RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 CCL21O00585 134 aa8.66□□□□□ -1.02
CHD6-208ENST00000480022 ARMS2P0C7Q2 107 aa8.66□□□□□ -1.02
CHD6-208ENST00000480022 PPIFP30405 207 aaKnown RBP8.66□□□□□ -1.02
CHD6-208ENST00000480022 CD69Q07108 199 aa8.66□□□□□ -1.02
CHD6-208ENST00000480022 C2orf83Q53S99 150 aa8.66□□□□□ -1.02
CHD6-208ENST00000480022 PRELID3AQ96N28 172 aa8.66□□□□□ -1.02
CHD6-208ENST00000480022 TTTY13Q9BZ97 58 aa8.66□□□□□ -1.02
CHD6-208ENST00000480022 NPIPB5A8MRT5 1133 aa8.66□□□□□ -1.02
CHD6-208ENST00000480022 K7EMI3 77 aa8.66□□□□□ -1.02
CHD6-208ENST00000480022 WNT9BO14905 357 aa8.66□□□□□ -1.02
CHD6-208ENST00000480022 RPL32P62910 135 aaKnown RBP8.66□□□□□ -1.02
CHD6-208ENST00000480022 RRN3P1Q2M238 152 aa8.66□□□□□ -1.02
CHD6-208ENST00000480022 A0A0G2JNJ9 132 aa8.65□□□□□ -1.02
CHD6-208ENST00000480022 NDUFS7O75251 213 aa8.65□□□□□ -1.02
CHD6-208ENST00000480022 TFF1P04155 84 aa8.65□□□□□ -1.02
CHD6-208ENST00000480022 FXYD7P58549 80 aa8.65□□□□□ -1.02
CHD6-208ENST00000480022 PRCDQ00LT1 54 aa8.65□□□□□ -1.02
CHD6-208ENST00000480022 FHL3Q13643 280 aa8.65□□□□□ -1.02
CHD6-208ENST00000480022 PATE2Q6UY27 113 aa8.65□□□□□ -1.02
CHD6-208ENST00000480022 DCTN5Q9BTE1 182 aa8.65□□□□□ -1.02
CHD6-208ENST00000480022 Q9UFV3 132 aa8.65□□□□□ -1.02
CHD6-208ENST00000480022 CHD6Q8TD26 2715 aa8.65□□□□□ -1.02
CHD6-208ENST00000480022 COL6A6A6NMZ7 2263 aa8.65□□□□□ -1.02
CHD6-208ENST00000480022 OVOL3O00110 214 aa8.65□□□□□ -1.03
CHD6-208ENST00000480022 ZFAND6Q6FIF0 208 aa8.65□□□□□ -1.03
CHD6-208ENST00000480022 CNEP1R1Q8N9A8 125 aa8.65□□□□□ -1.03
CHD6-208ENST00000480022 C8orf46Q8TAG6 207 aa8.65□□□□□ -1.03
CHD6-208ENST00000480022 HEATR1Q9H583 2144 aaKnown RBP8.65□□□□□ -1.03
CHD6-208ENST00000480022 SHISA9B4DS77 424 aa8.64□□□□□ -1.03
CHD6-208ENST00000480022 CFHR2P36980 270 aa8.64□□□□□ -1.03
CHD6-208ENST00000480022 TAL2Q16559 108 aa8.64□□□□□ -1.03
CHD6-208ENST00000480022 Q6AWC8 147 aa8.64□□□□□ -1.03
CHD6-208ENST00000480022 SMIM20Q8N5G0 67 aa8.64□□□□□ -1.03
CHD6-208ENST00000480022 RND1Q92730 232 aa8.64□□□□□ -1.03
CHD6-208ENST00000480022 FAM90A1Q86YD7 464 aa8.64□□□□□ -1.03
CHD6-208ENST00000480022 OR1L8Q8NGR8 309 aa8.64□□□□□ -1.03
CHD6-208ENST00000480022 SVILO95425 2214 aa8.64□□□□□ -1.03
CHD6-208ENST00000480022 DYSFO75923 2080 aa8.64□□□□□ -1.03
CHD6-208ENST00000480022 PRSS29PA6NIE9 313 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 D6R8Y8 96 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 PLAUP00749 431 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 IGHV3-13P01766 116 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 TCRAP04437 139 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 RNASE2P10153 161 aaKnown RBP8.63□□□□□ -1.03
CHD6-208ENST00000480022 ADORA2A-AS1P86434 159 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 NFE4Q86UQ8 179 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 TEX29Q8N6K0 151 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 PTH2Q96A98 100 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 FSTL3O95633 263 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 CFAP126Q5VTH2 177 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 LINC00305Q7Z4B0 112 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 CIARTQ8N365 385 aaPredicted RBP8.63□□□□□ -1.03
CHD6-208ENST00000480022 SRSF12Q8WXF0 261 aaKnown RBP8.63□□□□□ -1.03
CHD6-208ENST00000480022 METRNQ9UJH8 293 aa8.63□□□□□ -1.03
CHD6-208ENST00000480022 WI2-2373I1.2A0A1W2PRP0 233 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 HOXA4Q00056 320 aaPredicted RBP8.62□□□□□ -1.03
CHD6-208ENST00000480022 EDDM3AQ14507 147 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 ZNF826PQ6ZT77 177 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 CXorf67Q86X51 503 aaPredicted RBP8.62□□□□□ -1.03
CHD6-208ENST00000480022 HHLA3Q9XRX5 114 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 ZNF134P52741 427 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 PAX8Q06710 450 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 Q86TA4 180 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 RITA1Q96K30 269 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 ZMAT4Q9H898 229 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 PROCRQ9UNN8 238 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 HLA-DRB4P13762 266 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 SMCPP49901 116 aaPredicted RBP8.62□□□□□ -1.03
CHD6-208ENST00000480022 POU2AF1Q16633 256 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 KLF17Q5JT82 389 aaPredicted RBP8.62□□□□□ -1.03
CHD6-208ENST00000480022 C1orf229Q6ZS94 237 aaPredicted RBP8.62□□□□□ -1.03
CHD6-208ENST00000480022 WFDC3Q8IUB2 231 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 ORMDL3Q8N138 153 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 U3KQK5 164 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 HLA-DRB4X5D2U9 266 aa8.62□□□□□ -1.03
CHD6-208ENST00000480022 FAM90A27PA6NNH2 459 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 UPK2O00526 184 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 ZNF493Q6ZR52 646 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 PPDPFLQ8WWR9 84 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 POLEQ07864 2286 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 ZNF462Q96JM2 2506 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 FAM208BQ5VWN6 2430 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 TMEM213A2RRL7 107 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 IGKCP01834 107 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 THBDP07204 575 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 NHLRC4P0CG21 123 aaPredicted RBP8.61□□□□□ -1.03
CHD6-208ENST00000480022 PLA2G2AP14555 144 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 EVI2AP22794 236 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 MPV17P39210 176 aa8.61□□□□□ -1.03
CHD6-208ENST00000480022 CDSNQ15517 529 aa8.6□□□□□ -1.03
CHD6-208ENST00000480022 ZNF474Q6S9Z5 364 aaPredicted RBP8.6□□□□□ -1.03
CHD6-208ENST00000480022 GTSCR1Q86UQ5 136 aa8.6□□□□□ -1.03
CHD6-208ENST00000480022 DLX4Q92988 240 aaPredicted RBP8.6□□□□□ -1.03
CHD6-208ENST00000480022 FLYWCH2Q96CP2 140 aaKnown RBP8.6□□□□□ -1.03
CHD6-208ENST00000480022 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
CHD6-208ENST00000480022 Q9H3A6 140 aa8.6□□□□□ -1.03
CHD6-208ENST00000480022 TNCP24821 2201 aa8.6□□□□□ -1.03
CHD6-208ENST00000480022 ZGRF1Q86YA3 2104 aa8.6□□□□□ -1.03
CHD6-208ENST00000480022 TRAV8-1A0A0A6YYK1 113 aa8.6□□□□□ -1.03
CHD6-208ENST00000480022 GAGE12JA6NER3 117 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 203 ms