RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 KRASP01116 189 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 IGLV1-51P01701 117 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 SLC25A6P12236 298 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 PSMB3P49720 205 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 FXYD4P59646 89 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 ERVK-16P61578 105 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 KLF5Q13887 457 aaPredicted RBP5.06□□□□□ -1.6
VCP-205ENST00000479300 COX19Q49B96 90 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 CST9LP1Q5W188 147 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 TTC9CQ8N5M4 171 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 ZNF709Q8N972 641 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 Q8N976 141 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 OR2K2Q8NGT1 345 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 OR4A5Q8NH83 315 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 SCGB1C1Q8TD33 95 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 VN1R17PQ8TDU5 208 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 TMEM222Q9H0R3 208 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 MRPL18Q9H0U6 180 aaKnown RBP5.06□□□□□ -1.6
VCP-205ENST00000479300 PARLQ9H300 379 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 RETNQ9HD89 108 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 RPRMQ9NS64 109 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 ZNF257Q9Y2Q1 563 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 HECTD4Q9Y4D8 3996 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 IGLC7A0M8Q6 106 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 ZNF320A2RRD8 509 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 A8MZ25 164 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 TNFSF12O43508 249 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 SSSCA1O60232 199 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 NUPR1O60356 82 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 ZNF253O75346 499 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 OR2J3O76001 311 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 PPYP01298 95 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 CRISP2P16562 243 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 TSPOP30536 169 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 GNRHRP30968 328 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 ADMP35318 185 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 FGF8P55075 233 aaPredicted RBP5.05□□□□□ -1.6
VCP-205ENST00000479300 RPL30P62888 115 aaKnown RBP5.05□□□□□ -1.6
VCP-205ENST00000479300 RPL8P62917 257 aaKnown RBP5.05□□□□□ -1.6
VCP-205ENST00000479300 ZNF726P1Q15940 193 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 PMCHL1Q16048 86 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 PSG3Q16557 428 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 TDRG1Q3Y452 100 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 FAM106AQ4KMX7 169 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 FAM78BQ5VT40 261 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 PRR27Q6MZM9 219 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 LCN15Q6UWW0 184 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 C19orf35Q6ZS72 473 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 TMEM217Q8N7C4 229 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 TMEM167AQ8TBQ9 72 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 EEF1AKMT3Q96AZ1 226 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 C5orf30Q96GV9 206 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 CLUHP3Q96NS8 147 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 RAB40CQ96S21 281 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 COMMD5Q9GZQ3 224 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 CCL28Q9NRJ3 127 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 THYN1Q9P016 225 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 FBXL7Q9UJT9 491 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 TP53TG3Q9ULZ0 132 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 RFNGQ9Y644 331 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 TNCP24821 2201 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 KMT2AQ03164 3969 aa5.05□□□□□ -1.6
VCP-205ENST00000479300 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.04□□□□□ -1.6
VCP-205ENST00000479300 IGKV1D-13A0A0B4J2D9 117 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 C3orf85A0A1B0GTC6 90 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 CTXND1A0A1B0GTU2 59 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 RBMY1BA6NDE4 496 aaKnown RBP5.04□□□□□ -1.6
VCP-205ENST00000479300 RBMY1EA6NEQ0 496 aaKnown RBP5.04□□□□□ -1.6
VCP-205ENST00000479300 NPIPB5A8MRT5 1133 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 C17orf112F2Z3M2 114 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 SERF1AO75920 110 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 MT-ND6P03923 174 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 RBMY1DP0C7P1 496 aaKnown RBP5.04□□□□□ -1.6
VCP-205ENST00000479300 IGKV1-13P0DP09 117 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 ARL3P36405 182 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 LINC00310P59036 64 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 RHOBP62745 196 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 VAMP3Q15836 100 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 C15orf32Q32M92 178 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 SP6Q3SY56 376 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 NMSQ5H8A3 153 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 OR10J3Q5JRS4 329 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 OR4A47Q6IF82 309 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 SELENOHQ8IZQ5 122 aaKnown RBP5.04□□□□□ -1.6
VCP-205ENST00000479300 VKORC1L1Q8N0U8 176 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 SPATA25Q9BR10 227 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 TXNDC17Q9BRA2 123 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 SAMD10Q9BYL1 202 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 SLC39A9Q9NUM3 307 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 SIGLEC8Q9NYZ4 499 aa5.04□□□□□ -1.6
VCP-205ENST00000479300 TRBV7-1A0A0A6YYK4 115 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 RBFOX2O43251 390 aaKnown RBP eCLIP5.03□□□□□ -1.6
VCP-205ENST00000479300 PDE6DO43924 150 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 CST7O76096 145 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 GPX1P07203 203 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 CSN3P07498 182 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 PAX9P55771 341 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 HBG1P69891 147 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 HBG2P69892 147 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 SSBP2P81877 361 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms