0B4J248 108 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 GGTLC3B5MD39 225 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 F6UB75 175 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 CD7P09564 240 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 PSMB3P49720 205 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 CEBPGP53567 150 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 LCN12Q6JVE5 192 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 RXFP4Q8TDU9 374 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 C20orf173Q96LM9 149 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 MCRIP2Q9BUT9 160 aaKnown RBP4.81□□□□□ -1.64
HERC4-210ENST00000480158 WFDC10AQ9H1F0 79 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 ZNF331Q9NQX6 463 aaPredicted RBP4.81□□□□□ -1.64
HERC4-210ENST00000480158 FAM74A7A6NL05 159 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 K7EQG2 157 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 IGKV3-20P01619 116 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 PRB2P02812 416 aaPredicted RBP4.8□□□□□ -1.64
HERC4-210ENST00000480158 INSL3P51460 131 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 SRSF3P84103 164 aaKnown RBP4.8□□□□□ -1.64
HERC4-210ENST00000480158 GUK1Q16774 197 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 CLLU1Q5K131 121 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 ZNF738Q8NE65 137 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 PRR25Q96S07 402 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 ASCL2Q99929 193 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 AAMDCQ9H7C9 122 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 ZNF256Q9Y2P7 627 aaPredicted RBP4.8□□□□□ -1.64
HERC4-210ENST00000480158 A0A087X0K7 114 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 RBFOX3A6NFN3 312 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 OR4C46A6NHA9 309 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 C11orf94C9JXX5 98 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 PRAC2D3DTV9 90 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 SOCS3O14543 225 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 SLC25A5P05141 298 aaKnown RBP4.8□□□□□ -1.64
HERC4-210ENST00000480158 CD5P06127 495 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 DEFB131AP59861 70 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 CD81P60033 236 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 SNRPD3P62318 126 aaKnown RBP4.8□□□□□ -1.64
HERC4-210ENST00000480158 PSG9Q00887 426 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 LYPD6BQ8NI32 183 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 CMTM2Q8TAZ6 248 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 LINC00479Q96M42 142 aa4.8□□□□□ -1.64
HERC4-210ENST00000480158 SPAG8Q99932 426 aaPredicted RBP4.8□□□□□ -1.64
HERC4-210ENST00000480158 MGAM2Q2M2H8 2515 aa4.79□□□□□ -1.64
HERC4-210ENST00000480158 NOTCH1P46531 2555 aa4.79□□□□□ -1.64
HERC4-210ENST00000480158 IGKV2-40A0A087WW87 121 aaPredicted RBP4.79□□□□□ -1.64
HERC4-210ENST00000480158 KNCNA6PVL3 124 aa4.79□□□□□ -1.64
HERC4-210ENST00000480158 ISLRO14498 428 aa4.79□□□□□ -1.64
HERC4-210ENST00000480158 IGKV2D-40P01614 121 aaPredicted RBP4.79□□□□□ -1.64
HERC4-210ENST00000480158 BCL2P10415 239 aa4.79□□□□□ -1.64
HERC4-210ENST00000480158 ID1P41134 155 aa4.79□□□□□ -1.64
HERC4-210ENST00000480158 MEOX2P50222 304 aa4.79□□□□□ -1.64
HERC4-210ENST00000480158 KRTAP10-11P60412 298 aa4.79□□□□□ -1.64
HERC4-210ENST00000480158 KRTAP21-3Q3LHN1 58 aa4.79□□□□□ -1.64
HERC4-210ENST00000480158 GDF5OSQ5U4N7 250 aa4.79□□□□□ -1.64
HERC4-210ENST00000480158 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
HERC4-210ENST00000480158 SORL1Q92673 2214 aa4.79□□□□□ -1.64
HERC4-210ENST00000480158 TRAV8-1A0A0A6YYK1 113 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 TRAV34A0A0B4J273 112 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 TRAV25A0A0B4J276 109 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 A0A1W2PRE2 83 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 IFNA1P01562 189 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 MEF2BQ02080 365 aaPredicted RBP4.78□□□□□ -1.64
HERC4-210ENST00000480158 ERCC8Q13216 396 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 PDE6HQ13956 83 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 PSG3Q16557 428 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 ODF3L2Q3SX64 289 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 ACTL10Q5JWF8 245 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 GOLT1AQ6ZVE7 132 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 SUN5Q8TC36 379 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 RPUSD4Q96CM3 377 aaKnown RBP4.78□□□□□ -1.64
HERC4-210ENST00000480158 SLC50A1Q9BRV3 221 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 MAP6D1Q9H9H5 199 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 MANBALQ9NQG1 85 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 OTORQ9NRC9 128 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 NBEAL1Q6ZS30 2694 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 LOC102723971A0A1B0GUV8 181 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 SCO2A0A1W2PP80 73 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 OR11H12B2RN74 326 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 C9JQL5 133 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 CSN1S1P47710 185 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 HIST1H1AQ02539 215 aaPredicted RBP4.78□□□□□ -1.64
HERC4-210ENST00000480158 GTSCR1Q86UQ5 136 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 DEFB125Q8N687 156 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 OR4B1Q8NGF8 309 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 TREM1Q9NP99 234 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 ZMAT5Q9UDW3 170 aaKnown RBP4.78□□□□□ -1.64
HERC4-210ENST00000480158 VAX2Q9UIW0 290 aa4.78□□□□□ -1.64
HERC4-210ENST00000480158 PPT1P50897 306 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 ZNF674Q2M3X9 581 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 BEAN1Q3B7T3 259 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 COMMD7Q86VX2 200 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 OR2K2Q8NGT1 345 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 Q8TAT8 98 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 VGLL1Q99990 258 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 DERL1Q9BUN8 251 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 EPDR1Q9UM22 224 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 DIRC3C9JPN6 131 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms